RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 I3L521 148 aa17.18■□□□□ 0.34
COL18A1-204ENST00000400337 RAB12Q6IQ22 244 aa17.18■□□□□ 0.34
COL18A1-204ENST00000400337 MEX3DQ86XN8 651 aaKnown RBP17.18■□□□□ 0.34
COL18A1-204ENST00000400337 MFSD6LQ8IWD5 586 aa17.18■□□□□ 0.34
COL18A1-204ENST00000400337 ZBTB8BQ8NAP8 495 aaPredicted RBP17.18■□□□□ 0.34
COL18A1-204ENST00000400337 TRIM43Q96BQ3 446 aaPredicted RBP17.18■□□□□ 0.34
COL18A1-204ENST00000400337 ZNF700Q9H0M5 742 aa17.18■□□□□ 0.34
COL18A1-204ENST00000400337 TBCCD1Q9NVR7 557 aa17.18■□□□□ 0.34
COL18A1-204ENST00000400337 NUFIP1Q9UHK0 495 aaKnown RBP17.18■□□□□ 0.34
COL18A1-204ENST00000400337 FAM171A2A8MVW0 826 aa17.18■□□□□ 0.34
COL18A1-204ENST00000400337 NDUFB2O95178 105 aa17.18■□□□□ 0.34
COL18A1-204ENST00000400337 WDR53Q7Z5U6 358 aaPredicted RBP17.18■□□□□ 0.34
COL18A1-204ENST00000400337 RLN3Q8WXF3 142 aa17.18■□□□□ 0.34
COL18A1-204ENST00000400337 BORCS8Q96FH0 119 aa17.18■□□□□ 0.34
COL18A1-204ENST00000400337 GORASP2Q9H8Y8 452 aa17.18■□□□□ 0.34
COL18A1-204ENST00000400337 MYO18AQ92614 2054 aaKnown RBP17.17■□□□□ 0.34
COL18A1-204ENST00000400337 M0R129 80 aa17.17■□□□□ 0.34
COL18A1-204ENST00000400337 KIAA0355O15063 1070 aa17.17■□□□□ 0.34
COL18A1-204ENST00000400337 PVRP15151 417 aa17.17■□□□□ 0.34
COL18A1-204ENST00000400337 HOXC5Q00444 222 aa17.17■□□□□ 0.34
COL18A1-204ENST00000400337 CHRFAM7AQ494W8 412 aa17.17■□□□□ 0.34
COL18A1-204ENST00000400337 CHRDL2Q6WN34 429 aa17.17■□□□□ 0.34
COL18A1-204ENST00000400337 RFLNAQ6ZTI6 216 aa17.17■□□□□ 0.34
COL18A1-204ENST00000400337 PAPD5Q8NDF8 572 aaKnown RBP17.17■□□□□ 0.34
COL18A1-204ENST00000400337 NT5C3BQ969T7 300 aa17.17■□□□□ 0.34
COL18A1-204ENST00000400337 SLC6A7Q99884 636 aa17.17■□□□□ 0.34
COL18A1-204ENST00000400337 NAALAD2Q9Y3Q0 740 aa17.17■□□□□ 0.34
COL18A1-204ENST00000400337 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.17■□□□□ 0.34
COL18A1-204ENST00000400337 SLC9B1P1A6NJY1 282 aa17.17■□□□□ 0.34
COL18A1-204ENST00000400337 PRKYO43930 277 aa17.17■□□□□ 0.34
COL18A1-204ENST00000400337 P04436 131 aa17.17■□□□□ 0.34
COL18A1-204ENST00000400337 DLX2Q07687 328 aaPredicted RBP17.17■□□□□ 0.34
COL18A1-204ENST00000400337 ALG10Q5BKT4 473 aa17.17■□□□□ 0.34
COL18A1-204ENST00000400337 SPAG16Q8N0X2 631 aa17.17■□□□□ 0.34
COL18A1-204ENST00000400337 TRUB1Q8WWH5 349 aaKnown RBP17.17■□□□□ 0.34
COL18A1-204ENST00000400337 GTF2H4Q92759 462 aa17.17■□□□□ 0.34
COL18A1-204ENST00000400337 METTL2AQ96IZ6 378 aaKnown RBP17.17■□□□□ 0.34
COL18A1-204ENST00000400337 SLC5A7Q9GZV3 580 aa17.17■□□□□ 0.34
COL18A1-204ENST00000400337 HS3ST2Q9Y278 367 aa17.17■□□□□ 0.34
COL18A1-204ENST00000400337 CSNK1G3Q9Y6M4 447 aa17.17■□□□□ 0.34
COL18A1-204ENST00000400337 KIR2DS5A0A0G2JLQ3 304 aa17.17■□□□□ 0.34
COL18A1-204ENST00000400337 A0A0G2JNG1 304 aa17.17■□□□□ 0.34
COL18A1-204ENST00000400337 KIR2DS3K7RE56 304 aa17.17■□□□□ 0.34
COL18A1-204ENST00000400337 GABBR2O75899 941 aa17.17■□□□□ 0.34
COL18A1-204ENST00000400337 KIR2DS5Q14953 304 aa17.17■□□□□ 0.34
COL18A1-204ENST00000400337 LRRC37A5PQ49AS3 106 aa17.17■□□□□ 0.34
COL18A1-204ENST00000400337 CMPK2Q5EBM0 449 aa17.17■□□□□ 0.34
COL18A1-204ENST00000400337 GAREM2Q75VX8 874 aa17.17■□□□□ 0.34
COL18A1-204ENST00000400337 CDS1Q92903 461 aa17.17■□□□□ 0.34
COL18A1-204ENST00000400337 FKBP10Q96AY3 582 aa17.17■□□□□ 0.34
COL18A1-204ENST00000400337 TP63Q9H3D4 680 aaPredicted RBP17.17■□□□□ 0.34
COL18A1-204ENST00000400337 C12orf71A8MTZ7 269 aa17.17■□□□□ 0.34
COL18A1-204ENST00000400337 RBMXP38159 391 aaKnown RBP17.17■□□□□ 0.34
COL18A1-204ENST00000400337 LPAL2Q16609 132 aa17.17■□□□□ 0.34
COL18A1-204ENST00000400337 SLC18B1Q6NT16 456 aa17.17■□□□□ 0.34
COL18A1-204ENST00000400337 TMEM173Q86WV6 379 aaPredicted RBP17.17■□□□□ 0.34
COL18A1-204ENST00000400337 LKAAEAR1Q8TD35 194 aa17.17■□□□□ 0.34
COL18A1-204ENST00000400337 TANKQ92844 425 aa17.17■□□□□ 0.34
COL18A1-204ENST00000400337 PITHD1Q9GZP4 211 aaPredicted RBP17.17■□□□□ 0.34
COL18A1-204ENST00000400337 ZNF350Q9GZX5 532 aa17.17■□□□□ 0.34
COL18A1-204ENST00000400337 TREM1Q9NP99 234 aa17.17■□□□□ 0.34
COL18A1-204ENST00000400337 MAOBP27338 520 aa17.16■□□□□ 0.34
COL18A1-204ENST00000400337 ACY1Q03154 408 aa17.16■□□□□ 0.34
COL18A1-204ENST00000400337 SNTB2Q13425 540 aaKnown RBP17.16■□□□□ 0.34
COL18A1-204ENST00000400337 KEAP1Q14145 624 aa17.16■□□□□ 0.34
COL18A1-204ENST00000400337 BTBD16Q32M84 506 aa17.16■□□□□ 0.34
COL18A1-204ENST00000400337 URM1Q9BTM9 101 aaKnown RBP17.16■□□□□ 0.34
COL18A1-204ENST00000400337 USP36Q9P275 1121 aaKnown RBP17.16■□□□□ 0.34
COL18A1-204ENST00000400337 CA5BQ9Y2D0 317 aa17.16■□□□□ 0.34
COL18A1-204ENST00000400337 TCRBV3S1A0A5B6 114 aa17.16■□□□□ 0.34
COL18A1-204ENST00000400337 CIB4A0PJX0 185 aa17.16■□□□□ 0.34
COL18A1-204ENST00000400337 F11P03951 625 aa17.16■□□□□ 0.34
COL18A1-204ENST00000400337 UCHL1P09936 223 aa17.16■□□□□ 0.34
COL18A1-204ENST00000400337 HIST1H1TP22492 207 aaPredicted RBP17.16■□□□□ 0.34
COL18A1-204ENST00000400337 GGT2P36268 569 aa17.16■□□□□ 0.34
COL18A1-204ENST00000400337 ZNF81P51508 661 aa17.16■□□□□ 0.34
COL18A1-204ENST00000400337 HSD11B2P80365 405 aa17.16■□□□□ 0.34
COL18A1-204ENST00000400337 MRPL49Q13405 166 aaKnown RBP17.16■□□□□ 0.34
COL18A1-204ENST00000400337 C6orf183Q5T699 404 aa17.16■□□□□ 0.34
COL18A1-204ENST00000400337 CCBE1Q6UXH8 406 aaPredicted RBP17.16■□□□□ 0.34
COL18A1-204ENST00000400337 CASC3O15234 703 aaKnown RBP17.16■□□□□ 0.34
COL18A1-204ENST00000400337 RAB3BP20337 219 aa17.16■□□□□ 0.34
COL18A1-204ENST00000400337 MAGEA3P43357 314 aa17.16■□□□□ 0.34
COL18A1-204ENST00000400337 PYHIN1Q6K0P9 492 aa17.16■□□□□ 0.34
COL18A1-204ENST00000400337 MCATQ8IVS2 390 aaKnown RBP17.16■□□□□ 0.34
COL18A1-204ENST00000400337 ZNF100Q8IYN0 542 aa17.16■□□□□ 0.34
COL18A1-204ENST00000400337 METTL25Q8N6Q8 603 aa17.16■□□□□ 0.34
COL18A1-204ENST00000400337 GALNT11Q8NCW6 608 aa17.16■□□□□ 0.34
COL18A1-204ENST00000400337 TMEM239Q8WW34 195 aa17.16■□□□□ 0.34
COL18A1-204ENST00000400337 ASB15Q8WXK1 588 aa17.16■□□□□ 0.34
COL18A1-204ENST00000400337 KHSRPQ92945 711 aaKnown RBP eCLIP17.16■□□□□ 0.343e-10■■■■■ 30.4
COL18A1-204ENST00000400337 RTP3Q9BQQ7 232 aa17.16■□□□□ 0.34
COL18A1-204ENST00000400337 ERVK-19Q9WJR5 959 aa17.16■□□□□ 0.34
COL18A1-204ENST00000400337 FOSL2P15408 326 aa17.16■□□□□ 0.34
COL18A1-204ENST00000400337 LHCGRP22888 699 aa17.16■□□□□ 0.34
COL18A1-204ENST00000400337 MAGEA12P43365 314 aa17.16■□□□□ 0.34
COL18A1-204ENST00000400337 XCR1P46094 333 aa17.16■□□□□ 0.34
COL18A1-204ENST00000400337 LSAMPQ13449 338 aa17.16■□□□□ 0.34
COL18A1-204ENST00000400337 SSX6Q7RTT6 188 aa17.16■□□□□ 0.34
COL18A1-204ENST00000400337 CLEC14AQ86T13 490 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms