RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 TCRBV9S1A1TA0A576 114 aa13.39□□□□□ -0.27
SEC13-206ENST00000397102 CCDC189A1A4V9 331 aa13.39□□□□□ -0.27
SEC13-206ENST00000397102 FAM159BA6NKW6 160 aa13.39□□□□□ -0.27
SEC13-206ENST00000397102 PLGP00747 810 aaPredicted RBP13.39□□□□□ -0.27
SEC13-206ENST00000397102 CRABP2P29373 138 aa13.39□□□□□ -0.27
SEC13-206ENST00000397102 ZNF844Q08AG5 666 aa13.39□□□□□ -0.27
SEC13-206ENST00000397102 GLYR1Q49A26 553 aaPredicted RBP13.39□□□□□ -0.27
SEC13-206ENST00000397102 ZNF628Q5EBL2 1059 aa13.39□□□□□ -0.27
SEC13-206ENST00000397102 GRTP1Q5TC63 336 aa13.39□□□□□ -0.27
SEC13-206ENST00000397102 FRG2Q64ET8 278 aa13.39□□□□□ -0.27
SEC13-206ENST00000397102 METTL2BQ6P1Q9 378 aaKnown RBP13.39□□□□□ -0.27
SEC13-206ENST00000397102 NPSR1Q6W5P4 371 aa13.39□□□□□ -0.27
SEC13-206ENST00000397102 CYS1Q717R9 158 aa13.39□□□□□ -0.27
SEC13-206ENST00000397102 COMMD6Q7Z4G1 85 aa13.39□□□□□ -0.27
SEC13-206ENST00000397102 GAS2L3Q86XJ1 694 aa13.39□□□□□ -0.27
SEC13-206ENST00000397102 OR5M1Q8NGP8 315 aa13.39□□□□□ -0.27
SEC13-206ENST00000397102 EFHD2Q96C19 240 aaPredicted RBP13.39□□□□□ -0.27
SEC13-206ENST00000397102 ERP27Q96DN0 273 aa13.39□□□□□ -0.27
SEC13-206ENST00000397102 VSTM2LQ96N03 204 aa13.39□□□□□ -0.27
SEC13-206ENST00000397102 CDK15Q96Q40 435 aa13.39□□□□□ -0.27
SEC13-206ENST00000397102 FRG2BQ96QU4 278 aa13.39□□□□□ -0.27
SEC13-206ENST00000397102 PRRG4Q9BZD6 226 aa13.39□□□□□ -0.27
SEC13-206ENST00000397102 BARX1Q9HBU1 254 aaPredicted RBP13.39□□□□□ -0.27
SEC13-206ENST00000397102 SDHAF3Q9NRP4 125 aa13.39□□□□□ -0.27
SEC13-206ENST00000397102 MED11Q9P086 117 aa13.39□□□□□ -0.27
SEC13-206ENST00000397102 SNX12Q9UMY4 172 aa13.39□□□□□ -0.27
SEC13-206ENST00000397102 TNPO3Q9Y5L0 923 aaKnown RBP13.39□□□□□ -0.27
SEC13-206ENST00000397102 ANK2Q01484 3957 aa13.39□□□□□ -0.27
SEC13-206ENST00000397102 YLPM1P49750 1951 aaKnown RBP13.38□□□□□ -0.27
SEC13-206ENST00000397102 A0A1W2PP18 115 aa13.38□□□□□ -0.27
SEC13-206ENST00000397102 CLOCKO15516 846 aa13.38□□□□□ -0.27
SEC13-206ENST00000397102 GPRIN2O60269 458 aa13.38□□□□□ -0.27
SEC13-206ENST00000397102 CD3EP07766 207 aa13.38□□□□□ -0.27
SEC13-206ENST00000397102 ARL1P40616 181 aaPredicted RBP13.38□□□□□ -0.27
SEC13-206ENST00000397102 SLC6A8P48029 635 aa13.38□□□□□ -0.27
SEC13-206ENST00000397102 ERCC6LQ2NKX8 1250 aa13.38□□□□□ -0.27
SEC13-206ENST00000397102 CTU2Q2VPK5 515 aaKnown RBP13.38□□□□□ -0.27
SEC13-206ENST00000397102 NCMAPQ5T1S8 102 aa13.38□□□□□ -0.27
SEC13-206ENST00000397102 TTC19Q6DKK2 380 aaPredicted RBP13.38□□□□□ -0.27
SEC13-206ENST00000397102 PPP4R4Q6NUP7 873 aa13.38□□□□□ -0.27
SEC13-206ENST00000397102 FAM180BQ6P0A1 224 aa13.38□□□□□ -0.27
SEC13-206ENST00000397102 DNAJC14Q6Y2X3 702 aaPredicted RBP13.38□□□□□ -0.27
SEC13-206ENST00000397102 GGNQ86UU5 652 aa13.38□□□□□ -0.27
SEC13-206ENST00000397102 STK32CQ86UX6 486 aa13.38□□□□□ -0.27
SEC13-206ENST00000397102 KLHL7Q8IXQ5 586 aa13.38□□□□□ -0.27
SEC13-206ENST00000397102 UHMK1Q8TAS1 419 aaKnown RBP13.38□□□□□ -0.27
SEC13-206ENST00000397102 KCTD4Q8WVF5 259 aa13.38□□□□□ -0.27
SEC13-206ENST00000397102 TM4SF18Q96CE8 201 aa13.38□□□□□ -0.27
SEC13-206ENST00000397102 C1GALT1C1Q96EU7 318 aa13.38□□□□□ -0.27
SEC13-206ENST00000397102 C11orf24Q96F05 449 aaPredicted RBP13.38□□□□□ -0.27
SEC13-206ENST00000397102 HS6ST2Q96MM7 605 aa13.38□□□□□ -0.27
SEC13-206ENST00000397102 NTMT1Q9BV86 223 aa13.38□□□□□ -0.27
SEC13-206ENST00000397102 C19orf24Q9BVV8 132 aa13.38□□□□□ -0.27
SEC13-206ENST00000397102 FAIM2Q9BWQ8 316 aa13.38□□□□□ -0.27
SEC13-206ENST00000397102 TRIM31Q9BZY9 425 aa13.38□□□□□ -0.27
SEC13-206ENST00000397102 ESRP2Q9H6T0 727 aaKnown RBP13.38□□□□□ -0.27
SEC13-206ENST00000397102 NOL11Q9H8H0 719 aaKnown RBP13.38□□□□□ -0.27
SEC13-206ENST00000397102 ANKRA2Q9H9E1 313 aa13.38□□□□□ -0.27
SEC13-206ENST00000397102 FOLH1BQ9HBA9 442 aa13.38□□□□□ -0.27
SEC13-206ENST00000397102 CLEC4AQ9UMR7 237 aa13.38□□□□□ -0.27
SEC13-206ENST00000397102 ABCG2Q9UNQ0 655 aa13.38□□□□□ -0.27
SEC13-206ENST00000397102 OR7A17O14581 309 aa13.37□□□□□ -0.27
SEC13-206ENST00000397102 FADS1O60427 444 aa13.37□□□□□ -0.27
SEC13-206ENST00000397102 NDUFS7O75251 213 aa13.37□□□□□ -0.27
SEC13-206ENST00000397102 NME6O75414 186 aaPredicted RBP13.37□□□□□ -0.27
SEC13-206ENST00000397102 SIX3O95343 332 aaPredicted RBP13.37□□□□□ -0.27
SEC13-206ENST00000397102 THBS2P35442 1172 aa13.37□□□□□ -0.27
SEC13-206ENST00000397102 EIF1AXP47813 144 aaKnown RBP13.37□□□□□ -0.27
SEC13-206ENST00000397102 ALDH9A1P49189 494 aa13.37□□□□□ -0.27
SEC13-206ENST00000397102 FAPQ12884 760 aa13.37□□□□□ -0.27
SEC13-206ENST00000397102 STX5Q13190 355 aa13.37□□□□□ -0.27
SEC13-206ENST00000397102 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.37□□□□□ -0.27
SEC13-206ENST00000397102 ZNF672Q499Z4 452 aaPredicted RBP13.37□□□□□ -0.27
SEC13-206ENST00000397102 ALKBH2Q6NS38 261 aa13.37□□□□□ -0.27
SEC13-206ENST00000397102 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.37□□□□□ -0.27
SEC13-206ENST00000397102 SLC44A2Q8IWA5 706 aaPredicted RBP13.37□□□□□ -0.27
SEC13-206ENST00000397102 LRRC8AQ8IWT6 810 aa13.37□□□□□ -0.27
SEC13-206ENST00000397102 CTAGE3PQ8IX95 158 aa13.37□□□□□ -0.27
SEC13-206ENST00000397102 CENPLQ8N0S6 344 aaPredicted RBP13.37□□□□□ -0.27
SEC13-206ENST00000397102 SLC35F6Q8N357 371 aa13.37□□□□□ -0.27
SEC13-206ENST00000397102 STEAP2Q8NFT2 490 aa13.37□□□□□ -0.27
SEC13-206ENST00000397102 OR4N2Q8NGD1 307 aa13.37□□□□□ -0.27
SEC13-206ENST00000397102 OR52B6Q8NGF0 335 aa13.37□□□□□ -0.27
SEC13-206ENST00000397102 NEUROG1Q92886 237 aa13.37□□□□□ -0.27
SEC13-206ENST00000397102 ATP6V1E2Q96A05 226 aa13.37□□□□□ -0.27
SEC13-206ENST00000397102 S100PBPQ96BU1 408 aa13.37□□□□□ -0.27
SEC13-206ENST00000397102 RHNO1Q9BSD3 238 aa13.37□□□□□ -0.27
SEC13-206ENST00000397102 BEX2Q9BXY8 128 aa13.37□□□□□ -0.27
SEC13-206ENST00000397102 NGBQ9NPG2 151 aa13.37□□□□□ -0.27
SEC13-206ENST00000397102 PFDN4Q9NQP4 134 aa13.37□□□□□ -0.27
SEC13-206ENST00000397102 GLRX2Q9NS18 164 aa13.37□□□□□ -0.27
SEC13-206ENST00000397102 PAQR5Q9NXK6 330 aaPredicted RBP13.37□□□□□ -0.27
SEC13-206ENST00000397102 STOML1Q9UBI4 398 aa13.37□□□□□ -0.27
SEC13-206ENST00000397102 LPAR3Q9UBY5 353 aa13.37□□□□□ -0.27
SEC13-206ENST00000397102 GDF2Q9UK05 429 aaPredicted RBP13.37□□□□□ -0.27
SEC13-206ENST00000397102 UTS2RQ9UKP6 389 aa13.37□□□□□ -0.27
SEC13-206ENST00000397102 OR10H1Q9Y4A9 318 aa13.37□□□□□ -0.27
SEC13-206ENST00000397102 SNX8Q9Y5X2 465 aa13.37□□□□□ -0.27
SEC13-206ENST00000397102 A0A096LNT2 108 aa13.36□□□□□ -0.27
SEC13-206ENST00000397102 EIF1AYO14602 144 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms