RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 GTF3C1Q12789 2109 aa23.22■■□□□ 1.31
TSPAN4-207ENST00000397411 DUSP5Q16690 384 aa23.22■■□□□ 1.31
TSPAN4-207ENST00000397411 CDC73Q6P1J9 531 aa23.22■■□□□ 1.31
TSPAN4-207ENST00000397411 TMEM81Q6P7N7 255 aa23.22■■□□□ 1.31
TSPAN4-207ENST00000397411 FAM26EQ8N5C1 309 aa23.22■■□□□ 1.31
TSPAN4-207ENST00000397411 TMEM41AQ96HV5 264 aa23.22■■□□□ 1.31
TSPAN4-207ENST00000397411 PANX1Q96RD7 426 aa23.22■■□□□ 1.31
TSPAN4-207ENST00000397411 SIKE1Q9BRV8 207 aa23.22■■□□□ 1.31
TSPAN4-207ENST00000397411 PIGUQ9H490 435 aa23.22■■□□□ 1.31
TSPAN4-207ENST00000397411 GALNT9Q9HCQ5 603 aa23.22■■□□□ 1.31
TSPAN4-207ENST00000397411 BTNL2Q9UIR0 455 aa23.22■■□□□ 1.31
TSPAN4-207ENST00000397411 A0A1B0GTH9 108 aa23.21■■□□□ 1.31
TSPAN4-207ENST00000397411 SLC19A2O60779 497 aa23.21■■□□□ 1.31
TSPAN4-207ENST00000397411 SCN2BO60939 215 aa23.21■■□□□ 1.31
TSPAN4-207ENST00000397411 TROVE2P10155 538 aaKnown RBP eCLIP23.21■■□□□ 1.31
TSPAN4-207ENST00000397411 MATN1P21941 496 aa23.21■■□□□ 1.31
TSPAN4-207ENST00000397411 MAP3K8P41279 467 aa23.21■■□□□ 1.31
TSPAN4-207ENST00000397411 POU6F2P78424 691 aaPredicted RBP23.21■■□□□ 1.31
TSPAN4-207ENST00000397411 FIGNL1Q6PIW4 674 aa23.21■■□□□ 1.31
TSPAN4-207ENST00000397411 ZNF621Q6ZSS3 439 aa23.21■■□□□ 1.31
TSPAN4-207ENST00000397411 SPPL2CQ8IUH8 684 aa23.21■■□□□ 1.31
TSPAN4-207ENST00000397411 CLEC4FQ8N1N0 589 aa23.21■■□□□ 1.31
TSPAN4-207ENST00000397411 TRIML2Q8N7C3 387 aa23.21■■□□□ 1.31
TSPAN4-207ENST00000397411 RFWD2Q8NHY2 731 aa23.21■■□□□ 1.31
TSPAN4-207ENST00000397411 HOXB13Q92826 284 aaPredicted RBP23.21■■□□□ 1.31
TSPAN4-207ENST00000397411 CDS1Q92903 461 aa23.21■■□□□ 1.31
TSPAN4-207ENST00000397411 SLC35G5Q96KT7 338 aa23.21■■□□□ 1.31
TSPAN4-207ENST00000397411 GNRHR2Q96P88 292 aa23.21■■□□□ 1.31
TSPAN4-207ENST00000397411 STACQ99469 402 aa23.21■■□□□ 1.31
TSPAN4-207ENST00000397411 BTBD2Q9BX70 525 aa23.21■■□□□ 1.31
TSPAN4-207ENST00000397411 RMND5AQ9H871 391 aa23.21■■□□□ 1.31
TSPAN4-207ENST00000397411 ZDHHC11Q9H8X9 412 aa23.21■■□□□ 1.31
TSPAN4-207ENST00000397411 SDHAF3Q9NRP4 125 aa23.21■■□□□ 1.31
TSPAN4-207ENST00000397411 SH3BGRL2Q9UJC5 107 aa23.21■■□□□ 1.31
TSPAN4-207ENST00000397411 A0A0G2JND7 137 aa23.2■■□□□ 1.3
TSPAN4-207ENST00000397411 A0A1B0GUH1 482 aa23.2■■□□□ 1.3
TSPAN4-207ENST00000397411 RFPL3SP0C7P2 107 aa23.2■■□□□ 1.3
TSPAN4-207ENST00000397411 NCF2P19878 526 aaPredicted RBP23.2■■□□□ 1.3
TSPAN4-207ENST00000397411 ELAVL4P26378 380 aaKnown RBP23.2■■□□□ 1.3
TSPAN4-207ENST00000397411 PTGS2P35354 604 aa23.2■■□□□ 1.3
TSPAN4-207ENST00000397411 TIGD3Q6B0B8 471 aa23.2■■□□□ 1.3
TSPAN4-207ENST00000397411 ARHGAP11AQ6P4F7 1023 aa23.2■■□□□ 1.3
TSPAN4-207ENST00000397411 CCDC115Q96NT0 180 aa23.2■■□□□ 1.3
TSPAN4-207ENST00000397411 G6PC3Q9BUM1 346 aa23.2■■□□□ 1.3
TSPAN4-207ENST00000397411 DUSP22Q9NRW4 184 aa23.2■■□□□ 1.3
TSPAN4-207ENST00000397411 GPATCH2Q9NW75 528 aa23.2■■□□□ 1.3
TSPAN4-207ENST00000397411 GIN1Q9NXP7 522 aa23.2■■□□□ 1.3
TSPAN4-207ENST00000397411 QPCTLQ9NXS2 382 aa23.2■■□□□ 1.3
TSPAN4-207ENST00000397411 SLC5A6Q9Y289 635 aa23.2■■□□□ 1.3
TSPAN4-207ENST00000397411 GCN1Q92616 2671 aaKnown RBP23.19■■□□□ 1.3
TSPAN4-207ENST00000397411 MYO18BQ8IUG5 2567 aa23.19■■□□□ 1.3
TSPAN4-207ENST00000397411 FAM234BA2RU67 622 aa23.19■■□□□ 1.3
TSPAN4-207ENST00000397411 CCDC154A6NI56 674 aa23.19■■□□□ 1.3
TSPAN4-207ENST00000397411 LRRC3CA6NJW4 275 aa23.19■■□□□ 1.3
TSPAN4-207ENST00000397411 DUXAA6NLW8 204 aa23.19■■□□□ 1.3
TSPAN4-207ENST00000397411 ZNHIT1O43257 154 aa23.19■■□□□ 1.3
TSPAN4-207ENST00000397411 LRRTM2O43300 516 aa23.19■■□□□ 1.3
TSPAN4-207ENST00000397411 SCO2O43819 266 aa23.19■■□□□ 1.3
TSPAN4-207ENST00000397411 KCNK2O95069 426 aa23.19■■□□□ 1.3
TSPAN4-207ENST00000397411 UTS2O95399 124 aa23.19■■□□□ 1.3
TSPAN4-207ENST00000397411 ATP6V1C1P21283 382 aa23.19■■□□□ 1.3
TSPAN4-207ENST00000397411 EVI2BP34910 448 aa23.19■■□□□ 1.3
TSPAN4-207ENST00000397411 MAN2A2P49641 1150 aa23.19■■□□□ 1.3
TSPAN4-207ENST00000397411 UBAP2LQ14157 1087 aaKnown RBP23.19■■□□□ 1.3
TSPAN4-207ENST00000397411 C1QL3Q5VWW1 255 aa23.19■■□□□ 1.3
TSPAN4-207ENST00000397411 GALNT10Q86SR1 603 aa23.19■■□□□ 1.3
TSPAN4-207ENST00000397411 DTNBP1Q96EV8 351 aa23.19■■□□□ 1.3
TSPAN4-207ENST00000397411 OR7D2Q96RA2 312 aa23.19■■□□□ 1.3
TSPAN4-207ENST00000397411 TBL1XR1Q9BZK7 514 aa23.19■■□□□ 1.3
TSPAN4-207ENST00000397411 ZNF703Q9H7S9 590 aaPredicted RBP23.19■■□□□ 1.3
TSPAN4-207ENST00000397411 TRIM33Q9UPN9 1127 aa23.19■■□□□ 1.3
TSPAN4-207ENST00000397411 TRGV5A0A0B4J1U4 118 aa23.18■■□□□ 1.3
TSPAN4-207ENST00000397411 RFXANKO14593 260 aa23.18■■□□□ 1.3
TSPAN4-207ENST00000397411 PRRG2O14669 202 aa23.18■■□□□ 1.3
TSPAN4-207ENST00000397411 ANP32DO95626 131 aa23.18■■□□□ 1.3
TSPAN4-207ENST00000397411 IGKV1D-16P01601 117 aa23.18■■□□□ 1.3
TSPAN4-207ENST00000397411 STSP08842 583 aa23.18■■□□□ 1.3
TSPAN4-207ENST00000397411 CELA3AP09093 270 aa23.18■■□□□ 1.3
TSPAN4-207ENST00000397411 HPGDP15428 266 aa23.18■■□□□ 1.3
TSPAN4-207ENST00000397411 MDH1P40925 334 aaKnown RBP23.18■■□□□ 1.3
TSPAN4-207ENST00000397411 PTGDSP41222 190 aa23.18■■□□□ 1.3
TSPAN4-207ENST00000397411 RPS26P62854 115 aaKnown RBP23.18■■□□□ 1.3
TSPAN4-207ENST00000397411 C4orf17Q53FE4 359 aa23.18■■□□□ 1.3
TSPAN4-207ENST00000397411 CCNJQ5T5M9 372 aa23.18■■□□□ 1.3
TSPAN4-207ENST00000397411 OR9I1Q8NGQ6 314 aa23.18■■□□□ 1.3
TSPAN4-207ENST00000397411 SLC35A5Q9BS91 424 aa23.18■■□□□ 1.3
TSPAN4-207ENST00000397411 INPP5KQ9BT40 448 aa23.18■■□□□ 1.3
TSPAN4-207ENST00000397411 FGFR1OP2Q9NVK5 253 aa23.18■■□□□ 1.3
TSPAN4-207ENST00000397411 ABCG2Q9UNQ0 655 aa23.18■■□□□ 1.3
TSPAN4-207ENST00000397411 C15orf41Q9Y2V0 281 aa23.18■■□□□ 1.3
TSPAN4-207ENST00000397411 WIF1Q9Y5W5 379 aa23.18■■□□□ 1.3
TSPAN4-207ENST00000397411 FREM3P0C091 2139 aa23.18■■□□□ 1.3
TSPAN4-207ENST00000397411 DYNC1I1O14576 645 aa23.17■■□□□ 1.3
TSPAN4-207ENST00000397411 SNPHO15079 494 aa23.17■■□□□ 1.3
TSPAN4-207ENST00000397411 SEMA7AO75326 666 aa23.17■■□□□ 1.3
TSPAN4-207ENST00000397411 CBR3O75828 277 aa23.17■■□□□ 1.3
TSPAN4-207ENST00000397411 GSNP06396 782 aa23.17■■□□□ 1.3
TSPAN4-207ENST00000397411 TPOP07202 933 aa23.17■■□□□ 1.3
TSPAN4-207ENST00000397411 ESRRAP11474 423 aaPredicted RBP23.17■■□□□ 1.3
TSPAN4-207ENST00000397411 TRPC1P48995 793 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms