RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 CDS1Q92903 461 aa19.41■□□□□ 0.7
TSPAN4-206ENST00000397408 SLC35G5Q96KT7 338 aa19.41■□□□□ 0.7
TSPAN4-206ENST00000397408 STACQ99469 402 aa19.41■□□□□ 0.7
TSPAN4-206ENST00000397408 DUSP22Q9NRW4 184 aa19.41■□□□□ 0.7
TSPAN4-206ENST00000397408 ASNA1O43681 348 aa19.4■□□□□ 0.7
TSPAN4-206ENST00000397408 ICOSLGO75144 302 aa19.4■□□□□ 0.7
TSPAN4-206ENST00000397408 IGKV1D-16P01601 117 aa19.4■□□□□ 0.7
TSPAN4-206ENST00000397408 NCF2P19878 526 aaPredicted RBP19.4■□□□□ 0.7
TSPAN4-206ENST00000397408 PTGDSP41222 190 aa19.4■□□□□ 0.7
TSPAN4-206ENST00000397408 CDKN2CP42773 168 aa19.4■□□□□ 0.7
TSPAN4-206ENST00000397408 SNTA1Q13424 505 aa19.4■□□□□ 0.7
TSPAN4-206ENST00000397408 KRTCAP3Q53RY4 240 aa19.4■□□□□ 0.7
TSPAN4-206ENST00000397408 CMPK2Q5EBM0 449 aa19.4■□□□□ 0.7
TSPAN4-206ENST00000397408 SLC30A6Q6NXT4 461 aa19.4■□□□□ 0.7
TSPAN4-206ENST00000397408 FIGNL1Q6PIW4 674 aa19.4■□□□□ 0.7
TSPAN4-206ENST00000397408 DNAJC14Q6Y2X3 702 aaPredicted RBP19.4■□□□□ 0.7
TSPAN4-206ENST00000397408 PACS2Q86VP3 889 aa19.4■□□□□ 0.7
TSPAN4-206ENST00000397408 FAM109AQ8N4B1 249 aa19.4■□□□□ 0.7
TSPAN4-206ENST00000397408 GOT1L1Q8NHS2 421 aaPredicted RBP19.4■□□□□ 0.7
TSPAN4-206ENST00000397408 ADAMTS15Q8TE58 950 aa19.4■□□□□ 0.7
TSPAN4-206ENST00000397408 VPS33AQ96AX1 596 aa19.4■□□□□ 0.7
TSPAN4-206ENST00000397408 SLC35A5Q9BS91 424 aa19.4■□□□□ 0.7
TSPAN4-206ENST00000397408 PIGUQ9H490 435 aa19.4■□□□□ 0.7
TSPAN4-206ENST00000397408 SERHL2Q9H4I8 314 aa19.4■□□□□ 0.7
TSPAN4-206ENST00000397408 ZNF703Q9H7S9 590 aaPredicted RBP19.4■□□□□ 0.7
TSPAN4-206ENST00000397408 CCDC167Q9P0B6 97 aa19.4■□□□□ 0.7
TSPAN4-206ENST00000397408 TRIM33Q9UPN9 1127 aa19.4■□□□□ 0.7
TSPAN4-206ENST00000397408 CDC40O60508 579 aaKnown RBP eCLIP19.39■□□□□ 0.692e-6■■■■■ 31.7
TSPAN4-206ENST00000397408 KCNK2O95069 426 aa19.39■□□□□ 0.69
TSPAN4-206ENST00000397408 MAGEA5P43359 124 aa19.39■□□□□ 0.69
TSPAN4-206ENST00000397408 MAN2A2P49641 1150 aa19.39■□□□□ 0.69
TSPAN4-206ENST00000397408 IRX1P78414 480 aaPredicted RBP19.39■□□□□ 0.69
TSPAN4-206ENST00000397408 POU6F2P78424 691 aaPredicted RBP19.39■□□□□ 0.69
TSPAN4-206ENST00000397408 HSF1Q00613 529 aa19.39■□□□□ 0.69
TSPAN4-206ENST00000397408 RCAN2Q14206 197 aa19.39■□□□□ 0.69
TSPAN4-206ENST00000397408 HYAL4Q2M3T9 481 aa19.39■□□□□ 0.69
TSPAN4-206ENST00000397408 EIF2S3LQ2VIR3 472 aaKnown RBP19.39■□□□□ 0.69
TSPAN4-206ENST00000397408 CCNJQ5T5M9 372 aa19.39■□□□□ 0.69
TSPAN4-206ENST00000397408 BNC2Q6ZN30 1099 aaPredicted RBP19.39■□□□□ 0.69
TSPAN4-206ENST00000397408 MSANTD1Q6ZTZ1 278 aa19.39■□□□□ 0.69
TSPAN4-206ENST00000397408 GHDCQ8N2G8 530 aa19.39■□□□□ 0.69
TSPAN4-206ENST00000397408 TRIML2Q8N7C3 387 aa19.39■□□□□ 0.69
TSPAN4-206ENST00000397408 OR5D16Q8NGK9 328 aa19.39■□□□□ 0.69
TSPAN4-206ENST00000397408 TMEM41AQ96HV5 264 aa19.39■□□□□ 0.69
TSPAN4-206ENST00000397408 ZNF317Q96PQ6 595 aaPredicted RBP19.39■□□□□ 0.69
TSPAN4-206ENST00000397408 OR7D2Q96RA2 312 aa19.39■□□□□ 0.69
TSPAN4-206ENST00000397408 BTBD2Q9BX70 525 aa19.39■□□□□ 0.69
TSPAN4-206ENST00000397408 DEFB127Q9H1M4 99 aa19.39■□□□□ 0.69
TSPAN4-206ENST00000397408 RMND5AQ9H871 391 aa19.39■□□□□ 0.69
TSPAN4-206ENST00000397408 ZDHHC11Q9H8X9 412 aa19.39■□□□□ 0.69
TSPAN4-206ENST00000397408 SERHLQ9NQF3 203 aa19.39■□□□□ 0.69
TSPAN4-206ENST00000397408 GIN1Q9NXP7 522 aa19.39■□□□□ 0.69
TSPAN4-206ENST00000397408 FLRT3Q9NZU0 649 aa19.39■□□□□ 0.69
TSPAN4-206ENST00000397408 B4GALT7Q9UBV7 327 aa19.39■□□□□ 0.69
TSPAN4-206ENST00000397408 TENM4Q6N022 2769 aa19.38■□□□□ 0.69
TSPAN4-206ENST00000397408 ZNF407Q9C0G0 2248 aa19.38■□□□□ 0.69
TSPAN4-206ENST00000397408 C2orf72A6NCS6 295 aa19.38■□□□□ 0.69
TSPAN4-206ENST00000397408 CCDC154A6NI56 674 aa19.38■□□□□ 0.69
TSPAN4-206ENST00000397408 NR5A2O00482 541 aa19.38■□□□□ 0.69
TSPAN4-206ENST00000397408 RFXANKO14593 260 aa19.38■□□□□ 0.69
TSPAN4-206ENST00000397408 GNB5O14775 395 aa19.38■□□□□ 0.69
TSPAN4-206ENST00000397408 UTS2O95399 124 aa19.38■□□□□ 0.69
TSPAN4-206ENST00000397408 GSNP06396 782 aa19.38■□□□□ 0.69
TSPAN4-206ENST00000397408 RFPL3SP0C7P2 107 aa19.38■□□□□ 0.69
TSPAN4-206ENST00000397408 MATN1P21941 496 aa19.38■□□□□ 0.69
TSPAN4-206ENST00000397408 EVI2BP34910 448 aa19.38■□□□□ 0.69
TSPAN4-206ENST00000397408 CHI3L1P36222 383 aaPredicted RBP19.38■□□□□ 0.69
TSPAN4-206ENST00000397408 CASP9P55211 416 aa19.38■□□□□ 0.69
TSPAN4-206ENST00000397408 KCNC4Q03721 635 aa19.38■□□□□ 0.69
TSPAN4-206ENST00000397408 FNDC7Q5VTL7 733 aa19.38■□□□□ 0.69
TSPAN4-206ENST00000397408 SAXO2Q658L1 398 aa19.38■□□□□ 0.69
TSPAN4-206ENST00000397408 ANGPTL8Q6UXH0 198 aa19.38■□□□□ 0.69
TSPAN4-206ENST00000397408 ZNF621Q6ZSS3 439 aa19.38■□□□□ 0.69
TSPAN4-206ENST00000397408 FUNDC1Q8IVP5 155 aa19.38■□□□□ 0.69
TSPAN4-206ENST00000397408 PRR7Q8TB68 274 aa19.38■□□□□ 0.69
TSPAN4-206ENST00000397408 RNF138Q8WVD3 245 aa19.38■□□□□ 0.69
TSPAN4-206ENST00000397408 NTNG2Q96CW9 530 aa19.38■□□□□ 0.69
TSPAN4-206ENST00000397408 NEURL3Q96EH8 262 aa19.38■□□□□ 0.69
TSPAN4-206ENST00000397408 ZNF385DQ9H6B1 395 aa19.38■□□□□ 0.69
TSPAN4-206ENST00000397408 WIF1Q9Y5W5 379 aa19.38■□□□□ 0.69
TSPAN4-206ENST00000397408 KCNE3Q9Y6H6 103 aa19.38■□□□□ 0.69
TSPAN4-206ENST00000397408 HIVEP3Q5T1R4 2406 aa19.38■□□□□ 0.69
TSPAN4-206ENST00000397408 SCO2O43819 266 aa19.37■□□□□ 0.69
TSPAN4-206ENST00000397408 CELA3AP09093 270 aa19.37■□□□□ 0.69
TSPAN4-206ENST00000397408 ARFIP2P53365 341 aa19.37■□□□□ 0.69
TSPAN4-206ENST00000397408 RBPJQ06330 500 aa19.37■□□□□ 0.69
TSPAN4-206ENST00000397408 CPEB4Q17RY0 729 aaKnown RBP eCLIP19.37■□□□□ 0.69
TSPAN4-206ENST00000397408 AGKQ53H12 422 aa19.37■□□□□ 0.69
TSPAN4-206ENST00000397408 FAM110BQ8TC76 370 aa19.37■□□□□ 0.69
TSPAN4-206ENST00000397408 ITCHQ96J02 903 aa19.37■□□□□ 0.69
TSPAN4-206ENST00000397408 RABEP2Q9H5N1 569 aa19.37■□□□□ 0.69
TSPAN4-206ENST00000397408 ABCG2Q9UNQ0 655 aa19.37■□□□□ 0.69
TSPAN4-206ENST00000397408 OSGIN2Q9Y236 505 aa19.37■□□□□ 0.69
TSPAN4-206ENST00000397408 FLNCQ14315 2725 aa19.37■□□□□ 0.69
TSPAN4-206ENST00000397408 SNPHO15079 494 aa19.36■□□□□ 0.69
TSPAN4-206ENST00000397408 PDE9AO76083 593 aa19.36■□□□□ 0.69
TSPAN4-206ENST00000397408 ELAVL4P26378 380 aaKnown RBP19.36■□□□□ 0.69
TSPAN4-206ENST00000397408 GDF1P27539 372 aa19.36■□□□□ 0.69
TSPAN4-206ENST00000397408 C6orf10Q5SRN2 563 aa19.36■□□□□ 0.69
TSPAN4-206ENST00000397408 DCST2Q5T1A1 773 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms