RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 HCN1O60741 890 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 PEX11AO75192 247 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 BCAS2O75934 225 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 SNX4O95219 450 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 CHEK2O96017 543 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 BPGMP07738 259 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 FGF4P08620 206 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 GLI4P10075 376 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 NEFHP12036 1026 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 BCKDHAP12694 445 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 CYP4B1P13584 511 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 NAGAP17050 411 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 AGAP20933 346 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 ACVR2AP27037 513 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 PTPN6P29350 595 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 ETV4P43268 484 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 GSTM5P46439 218 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 RFX3P48380 749 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 SERPINB4P48594 390 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 CDK9P50750 372 aaKnown RBP5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 DCAF7P61962 342 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 RPP38P78345 283 aaKnown RBP5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 PSG6Q00889 435 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 HSPB3Q12988 150 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 MPP2Q14168 576 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 XKR7Q5GH72 579 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 CEP85LQ5SZL2 805 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 DCST1Q5T197 706 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 C1orf185Q5T7R7 199 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 WLSQ5T9L3 541 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 TIGD3Q6B0B8 471 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 TMEM211Q6ICI0 200 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 OR5M10Q6IEU7 315 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 B3GNT6Q6ZMB0 384 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 IKBIPQ70UQ0 350 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 LARP4Q71RC2 724 aaKnown RBP eCLIP5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 NUP54Q7Z3B4 507 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 GALNT10Q86SR1 603 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 EXOC3L1Q86VI1 746 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 NUDCD3Q8IVD9 361 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 MCEMP1Q8IX19 187 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 ULK2Q8IYT8 1036 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 SAMD14Q8IZD0 417 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 EID3Q8N140 333 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 LIX1Q8N485 282 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 WDSUB1Q8N9V3 476 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 FAM83FQ8NEG4 500 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 OR10Q1Q8NGQ4 319 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 OR6Y1Q8NGX8 325 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 PPP1R14CQ8TAE6 165 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 NEIL3Q8TAT5 605 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 FAM76AQ8TAV0 307 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 CA5BP1Q8WTZ4 195 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 RND1Q92730 232 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 SARAFQ96BY9 339 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 PPCDCQ96CD2 204 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 NTNG2Q96CW9 530 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 OTUB1Q96FW1 271 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 TMEM41AQ96HV5 264 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 FCRL1Q96LA6 429 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 PPP1R36Q96LQ0 422 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 COL21A1Q96P44 957 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 SECISBP2Q96T21 854 aaKnown RBP5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 CCT7Q99832 543 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 UBQLN3Q9H347 655 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 REEP4Q9H6H4 257 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 EML4Q9HC35 981 aaKnown RBP5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 ACKR4Q9NPB9 350 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 EQTNQ9NQ60 294 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 TPSG1Q9NRR2 321 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 DDX18Q9NVP1 670 aaKnown RBP5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 TAS2R7Q9NYW3 318 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 COQ3Q9NZJ6 369 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 SH3BP4Q9P0V3 963 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 B4GALT7Q9UBV7 327 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 RAB21Q9UL25 225 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 C19orf53Q9UNZ5 99 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 CAMK2AQ9UQM7 478 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 OR10H1Q9Y4A9 318 aa5.26□□□□□ -1.57
HMGB1P20-201ENST00000402555 ARHGAP21Q5T5U3 1957 aa5.25□□□□□ -1.57
HMGB1P20-201ENST00000402555 OTOGQ6ZRI0 2925 aa5.25□□□□□ -1.57
HMGB1P20-201ENST00000402555 ABCA4P78363 2273 aa5.25□□□□□ -1.57
HMGB1P20-201ENST00000402555 HCFC1P51610 2035 aa5.25□□□□□ -1.57
HMGB1P20-201ENST00000402555 A0A087WV62 115 aa5.25□□□□□ -1.57
HMGB1P20-201ENST00000402555 A0A0G2JNJ9 132 aa5.25□□□□□ -1.57
HMGB1P20-201ENST00000402555 OR6C70A6NIJ9 312 aa5.25□□□□□ -1.57
HMGB1P20-201ENST00000402555 PLOD2O00469 737 aa5.25□□□□□ -1.57
HMGB1P20-201ENST00000402555 COQ9O75208 318 aa5.25□□□□□ -1.57
HMGB1P20-201ENST00000402555 TOXO94900 526 aa5.25□□□□□ -1.57
HMGB1P20-201ENST00000402555 PSMG1O95456 288 aa5.25□□□□□ -1.57
HMGB1P20-201ENST00000402555 HSPA4LO95757 839 aa5.25□□□□□ -1.57
HMGB1P20-201ENST00000402555 IGKV1D-16P01601 117 aa5.25□□□□□ -1.57
HMGB1P20-201ENST00000402555 HPNP05981 417 aa5.25□□□□□ -1.57
HMGB1P20-201ENST00000402555 COX6B1P14854 86 aa5.25□□□□□ -1.57
HMGB1P20-201ENST00000402555 BMP7P18075 431 aa5.25□□□□□ -1.57
HMGB1P20-201ENST00000402555 BGNP21810 368 aa5.25□□□□□ -1.57
HMGB1P20-201ENST00000402555 IL12BP29460 328 aa5.25□□□□□ -1.57
HMGB1P20-201ENST00000402555 CHRNB4P30926 498 aa5.25□□□□□ -1.57
HMGB1P20-201ENST00000402555 GABRA3P34903 492 aa5.25□□□□□ -1.57
HMGB1P20-201ENST00000402555 KRT20P35900 424 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms