RNA–Protein interactions for RNA: ENST00000397763.5

COL6A2-203, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,101 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-203ENST00000397763 MED28Q9H204 178 aa12.91□□□□□ -0.34
COL6A2-203ENST00000397763 NIPAL2Q9H841 368 aa12.91□□□□□ -0.34
COL6A2-203ENST00000397763 HMX1Q9NP08 348 aaPredicted RBP12.91□□□□□ -0.34
COL6A2-203ENST00000397763 KLHL1Q9NR64 748 aa12.91□□□□□ -0.34
COL6A2-203ENST00000397763 ZNF624Q9P2J8 865 aaPredicted RBP12.91□□□□□ -0.34
COL6A2-203ENST00000397763 EYSQ5T1H1 3165 aa12.9□□□□□ -0.34
COL6A2-203ENST00000397763 THSD7BQ9C0I4 1608 aa12.9□□□□□ -0.34
COL6A2-203ENST00000397763 LOC105369274A0A096LPK9 316 aa12.9□□□□□ -0.34
COL6A2-203ENST00000397763 ARRDC5A6NEK1 342 aa12.9□□□□□ -0.34
COL6A2-203ENST00000397763 EEF1E1O43324 174 aaKnown RBP12.9□□□□□ -0.34
COL6A2-203ENST00000397763 PI15O43692 258 aa12.9□□□□□ -0.34
COL6A2-203ENST00000397763 C6P13671 934 aa12.9□□□□□ -0.34
COL6A2-203ENST00000397763 ACP5P13686 325 aa12.9□□□□□ -0.34
COL6A2-203ENST00000397763 EVX1P49640 407 aa12.9□□□□□ -0.34
COL6A2-203ENST00000397763 CDK5Q00535 292 aa12.9□□□□□ -0.34
COL6A2-203ENST00000397763 KLHL12Q53G59 568 aa12.9□□□□□ -0.34
COL6A2-203ENST00000397763 KLHL22Q53GT1 634 aa12.9□□□□□ -0.34
COL6A2-203ENST00000397763 C18orf63Q68DL7 685 aa12.9□□□□□ -0.34
COL6A2-203ENST00000397763 SLC36A4Q6YBV0 504 aa12.9□□□□□ -0.34
COL6A2-203ENST00000397763 ZNF793Q6ZN11 406 aa12.9□□□□□ -0.34
COL6A2-203ENST00000397763 PLEKHM3Q6ZWE6 761 aa12.9□□□□□ -0.34
COL6A2-203ENST00000397763 UBE3DQ7Z6J8 389 aa12.9□□□□□ -0.34
COL6A2-203ENST00000397763 OR4N4Q8N0Y3 316 aa12.9□□□□□ -0.34
COL6A2-203ENST00000397763 AP3S1Q92572 193 aa12.9□□□□□ -0.34
COL6A2-203ENST00000397763 MS4A8Q9BY19 250 aa12.9□□□□□ -0.34
COL6A2-203ENST00000397763 AHSPQ9NZD4 102 aa12.9□□□□□ -0.34
COL6A2-203ENST00000397763 SNTNA6NMZ2 147 aa12.9□□□□□ -0.34
COL6A2-203ENST00000397763 C4orf51C9J302 202 aa12.9□□□□□ -0.34
COL6A2-203ENST00000397763 SPINT1O43278 529 aa12.9□□□□□ -0.34
COL6A2-203ENST00000397763 SRPRAP08240 638 aaKnown RBP12.9□□□□□ -0.34
COL6A2-203ENST00000397763 PCSK2P16519 638 aa12.9□□□□□ -0.34
COL6A2-203ENST00000397763 SHC1P29353 583 aa12.9□□□□□ -0.34
COL6A2-203ENST00000397763 PPP2R1BP30154 601 aa12.9□□□□□ -0.34
COL6A2-203ENST00000397763 TNK1Q13470 666 aa12.9□□□□□ -0.34
COL6A2-203ENST00000397763 CAMK1Q14012 370 aa12.9□□□□□ -0.34
COL6A2-203ENST00000397763 RPTNQ6XPR3 784 aa12.9□□□□□ -0.34
COL6A2-203ENST00000397763 IDO2Q6ZQW0 420 aa12.9□□□□□ -0.34
COL6A2-203ENST00000397763 DPPA4Q7L190 304 aa12.9□□□□□ -0.34
COL6A2-203ENST00000397763 CPOQ8IVL8 374 aa12.9□□□□□ -0.34
COL6A2-203ENST00000397763 NRMQ8IXM6 262 aa12.9□□□□□ -0.34
COL6A2-203ENST00000397763 FAM181AQ8N9Y4 354 aa12.9□□□□□ -0.34
COL6A2-203ENST00000397763 KREMEN2Q8NCW0 462 aa12.9□□□□□ -0.34
COL6A2-203ENST00000397763 DTD2Q96FN9 168 aa12.9□□□□□ -0.34
COL6A2-203ENST00000397763 ARHGAP9Q9BRR9 750 aa12.9□□□□□ -0.34
COL6A2-203ENST00000397763 FUZQ9BT04 418 aa12.9□□□□□ -0.34
COL6A2-203ENST00000397763 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.9□□□□□ -0.34
COL6A2-203ENST00000397763 NDOR1Q9UHB4 597 aa12.9□□□□□ -0.34
COL6A2-203ENST00000397763 A0A1W2PRQ8 180 aa12.89□□□□□ -0.35
COL6A2-203ENST00000397763 NARSO43776 548 aaKnown RBP12.89□□□□□ -0.35
COL6A2-203ENST00000397763 SLC22A5O76082 557 aa12.89□□□□□ -0.35
COL6A2-203ENST00000397763 ZNF81P51508 661 aa12.89□□□□□ -0.35
COL6A2-203ENST00000397763 PCBP4P57723 403 aaKnown RBP12.89□□□□□ -0.35
COL6A2-203ENST00000397763 DCDC1P59894 354 aa12.89□□□□□ -0.35
COL6A2-203ENST00000397763 RPL6Q02878 288 aaKnown RBP12.89□□□□□ -0.35
COL6A2-203ENST00000397763 PCDH1Q08174 1060 aa12.89□□□□□ -0.35
COL6A2-203ENST00000397763 LTB4RQ15722 352 aa12.89□□□□□ -0.35
COL6A2-203ENST00000397763 ZNF311Q5JNZ3 666 aa12.89□□□□□ -0.35
COL6A2-203ENST00000397763 C9orf62Q8N4C0 152 aa12.89□□□□□ -0.35
COL6A2-203ENST00000397763 SIRT6Q8N6T7 355 aa12.89□□□□□ -0.35
COL6A2-203ENST00000397763 SAMD12Q8N8I0 201 aa12.89□□□□□ -0.35
COL6A2-203ENST00000397763 TMEM255BQ8WV15 326 aa12.89□□□□□ -0.35
COL6A2-203ENST00000397763 NXPE3Q969Y0 559 aa12.89□□□□□ -0.35
COL6A2-203ENST00000397763 NUS1Q96E22 293 aa12.89□□□□□ -0.35
COL6A2-203ENST00000397763 AMDHD1Q96NU7 426 aa12.89□□□□□ -0.35
COL6A2-203ENST00000397763 TMEM43Q9BTV4 400 aa12.89□□□□□ -0.35
COL6A2-203ENST00000397763 PAK6Q9NQU5 681 aaPredicted RBP12.89□□□□□ -0.35
COL6A2-203ENST00000397763 AP1M2Q9Y6Q5 423 aa12.89□□□□□ -0.35
COL6A2-203ENST00000397763 NUPL2O15504 423 aaKnown RBP12.89□□□□□ -0.35
COL6A2-203ENST00000397763 NDUFS4O43181 175 aa12.89□□□□□ -0.35
COL6A2-203ENST00000397763 UBXN7O94888 489 aa12.89□□□□□ -0.35
COL6A2-203ENST00000397763 ACRP10323 421 aa12.89□□□□□ -0.35
COL6A2-203ENST00000397763 ZNF155Q12901 538 aaPredicted RBP12.89□□□□□ -0.35
COL6A2-203ENST00000397763 TPBGQ13641 420 aa12.89□□□□□ -0.35
COL6A2-203ENST00000397763 GPR176Q14439 515 aa12.89□□□□□ -0.35
COL6A2-203ENST00000397763 C3orf38Q5JPI3 329 aa12.89□□□□□ -0.35
COL6A2-203ENST00000397763 C9orf64Q5T6V5 341 aa12.89□□□□□ -0.35
COL6A2-203ENST00000397763 ZBTB37Q5TC79 503 aa12.89□□□□□ -0.35
COL6A2-203ENST00000397763 ARL9Q6T311 187 aa12.89□□□□□ -0.35
COL6A2-203ENST00000397763 COMMD7Q86VX2 200 aa12.89□□□□□ -0.35
COL6A2-203ENST00000397763 LRRC17Q8N6Y2 441 aa12.89□□□□□ -0.35
COL6A2-203ENST00000397763 GTPBP2Q9BX10 602 aaKnown RBP12.89□□□□□ -0.35
COL6A2-203ENST00000397763 AICDAQ9GZX7 198 aa12.89□□□□□ -0.35
COL6A2-203ENST00000397763 ENKD1Q9H0I2 346 aa12.89□□□□□ -0.35
COL6A2-203ENST00000397763 SLC28A3Q9HAS3 691 aa12.89□□□□□ -0.35
COL6A2-203ENST00000397763 NUDT15Q9NV35 164 aa12.89□□□□□ -0.35
COL6A2-203ENST00000397763 MRPL15Q9P015 296 aaKnown RBP12.89□□□□□ -0.35
COL6A2-203ENST00000397763 SLC13A4Q9UKG4 626 aa12.89□□□□□ -0.35
COL6A2-203ENST00000397763 ICKQ9UPZ9 632 aa12.89□□□□□ -0.35
COL6A2-203ENST00000397763 NCKAP1Q9Y2A7 1128 aa12.89□□□□□ -0.35
COL6A2-203ENST00000397763 CACNA1CQ13936 2221 aa12.89□□□□□ -0.35
COL6A2-203ENST00000397763 DENND4CQ5VZ89 1909 aa12.88□□□□□ -0.35
COL6A2-203ENST00000397763 A0A0A6YYJ9 748 aa12.88□□□□□ -0.35
COL6A2-203ENST00000397763 TEX46H3BTG2 121 aa12.88□□□□□ -0.35
COL6A2-203ENST00000397763 CXCL14O95715 111 aa12.88□□□□□ -0.35
COL6A2-203ENST00000397763 PCCBP05166 539 aa12.88□□□□□ -0.35
COL6A2-203ENST00000397763 ACADLP28330 430 aa12.88□□□□□ -0.35
COL6A2-203ENST00000397763 GABRA5P31644 462 aa12.88□□□□□ -0.35
COL6A2-203ENST00000397763 SOX9P48436 509 aa12.88□□□□□ -0.35
COL6A2-203ENST00000397763 CLCNKAP51800 687 aa12.88□□□□□ -0.35
COL6A2-203ENST00000397763 PPP3R1P63098 170 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms