RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 TIMM29Q9BSF4 260 aa10.06□□□□□ -0.8
CLIP4-204ENST00000404424 ACTRT3Q9BYD9 372 aa10.06□□□□□ -0.8
CLIP4-204ENST00000404424 WDR26Q9H7D7 661 aa10.06□□□□□ -0.8
CLIP4-204ENST00000404424 KRCC1Q9NPI7 259 aaPredicted RBP10.06□□□□□ -0.8
CLIP4-204ENST00000404424 PRSS16Q9NQE7 514 aa10.06□□□□□ -0.8
CLIP4-204ENST00000404424 PDE4DIPQ5VU43 2346 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 C4orf51C9J302 202 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 KLF4O43474 513 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 HPGDSO60760 199 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 KCNJ13O60928 360 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 LALBAP00709 142 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 ALPPL2P10696 532 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 GNSP15586 552 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 CELP19835 753 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 ERP29P30040 261 aaKnown RBP10.05□□□□□ -0.8
CLIP4-204ENST00000404424 SSTR4P31391 388 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 TRHRP34981 398 aaPredicted RBP10.05□□□□□ -0.8
CLIP4-204ENST00000404424 CTNNB1P35222 781 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 VIPR2P41587 438 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 IL12RB1P42701 662 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 CAV3P56539 151 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 RGS8P57771 180 aaPredicted RBP10.05□□□□□ -0.8
CLIP4-204ENST00000404424 IL18Q14116 193 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 SF3A2Q15428 464 aaKnown RBP10.05□□□□□ -0.8
CLIP4-204ENST00000404424 ZNF750Q32MQ0 723 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 YIF1BQ5BJH7 314 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 SLC30A6Q6NXT4 461 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 PLEKHM3Q6ZWE6 761 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 MBOAT2Q6ZWT7 520 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 SHFQ7M4L6 423 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 C16orf62Q7Z3J2 963 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 PEX5LQ8IYB4 626 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 OR2T33Q8NG76 320 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 OR4F15Q8NGB8 312 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 OR4Q3Q8NH05 313 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 UBASH3BQ8TF42 649 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 TRIM63Q969Q1 353 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 OTULINQ96BN8 352 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 ZNF707Q96C28 371 aaPredicted RBP10.05□□□□□ -0.8
CLIP4-204ENST00000404424 FYTTD1Q96QD9 318 aaKnown RBP10.05□□□□□ -0.8
CLIP4-204ENST00000404424 KCNJ15Q99712 375 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 ZNF649Q9BS31 505 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 TRAF4Q9BUZ4 470 aaPredicted RBP10.05□□□□□ -0.8
CLIP4-204ENST00000404424 PRR14Q9BWN1 585 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 OSGEPL1Q9H4B0 414 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 XKR8Q9H6D3 395 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 IMP3Q9NV31 184 aaKnown RBP10.05□□□□□ -0.8
CLIP4-204ENST00000404424 LYARQ9NX58 379 aaKnown RBP10.05□□□□□ -0.8
CLIP4-204ENST00000404424 DPP7Q9UHL4 492 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 GPR55Q9Y2T6 319 aaPredicted RBP10.05□□□□□ -0.8
CLIP4-204ENST00000404424 ZNF780BQ9Y6R6 833 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 A0A0B4J293 547 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 SMIM30A4D0T7 59 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 SGK494L7N484 410 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 LRRTM2O43300 516 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 LYRM1O43325 122 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 FRS3O43559 492 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 PRICKLE3O43900 615 aaPredicted RBP10.05□□□□□ -0.8
CLIP4-204ENST00000404424 PCDH8O95206 1070 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 AGR2O95994 175 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 C8orf89P0DMQ9 161 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 ALAS2P22557 587 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 SOX18P35713 384 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 CD79BP40259 229 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 MC3RP41968 323 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 AVPR1BP47901 424 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 RNF144AP50876 292 aaPredicted RBP10.05□□□□□ -0.8
CLIP4-204ENST00000404424 KRT33BQ14525 404 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 TATDN3Q17R31 274 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 UAP1L1Q3KQV9 507 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 C18orf63Q68DL7 685 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 ZNF620Q6ZNG0 422 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 ZNF438Q7Z4V0 828 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 MEX3DQ86XN8 651 aaKnown RBP10.05□□□□□ -0.8
CLIP4-204ENST00000404424 NKAIN4Q8IVV8 208 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 ZFP41Q8N8Y5 198 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 ADAMTS15Q8TE58 950 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 ZG16BQ96DA0 208 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 RNF31Q96EP0 1072 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 SLC41A3Q96GZ6 507 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 ZNF681Q96N22 645 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 SECISBP2Q96T21 854 aaKnown RBP10.05□□□□□ -0.8
CLIP4-204ENST00000404424 MCHR1Q99705 422 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 TMEM43Q9BTV4 400 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 TMED9Q9BVK6 235 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 GON7Q9BXV9 100 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 HDHD5Q9BXW7 423 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 C11orf49Q9H6J7 331 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 TBC1D17Q9HA65 648 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 PHPT1Q9NRX4 125 aaPredicted RBP10.05□□□□□ -0.8
CLIP4-204ENST00000404424 CBLCQ9ULV8 474 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 CHST2Q9Y4C5 530 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 CDH10Q9Y6N8 788 aa10.05□□□□□ -0.8
CLIP4-204ENST00000404424 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.04□□□□□ -0.8
CLIP4-204ENST00000404424 FAM240BA0A1B0GVZ2 78 aa10.04□□□□□ -0.8
CLIP4-204ENST00000404424 TBC1D3BA6NDS4 549 aa10.04□□□□□ -0.8
CLIP4-204ENST00000404424 OTOL1A6NHN0 477 aaPredicted RBP10.04□□□□□ -0.8
CLIP4-204ENST00000404424 CH25HO95992 272 aa10.04□□□□□ -0.8
CLIP4-204ENST00000404424 FAM157BP0CG42 384 aa10.04□□□□□ -0.8
CLIP4-204ENST00000404424 PSKH1P11801 424 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms