RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 NRG3P56975 720 aa11.4□□□□□ -0.58
HLA-DQB1-203ENST00000399082 NFYCQ13952 458 aa11.4□□□□□ -0.58
HLA-DQB1-203ENST00000399082 ZNHIT3Q15649 155 aaPredicted RBP11.4□□□□□ -0.58
HLA-DQB1-203ENST00000399082 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.4□□□□□ -0.58
HLA-DQB1-203ENST00000399082 TRMT5Q32P41 509 aaKnown RBP11.4□□□□□ -0.58
HLA-DQB1-203ENST00000399082 SOWAHCQ53LP3 525 aaPredicted RBP11.4□□□□□ -0.58
HLA-DQB1-203ENST00000399082 BICRALQ6AI39 1079 aa11.4□□□□□ -0.58
HLA-DQB1-203ENST00000399082 HEPHL1Q6MZM0 1159 aa11.4□□□□□ -0.58
HLA-DQB1-203ENST00000399082 C8orf82Q6P1X6 216 aaPredicted RBP11.4□□□□□ -0.58
HLA-DQB1-203ENST00000399082 FIGNL1Q6PIW4 674 aa11.4□□□□□ -0.58
HLA-DQB1-203ENST00000399082 RTL4Q6ZR62 310 aa11.4□□□□□ -0.58
HLA-DQB1-203ENST00000399082 PTRH1Q86Y79 214 aaKnown RBP11.4□□□□□ -0.58
HLA-DQB1-203ENST00000399082 GOLM1Q8NBJ4 401 aa11.4□□□□□ -0.58
HLA-DQB1-203ENST00000399082 LSM14AQ8ND56 463 aaKnown RBP11.4□□□□□ -0.58
HLA-DQB1-203ENST00000399082 CHDHQ8NE62 594 aaPredicted RBP11.4□□□□□ -0.58
HLA-DQB1-203ENST00000399082 OR52N2Q8NGI0 321 aa11.4□□□□□ -0.58
HLA-DQB1-203ENST00000399082 OR5M3Q8NGP4 307 aa11.4□□□□□ -0.58
HLA-DQB1-203ENST00000399082 SPPL2AQ8TCT8 520 aa11.4□□□□□ -0.58
HLA-DQB1-203ENST00000399082 ADAMTS15Q8TE58 950 aa11.4□□□□□ -0.58
HLA-DQB1-203ENST00000399082 DIO2Q92813 273 aa11.4□□□□□ -0.58
HLA-DQB1-203ENST00000399082 ANKRD27Q96NW4 1050 aa11.4□□□□□ -0.58
HLA-DQB1-203ENST00000399082 COL21A1Q96P44 957 aa11.4□□□□□ -0.58
HLA-DQB1-203ENST00000399082 LRRC37BQ96QE4 947 aa11.4□□□□□ -0.58
HLA-DQB1-203ENST00000399082 ADOQ96SZ5 270 aa11.4□□□□□ -0.58
HLA-DQB1-203ENST00000399082 RTN4RQ9BZR6 473 aa11.4□□□□□ -0.58
HLA-DQB1-203ENST00000399082 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.4□□□□□ -0.58
HLA-DQB1-203ENST00000399082 RYDENQ9NUL5 291 aaKnown RBP11.4□□□□□ -0.58
HLA-DQB1-203ENST00000399082 B3GNT3Q9Y2A9 372 aa11.4□□□□□ -0.58
HLA-DQB1-203ENST00000399082 OR10H1Q9Y4A9 318 aa11.4□□□□□ -0.58
HLA-DQB1-203ENST00000399082 PCDHGA10Q9Y5H3 936 aa11.4□□□□□ -0.58
HLA-DQB1-203ENST00000399082 CFAP46Q8IYW2 2715 aa11.39□□□□□ -0.59
HLA-DQB1-203ENST00000399082 TRAV17A0A0B4J275 112 aa11.39□□□□□ -0.59
HLA-DQB1-203ENST00000399082 CENPVL1A0A0U1RR11 272 aa11.39□□□□□ -0.59
HLA-DQB1-203ENST00000399082 C17orf51A8MQB3 221 aa11.39□□□□□ -0.59
HLA-DQB1-203ENST00000399082 B4DXG7 233 aa11.39□□□□□ -0.59
HLA-DQB1-203ENST00000399082 G3V3Y1 287 aa11.39□□□□□ -0.59
HLA-DQB1-203ENST00000399082 NME2P1O60361 137 aa11.39□□□□□ -0.59
HLA-DQB1-203ENST00000399082 TNFRSF21O75509 655 aa11.39□□□□□ -0.59
HLA-DQB1-203ENST00000399082 C1QL1O75973 258 aa11.39□□□□□ -0.59
HLA-DQB1-203ENST00000399082 KRT75O95678 551 aa11.39□□□□□ -0.59
HLA-DQB1-203ENST00000399082 PRB1P04280 392 aa11.39□□□□□ -0.59
HLA-DQB1-203ENST00000399082 KRT16P08779 473 aa11.39□□□□□ -0.59
HLA-DQB1-203ENST00000399082 BMP2P12643 396 aa11.39□□□□□ -0.59
HLA-DQB1-203ENST00000399082 NME2P22392 152 aa11.39□□□□□ -0.59
HLA-DQB1-203ENST00000399082 KHKP50053 298 aa11.39□□□□□ -0.59
HLA-DQB1-203ENST00000399082 PNLIPRP2P54317 469 aa11.39□□□□□ -0.59
HLA-DQB1-203ENST00000399082 MTPNP58546 118 aa11.39□□□□□ -0.59
HLA-DQB1-203ENST00000399082 PSPHP78330 225 aa11.39□□□□□ -0.59
HLA-DQB1-203ENST00000399082 POU6F2P78424 691 aaPredicted RBP11.39□□□□□ -0.59
HLA-DQB1-203ENST00000399082 ZNF169Q14929 603 aaPredicted RBP11.39□□□□□ -0.59
HLA-DQB1-203ENST00000399082 RGNQ15493 299 aa11.39□□□□□ -0.59
HLA-DQB1-203ENST00000399082 ZNF766Q5HY98 468 aa11.39□□□□□ -0.59
HLA-DQB1-203ENST00000399082 DCST2Q5T1A1 773 aa11.39□□□□□ -0.59
HLA-DQB1-203ENST00000399082 PRAMEF20Q5VT98 475 aa11.39□□□□□ -0.59
HLA-DQB1-203ENST00000399082 SLC25A25Q6KCM7 469 aa11.39□□□□□ -0.59
HLA-DQB1-203ENST00000399082 ANGPTL8Q6UXH0 198 aa11.39□□□□□ -0.59
HLA-DQB1-203ENST00000399082 GALNTL5Q7Z4T8 443 aa11.39□□□□□ -0.59
HLA-DQB1-203ENST00000399082 DND1Q8IYX4 353 aaKnown RBP11.39□□□□□ -0.59
HLA-DQB1-203ENST00000399082 COX18Q8N8Q8 333 aa11.39□□□□□ -0.59
HLA-DQB1-203ENST00000399082 PSD4Q8NDX1 1056 aa11.39□□□□□ -0.59
HLA-DQB1-203ENST00000399082 FAM13CQ8NE31 585 aa11.39□□□□□ -0.59
HLA-DQB1-203ENST00000399082 DNAJB8Q8NHS0 232 aa11.39□□□□□ -0.59
HLA-DQB1-203ENST00000399082 FBXO27Q8NI29 283 aa11.39□□□□□ -0.59
HLA-DQB1-203ENST00000399082 PNPLA2Q96AD5 504 aa11.39□□□□□ -0.59
HLA-DQB1-203ENST00000399082 LRRC58Q96CX6 371 aa11.39□□□□□ -0.59
HLA-DQB1-203ENST00000399082 SGCZQ96LD1 299 aa11.39□□□□□ -0.59
HLA-DQB1-203ENST00000399082 SMG1Q96Q15 3661 aaKnown RBP11.39□□□□□ -0.59
HLA-DQB1-203ENST00000399082 SDF2Q99470 211 aa11.39□□□□□ -0.59
HLA-DQB1-203ENST00000399082 GPATCH1Q9BRR8 931 aaKnown RBP11.39□□□□□ -0.59
HLA-DQB1-203ENST00000399082 BTBD2Q9BX70 525 aa11.39□□□□□ -0.59
HLA-DQB1-203ENST00000399082 KLHL1Q9NR64 748 aa11.39□□□□□ -0.59
HLA-DQB1-203ENST00000399082 PCDHGB6Q9Y5F9 930 aa11.39□□□□□ -0.59
HLA-DQB1-203ENST00000399082 SPTA1P02549 2419 aa11.38□□□□□ -0.59
HLA-DQB1-203ENST00000399082 NPIPA5A0A0B4J1W7 369 aa11.38□□□□□ -0.59
HLA-DQB1-203ENST00000399082 NPIPA7E9PJI5 369 aa11.38□□□□□ -0.59
HLA-DQB1-203ENST00000399082 NPIPB9F8W1W9 429 aa11.38□□□□□ -0.59
HLA-DQB1-203ENST00000399082 FCMRO60667 390 aa11.38□□□□□ -0.59
HLA-DQB1-203ENST00000399082 ICOSLGO75144 302 aa11.38□□□□□ -0.59
HLA-DQB1-203ENST00000399082 UTS2O95399 124 aa11.38□□□□□ -0.59
HLA-DQB1-203ENST00000399082 CHRM4P08173 479 aa11.38□□□□□ -0.59
HLA-DQB1-203ENST00000399082 NPIPA8P0DM63 369 aa11.38□□□□□ -0.59
HLA-DQB1-203ENST00000399082 GPX2P18283 190 aa11.38□□□□□ -0.59
HLA-DQB1-203ENST00000399082 MAGEA8P43361 318 aa11.38□□□□□ -0.59
HLA-DQB1-203ENST00000399082 CPA2P48052 419 aa11.38□□□□□ -0.59
HLA-DQB1-203ENST00000399082 RFX3P48380 749 aa11.38□□□□□ -0.59
HLA-DQB1-203ENST00000399082 TMED10P49755 219 aaKnown RBP11.38□□□□□ -0.59
HLA-DQB1-203ENST00000399082 GZMMP51124 257 aa11.38□□□□□ -0.59
HLA-DQB1-203ENST00000399082 GAS1P54826 345 aa11.38□□□□□ -0.59
HLA-DQB1-203ENST00000399082 GPR85P60893 370 aa11.38□□□□□ -0.59
HLA-DQB1-203ENST00000399082 PMP22Q01453 160 aa11.38□□□□□ -0.59
HLA-DQB1-203ENST00000399082 KLRB1Q12918 225 aa11.38□□□□□ -0.59
HLA-DQB1-203ENST00000399082 NFATC3Q12968 1075 aa11.38□□□□□ -0.59
HLA-DQB1-203ENST00000399082 STX5Q13190 355 aa11.38□□□□□ -0.59
HLA-DQB1-203ENST00000399082 ADRM1Q16186 407 aa11.38□□□□□ -0.59
HLA-DQB1-203ENST00000399082 SYPL1Q16563 259 aa11.38□□□□□ -0.59
HLA-DQB1-203ENST00000399082 DECR1Q16698 335 aa11.38□□□□□ -0.59
HLA-DQB1-203ENST00000399082 ARHGAP11BQ3KRB8 267 aa11.38□□□□□ -0.59
HLA-DQB1-203ENST00000399082 PRR30Q53SZ7 412 aaPredicted RBP11.38□□□□□ -0.59
HLA-DQB1-203ENST00000399082 RABL3Q5HYI8 236 aa11.38□□□□□ -0.59
HLA-DQB1-203ENST00000399082 NANOGP8Q6NSW7 305 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms