RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 SAMD13Q5VXD3 122 aa2.58□□□□□ -2
CHD9-202ENST00000398510 LINGO2Q7L985 606 aa2.58□□□□□ -2
CHD9-202ENST00000398510 BTLAQ7Z6A9 289 aa2.58□□□□□ -2
CHD9-202ENST00000398510 GRAMD2AQ8IUY3 354 aa2.58□□□□□ -2
CHD9-202ENST00000398510 PRR22Q8IZ63 422 aa2.58□□□□□ -2
CHD9-202ENST00000398510 LGI4Q8N135 537 aa2.58□□□□□ -2
CHD9-202ENST00000398510 MFSD4AQ8N468 514 aa2.58□□□□□ -2
CHD9-202ENST00000398510 OR5K2Q8NHB8 316 aa2.58□□□□□ -2
CHD9-202ENST00000398510 NETO1Q8TDF5 533 aa2.58□□□□□ -2
CHD9-202ENST00000398510 HAS2Q92819 552 aa2.58□□□□□ -2
CHD9-202ENST00000398510 TATDN2Q93075 761 aa2.58□□□□□ -2
CHD9-202ENST00000398510 TAAR8Q969N4 342 aa2.58□□□□□ -2
CHD9-202ENST00000398510 OR5B12Q96R08 314 aa2.58□□□□□ -2
CHD9-202ENST00000398510 ERVK-5Q9HDB9 667 aa2.58□□□□□ -2
CHD9-202ENST00000398510 ACP6Q9NPH0 428 aa2.58□□□□□ -2
CHD9-202ENST00000398510 BRD7Q9NPI1 651 aa2.58□□□□□ -2
CHD9-202ENST00000398510 ERVK-18Q9QC07 812 aa2.58□□□□□ -2
CHD9-202ENST00000398510 SLC23A2Q9UGH3 650 aa2.58□□□□□ -2
CHD9-202ENST00000398510 EVLQ9UI08 416 aaPredicted RBP2.58□□□□□ -2
CHD9-202ENST00000398510 COPS3Q9UNS2 423 aa2.58□□□□□ -2
CHD9-202ENST00000398510 FAM186AA6NE01 2351 aa2.58□□□□□ -2
CHD9-202ENST00000398510 C2orf78A6NCI8 922 aa2.58□□□□□ -2
CHD9-202ENST00000398510 SLC31A1O15431 190 aa2.58□□□□□ -2
CHD9-202ENST00000398510 GMFGO60234 142 aa2.58□□□□□ -2
CHD9-202ENST00000398510 PIP5K1CO60331 668 aa2.58□□□□□ -2
CHD9-202ENST00000398510 POU2F2P09086 479 aa2.58□□□□□ -2
CHD9-202ENST00000398510 TFPTP0C1Z6 253 aa2.58□□□□□ -2
CHD9-202ENST00000398510 UBBP0CG47 229 aa2.58□□□□□ -2
CHD9-202ENST00000398510 TUBG1P23258 451 aa2.58□□□□□ -2
CHD9-202ENST00000398510 ITPKAP23677 461 aa2.58□□□□□ -2
CHD9-202ENST00000398510 GGT2P36268 569 aa2.58□□□□□ -2
CHD9-202ENST00000398510 JAM2P57087 298 aa2.58□□□□□ -2
CHD9-202ENST00000398510 CDK3Q00526 305 aa2.58□□□□□ -2
CHD9-202ENST00000398510 ARHGAP1Q07960 439 aa2.58□□□□□ -2
CHD9-202ENST00000398510 HMGN3Q15651 99 aa2.58□□□□□ -2
CHD9-202ENST00000398510 AGAP6Q5VW22 663 aa2.58□□□□□ -2
CHD9-202ENST00000398510 SLC39A5Q6ZMH5 540 aa2.58□□□□□ -2
CHD9-202ENST00000398510 CACUL1Q86Y37 369 aa2.58□□□□□ -2
CHD9-202ENST00000398510 JAGN1Q8N5M9 183 aa2.58□□□□□ -2
CHD9-202ENST00000398510 SLC15A4Q8N697 577 aa2.58□□□□□ -2
CHD9-202ENST00000398510 KDF1Q8NAX2 398 aaPredicted RBP2.58□□□□□ -2
CHD9-202ENST00000398510 MDGA1Q8NFP4 955 aa2.58□□□□□ -2
CHD9-202ENST00000398510 OR14L1PQ8NHC6 308 aa2.58□□□□□ -2
CHD9-202ENST00000398510 ZNF296Q8WUU4 475 aaPredicted RBP2.58□□□□□ -2
CHD9-202ENST00000398510 TRUB1Q8WWH5 349 aaKnown RBP2.58□□□□□ -2
CHD9-202ENST00000398510 DPF1Q92782 380 aa2.58□□□□□ -2
CHD9-202ENST00000398510 ELSPBP1Q96BH3 223 aa2.58□□□□□ -2
CHD9-202ENST00000398510 SLC41A2Q96JW4 573 aa2.58□□□□□ -2
CHD9-202ENST00000398510 RIMS4Q9H426 269 aaPredicted RBP2.58□□□□□ -2
CHD9-202ENST00000398510 PLK3Q9H4B4 646 aa2.58□□□□□ -2
CHD9-202ENST00000398510 CCSER2Q9H7U1 834 aa2.58□□□□□ -2
CHD9-202ENST00000398510 APMAPQ9HDC9 416 aa2.58□□□□□ -2
CHD9-202ENST00000398510 TUBG2Q9NRH3 451 aa2.58□□□□□ -2
CHD9-202ENST00000398510 RNF186Q9NXI6 227 aa2.58□□□□□ -2
CHD9-202ENST00000398510 PDP1Q9P0J1 537 aaPredicted RBP2.58□□□□□ -2
CHD9-202ENST00000398510 LGALS13Q9UHV8 139 aa2.58□□□□□ -2
CHD9-202ENST00000398510 FAM96BQ9Y3D0 163 aa2.58□□□□□ -2
CHD9-202ENST00000398510 ETV7Q9Y603 341 aa2.58□□□□□ -2
CHD9-202ENST00000398510 KIR2DS1A0A191URI9 304 aa2.58□□□□□ -2
CHD9-202ENST00000398510 NPIPB15A6NHN6 443 aaPredicted RBP2.58□□□□□ -2
CHD9-202ENST00000398510 MEN1O00255 615 aa2.58□□□□□ -2
CHD9-202ENST00000398510 GNB5O14775 395 aa2.58□□□□□ -2
CHD9-202ENST00000398510 AQP9O43315 295 aa2.58□□□□□ -2
CHD9-202ENST00000398510 AHCYL1O43865 530 aa2.58□□□□□ -2
CHD9-202ENST00000398510 STBD1O95210 358 aa2.58□□□□□ -2
CHD9-202ENST00000398510 BGNP21810 368 aa2.58□□□□□ -2
CHD9-202ENST00000398510 EVI2BP34910 448 aa2.58□□□□□ -2
CHD9-202ENST00000398510 MDH2P40926 338 aaKnown RBP2.58□□□□□ -2
CHD9-202ENST00000398510 KIR2DS4P43632 304 aa2.58□□□□□ -2
CHD9-202ENST00000398510 RGS6P49758 472 aa2.58□□□□□ -2
CHD9-202ENST00000398510 RABGGTBP53611 331 aa2.58□□□□□ -2
CHD9-202ENST00000398510 GRB2P62993 217 aaKnown RBP2.58□□□□□ -2
CHD9-202ENST00000398510 KIR2DS1Q14954 304 aa2.58□□□□□ -2
CHD9-202ENST00000398510 FSTL4Q6MZW2 842 aa2.58□□□□□ -2
CHD9-202ENST00000398510 ARSKQ6UWY0 536 aa2.58□□□□□ -2
CHD9-202ENST00000398510 ZNF598Q86UK7 904 aaKnown RBP2.58□□□□□ -2
CHD9-202ENST00000398510 PTOV1Q86YD1 416 aa2.58□□□□□ -2
CHD9-202ENST00000398510 FAM3CQ92520 227 aa2.58□□□□□ -2
CHD9-202ENST00000398510 GRAMD2BQ96HH9 432 aa2.58□□□□□ -2
CHD9-202ENST00000398510 DIRAS2Q96HU8 199 aa2.58□□□□□ -2
CHD9-202ENST00000398510 CELF6Q96J87 481 aaKnown RBP2.58□□□□□ -2
CHD9-202ENST00000398510 C3orf30Q96M34 536 aa2.58□□□□□ -2
CHD9-202ENST00000398510 RIOK2Q9BVS4 552 aaKnown RBP2.58□□□□□ -2
CHD9-202ENST00000398510 TMEM168Q9H0V1 697 aa2.58□□□□□ -2
CHD9-202ENST00000398510 NMUR1Q9HB89 426 aa2.58□□□□□ -2
CHD9-202ENST00000398510 RDH14Q9HBH5 336 aa2.58□□□□□ -2
CHD9-202ENST00000398510 UBQLN4Q9NRR5 601 aa2.58□□□□□ -2
CHD9-202ENST00000398510 TRNAU1APQ9NX07 287 aaKnown RBP2.58□□□□□ -2
CHD9-202ENST00000398510 FAM198AQ9UFP1 575 aa2.58□□□□□ -2
CHD9-202ENST00000398510 FZD10Q9ULW2 581 aa2.58□□□□□ -2
CHD9-202ENST00000398510 WDR45Q9Y484 360 aa2.58□□□□□ -2
CHD9-202ENST00000398510 ZGRF1Q86YA3 2104 aa2.58□□□□□ -2
CHD9-202ENST00000398510 PHF3Q92576 2039 aaKnown RBP2.58□□□□□ -2
CHD9-202ENST00000398510 IGLON5A6NGN9 336 aa2.58□□□□□ -2
CHD9-202ENST00000398510 M0R233 179 aa2.58□□□□□ -2
CHD9-202ENST00000398510 TERTO14746 1132 aaKnown RBP2.58□□□□□ -2
CHD9-202ENST00000398510 ELAVL4P26378 380 aaKnown RBP2.58□□□□□ -2
CHD9-202ENST00000398510 NME5P56597 212 aa2.58□□□□□ -2
CHD9-202ENST00000398510 RAB33AQ14088 237 aa2.58□□□□□ -2
CHD9-202ENST00000398510 DAG1Q14118 895 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms