RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 EMX2Q04743 252 aa13.35□□□□□ -0.27
SEC13-208ENST00000397109 MAD2L1Q13257 205 aaPredicted RBP13.35□□□□□ -0.27
SEC13-208ENST00000397109 SNTA1Q13424 505 aa13.35□□□□□ -0.27
SEC13-208ENST00000397109 GSTA3Q16772 222 aa13.35□□□□□ -0.27
SEC13-208ENST00000397109 SPATA19Q7Z5L4 167 aa13.35□□□□□ -0.27
SEC13-208ENST00000397109 OR7G2Q8NG99 324 aa13.35□□□□□ -0.27
SEC13-208ENST00000397109 TSPEARQ8WU66 669 aa13.35□□□□□ -0.27
SEC13-208ENST00000397109 MTERF3Q96E29 417 aa13.35□□□□□ -0.27
SEC13-208ENST00000397109 JSRP1Q96MG2 331 aaPredicted RBP13.35□□□□□ -0.27
SEC13-208ENST00000397109 VSTM2LQ96N03 204 aa13.35□□□□□ -0.27
SEC13-208ENST00000397109 AMDHD1Q96NU7 426 aa13.35□□□□□ -0.27
SEC13-208ENST00000397109 TP63Q9H3D4 680 aaPredicted RBP13.35□□□□□ -0.27
SEC13-208ENST00000397109 GLIPR2Q9H4G4 154 aa13.35□□□□□ -0.27
SEC13-208ENST00000397109 ZNF703Q9H7S9 590 aaPredicted RBP13.35□□□□□ -0.27
SEC13-208ENST00000397109 METTL7AQ9H8H3 244 aa13.35□□□□□ -0.27
SEC13-208ENST00000397109 EFCAB1Q9HAE3 211 aa13.35□□□□□ -0.27
SEC13-208ENST00000397109 FOLH1BQ9HBA9 442 aa13.35□□□□□ -0.27
SEC13-208ENST00000397109 ACKR4Q9NPB9 350 aa13.35□□□□□ -0.27
SEC13-208ENST00000397109 KLF2Q9Y5W3 355 aaPredicted RBP13.35□□□□□ -0.27
SEC13-208ENST00000397109 EXPH5Q8NEV8 1989 aa13.34□□□□□ -0.27
SEC13-208ENST00000397109 FREM3P0C091 2139 aa13.34□□□□□ -0.27
SEC13-208ENST00000397109 TRGV5A0A0B4J1U4 118 aa13.34□□□□□ -0.27
SEC13-208ENST00000397109 OR6C70A6NIJ9 312 aa13.34□□□□□ -0.27
SEC13-208ENST00000397109 LRRC3CA6NJW4 275 aa13.34□□□□□ -0.27
SEC13-208ENST00000397109 NPIPA2E9PIF3 369 aa13.34□□□□□ -0.27
SEC13-208ENST00000397109 NPIPA3F8WFD2 350 aa13.34□□□□□ -0.27
SEC13-208ENST00000397109 PDPK1O15530 556 aa13.34□□□□□ -0.27
SEC13-208ENST00000397109 REM1O75628 298 aa13.34□□□□□ -0.27
SEC13-208ENST00000397109 LRATO95237 230 aa13.34□□□□□ -0.27
SEC13-208ENST00000397109 CT45A8P0DMV1 189 aa13.34□□□□□ -0.27
SEC13-208ENST00000397109 CT45A9P0DMV2 189 aa13.34□□□□□ -0.27
SEC13-208ENST00000397109 RPL3P39023 403 aaKnown RBP13.34□□□□□ -0.27
SEC13-208ENST00000397109 MASP1P48740 699 aa13.34□□□□□ -0.27
SEC13-208ENST00000397109 MRPS22P82650 360 aaKnown RBP13.34□□□□□ -0.27
SEC13-208ENST00000397109 ADORA2A-AS1P86434 159 aa13.34□□□□□ -0.27
SEC13-208ENST00000397109 PRSS53Q2L4Q9 553 aa13.34□□□□□ -0.27
SEC13-208ENST00000397109 CT45A2Q5DJT8 189 aa13.34□□□□□ -0.27
SEC13-208ENST00000397109 SLC30A6Q6NXT4 461 aa13.34□□□□□ -0.27
SEC13-208ENST00000397109 C16orf89Q6UX73 402 aa13.34□□□□□ -0.27
SEC13-208ENST00000397109 R3HCC1LQ7Z5L2 792 aaKnown RBP13.34□□□□□ -0.27
SEC13-208ENST00000397109 NET1Q7Z628 596 aaPredicted RBP13.34□□□□□ -0.27
SEC13-208ENST00000397109 FNDC5Q8NAU1 212 aa13.34□□□□□ -0.27
SEC13-208ENST00000397109 ZFP28Q8NHY6 868 aa13.34□□□□□ -0.27
SEC13-208ENST00000397109 HGDQ93099 445 aa13.34□□□□□ -0.27
SEC13-208ENST00000397109 GFM2Q969S9 779 aaKnown RBP13.34□□□□□ -0.27
SEC13-208ENST00000397109 SARAFQ96BY9 339 aa13.34□□□□□ -0.27
SEC13-208ENST00000397109 PPCDCQ96CD2 204 aa13.34□□□□□ -0.27
SEC13-208ENST00000397109 TMCO6Q96DC7 493 aa13.34□□□□□ -0.27
SEC13-208ENST00000397109 ZBED6CLQ96FA7 236 aaPredicted RBP13.34□□□□□ -0.27
SEC13-208ENST00000397109 TMEM41AQ96HV5 264 aa13.34□□□□□ -0.27
SEC13-208ENST00000397109 PPP1R36Q96LQ0 422 aa13.34□□□□□ -0.27
SEC13-208ENST00000397109 COL21A1Q96P44 957 aa13.34□□□□□ -0.27
SEC13-208ENST00000397109 TSSK3Q96PN8 268 aa13.34□□□□□ -0.27
SEC13-208ENST00000397109 DMRTA2Q96SC8 542 aa13.34□□□□□ -0.27
SEC13-208ENST00000397109 EXO5Q9H790 373 aa13.34□□□□□ -0.27
SEC13-208ENST00000397109 ANKRA2Q9H9E1 313 aa13.34□□□□□ -0.27
SEC13-208ENST00000397109 SH3BP4Q9P0V3 963 aa13.34□□□□□ -0.27
SEC13-208ENST00000397109 GIMAP2Q9UG22 337 aa13.34□□□□□ -0.27
SEC13-208ENST00000397109 PRPF19Q9UMS4 504 aaKnown RBP13.34□□□□□ -0.27
SEC13-208ENST00000397109 C19orf53Q9UNZ5 99 aaPredicted RBP13.34□□□□□ -0.27
SEC13-208ENST00000397109 TTC36A6NLP5 189 aa13.33□□□□□ -0.28
SEC13-208ENST00000397109 ADAM10O14672 748 aa13.33□□□□□ -0.28
SEC13-208ENST00000397109 AKAP10O43572 662 aa13.33□□□□□ -0.28
SEC13-208ENST00000397109 RFPL3SP0C7P2 107 aa13.33□□□□□ -0.28
SEC13-208ENST00000397109 PRPS2P11908 318 aa13.33□□□□□ -0.28
SEC13-208ENST00000397109 BCKDHAP12694 445 aa13.33□□□□□ -0.28
SEC13-208ENST00000397109 ELAVL4P26378 380 aaKnown RBP13.33□□□□□ -0.28
SEC13-208ENST00000397109 GDF1P27539 372 aa13.33□□□□□ -0.28
SEC13-208ENST00000397109 MC3RP41968 323 aa13.33□□□□□ -0.28
SEC13-208ENST00000397109 STX1BP61266 288 aa13.33□□□□□ -0.28
SEC13-208ENST00000397109 PDE7AQ13946 482 aa13.33□□□□□ -0.28
SEC13-208ENST00000397109 EFR3AQ14156 821 aa13.33□□□□□ -0.28
SEC13-208ENST00000397109 TRMT5Q32P41 509 aaKnown RBP13.33□□□□□ -0.28
SEC13-208ENST00000397109 GXYLT1Q4G148 440 aa13.33□□□□□ -0.28
SEC13-208ENST00000397109 HIST2H2BCQ6DN03 193 aa13.33□□□□□ -0.28
SEC13-208ENST00000397109 TMEM107Q6UX40 140 aa13.33□□□□□ -0.28
SEC13-208ENST00000397109 OR2L13Q8N349 312 aa13.33□□□□□ -0.28
SEC13-208ENST00000397109 LIX1Q8N485 282 aa13.33□□□□□ -0.28
SEC13-208ENST00000397109 TMBIM1Q969X1 311 aa13.33□□□□□ -0.28
SEC13-208ENST00000397109 NTNG2Q96CW9 530 aa13.33□□□□□ -0.28
SEC13-208ENST00000397109 ELP4Q96EB1 424 aa13.33□□□□□ -0.28
SEC13-208ENST00000397109 DDX18Q9NVP1 670 aaKnown RBP13.33□□□□□ -0.28
SEC13-208ENST00000397109 NOP53Q9NZM5 478 aaKnown RBP13.33□□□□□ -0.28
SEC13-208ENST00000397109 BAIAP2L1Q9UHR4 511 aa13.33□□□□□ -0.28
SEC13-208ENST00000397109 LIPGQ9Y5X9 500 aa13.33□□□□□ -0.28
SEC13-208ENST00000397109 FIGNL2A6NMB9 653 aa13.32□□□□□ -0.28
SEC13-208ENST00000397109 UPK1AO00322 258 aa13.32□□□□□ -0.28
SEC13-208ENST00000397109 UGT2B11O75310 529 aa13.32□□□□□ -0.28
SEC13-208ENST00000397109 CIB2O75838 187 aa13.32□□□□□ -0.28
SEC13-208ENST00000397109 HOXD4P09016 255 aaPredicted RBP13.32□□□□□ -0.28
SEC13-208ENST00000397109 CELA3AP09093 270 aa13.32□□□□□ -0.28
SEC13-208ENST00000397109 ALDOCP09972 364 aaKnown RBP13.32□□□□□ -0.28
SEC13-208ENST00000397109 IDO1P14902 403 aa13.32□□□□□ -0.28
SEC13-208ENST00000397109 IL12BP29460 328 aa13.32□□□□□ -0.28
SEC13-208ENST00000397109 HPCAL1P37235 193 aa13.32□□□□□ -0.28
SEC13-208ENST00000397109 PNLIPRP2P54317 469 aa13.32□□□□□ -0.28
SEC13-208ENST00000397109 C21orf58P58505 322 aa13.32□□□□□ -0.28
SEC13-208ENST00000397109 ZNF155Q12901 538 aaPredicted RBP13.32□□□□□ -0.28
SEC13-208ENST00000397109 ZNHIT3Q15649 155 aaPredicted RBP13.32□□□□□ -0.28
SEC13-208ENST00000397109 CYP27C1Q4G0S4 372 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms