RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 STX3Q13277 289 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 SF3B4Q15427 424 aaKnown RBP eCLIP6.2□□□□□ -1.42
SMCO1-201ENST00000397537 TAF13Q15543 124 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 MIIPQ5JXC2 388 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 MANEAQ5SRI9 462 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 OR4F3Q6IEY1 312 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 PRR23BQ6ZRT6 265 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 DPY19L4Q7Z388 723 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 SLC38A9Q8NBW4 561 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 SLC44A5Q8NCS7 719 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 FBXL13Q8NEE6 735 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 P3H4Q92791 437 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 CD101Q93033 1021 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 HAUS1Q96CS2 278 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 ZNF503Q96F45 646 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 ZNF274Q96GC6 653 aaPredicted RBP6.2□□□□□ -1.42
SMCO1-201ENST00000397537 SH3YL1Q96HL8 342 aaPredicted RBP6.2□□□□□ -1.42
SMCO1-201ENST00000397537 AKR1E2Q96JD6 320 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 DEFB118Q96PH6 123 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 TSSK3Q96PN8 268 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 TUBGCP2Q9BSJ2 902 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 Q9H8V8 135 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 RAVER2Q9HCJ3 691 aaKnown RBP6.2□□□□□ -1.42
SMCO1-201ENST00000397537 CHST11Q9NPF2 352 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 PPIAL4AQ9Y536 164 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 SIRT4Q9Y6E7 314 aaPredicted RBP6.2□□□□□ -1.42
SMCO1-201ENST00000397537 TMEM114B3SHH9 223 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 MSI1O43347 362 aaKnown RBP6.2□□□□□ -1.42
SMCO1-201ENST00000397537 ARHGEF15O94989 841 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 AHSA1O95433 338 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 CRYZL1O95825 349 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 PIGRP01833 764 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 SERPINE2P07093 398 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 H2AFB2P0C5Z0 115 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 TFPIP10646 304 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 HAPLN1P10915 354 aaPredicted RBP6.2□□□□□ -1.42
SMCO1-201ENST00000397537 GJB2P29033 226 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 GEMP55040 296 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 PSMC5P62195 406 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 SNRPNP63162 240 aaKnown RBP6.2□□□□□ -1.42
SMCO1-201ENST00000397537 NHLH2Q02577 135 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 NME3Q13232 169 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 GK3PQ14409 553 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 HEPACAMQ14CZ8 416 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 RNF151Q2KHN1 245 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 EIF2S3LQ2VIR3 472 aaKnown RBP6.2□□□□□ -1.42
SMCO1-201ENST00000397537 GPR141Q7Z602 305 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 B3GNT8Q7Z7M8 397 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 DHDDSQ86SQ9 333 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 SERPINA9Q86WD7 417 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 CCDC25Q86WR0 208 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 RNF130Q86XS8 419 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 TGIF2LXQ8IUE1 241 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 TBC1D10CQ8IV04 446 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 ADHFE1Q8IWW8 467 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 LINC00482Q8N8I6 264 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 CPEB3Q8NE35 698 aaKnown RBP6.2□□□□□ -1.42
SMCO1-201ENST00000397537 OR51G2Q8NGK0 314 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 OR4L1Q8NH43 312 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 FAM3CQ92520 227 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 ERGIC1Q969X5 290 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 FUBP1Q96AE4 644 aaKnown RBP6.2□□□□□ -1.42
SMCO1-201ENST00000397537 LGALS12Q96DT0 336 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 DHRS9Q9BPW9 319 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 LRRC1Q9BTT6 524 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 LRMDAQ9H2I8 198 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 SLC40A1Q9NP59 571 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 MYOZ2Q9NPC6 264 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 NLGN3Q9NZ94 848 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 PHF11Q9UIL8 331 aa6.2□□□□□ -1.42
SMCO1-201ENST00000397537 ZNF490Q9ULM2 529 aaPredicted RBP6.2□□□□□ -1.42
SMCO1-201ENST00000397537 CACNA1SQ13698 1873 aa6.19□□□□□ -1.42
SMCO1-201ENST00000397537 MROH7-TTC4A0A0A0MT08 1334 aa6.19□□□□□ -1.42
SMCO1-201ENST00000397537 LAMA3Q16787 3333 aa6.19□□□□□ -1.42
SMCO1-201ENST00000397537 ANKRD31Q8N7Z5 1873 aa6.19□□□□□ -1.42
SMCO1-201ENST00000397537 A0A1W2PQ67 120 aa6.19□□□□□ -1.42
SMCO1-201ENST00000397537 LRRC3CA6NJW4 275 aa6.19□□□□□ -1.42
SMCO1-201ENST00000397537 M0R296 226 aa6.19□□□□□ -1.42
SMCO1-201ENST00000397537 OXSR1O95747 527 aaPredicted RBP6.19□□□□□ -1.42
SMCO1-201ENST00000397537 MLNP12872 115 aa6.19□□□□□ -1.42
SMCO1-201ENST00000397537 PSMA2P25787 234 aa6.19□□□□□ -1.42
SMCO1-201ENST00000397537 SRD5A2P31213 254 aa6.19□□□□□ -1.42
SMCO1-201ENST00000397537 CNR2P34972 360 aa6.19□□□□□ -1.42
SMCO1-201ENST00000397537 PGGT1BP53609 377 aa6.19□□□□□ -1.42
SMCO1-201ENST00000397537 EMP2P54851 167 aa6.19□□□□□ -1.42
SMCO1-201ENST00000397537 NFYCQ13952 458 aa6.19□□□□□ -1.42
SMCO1-201ENST00000397537 GCKRQ14397 625 aa6.19□□□□□ -1.42
SMCO1-201ENST00000397537 GGTA1PQ4G0N0 100 aa6.19□□□□□ -1.42
SMCO1-201ENST00000397537 XKR4Q5GH76 650 aa6.19□□□□□ -1.42
SMCO1-201ENST00000397537 AARS2Q5JTZ9 985 aaKnown RBP6.19□□□□□ -1.42
SMCO1-201ENST00000397537 GGNBP1Q5YKI7 109 aa6.19□□□□□ -1.42
SMCO1-201ENST00000397537 ABHD12BQ7Z5M8 362 aaPredicted RBP6.19□□□□□ -1.42
SMCO1-201ENST00000397537 SNX20Q7Z614 316 aa6.19□□□□□ -1.42
SMCO1-201ENST00000397537 ZNF677Q86XU0 584 aa6.19□□□□□ -1.42
SMCO1-201ENST00000397537 CLVS1Q8IUQ0 354 aaPredicted RBP6.19□□□□□ -1.42
SMCO1-201ENST00000397537 DCUN1D3Q8IWE4 304 aa6.19□□□□□ -1.42
SMCO1-201ENST00000397537 PARP8Q8N3A8 854 aa6.19□□□□□ -1.42
SMCO1-201ENST00000397537 LINC01465Q8N7H1 131 aa6.19□□□□□ -1.42
SMCO1-201ENST00000397537 TXNDC5Q8NBS9 432 aaKnown RBP6.19□□□□□ -1.42
SMCO1-201ENST00000397537 PPFIBP2Q8ND30 876 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms