RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 LINC01387J3KSC0 135 aa12.71□□□□□ -0.37
SEC13-204ENST00000397099 SCAMP2O15127 329 aaKnown RBP12.71□□□□□ -0.37
SEC13-204ENST00000397099 EMC8O43402 210 aa12.71□□□□□ -0.37
SEC13-204ENST00000397099 AKAP10O43572 662 aa12.71□□□□□ -0.37
SEC13-204ENST00000397099 PEX11AO75192 247 aa12.71□□□□□ -0.37
SEC13-204ENST00000397099 EPPINO95925 133 aa12.71□□□□□ -0.37
SEC13-204ENST00000397099 KRT16P08779 473 aa12.71□□□□□ -0.37
SEC13-204ENST00000397099 DHRS4L1P0CG22 281 aa12.71□□□□□ -0.37
SEC13-204ENST00000397099 CPN1P15169 458 aa12.71□□□□□ -0.37
SEC13-204ENST00000397099 SSTR2P30874 369 aa12.71□□□□□ -0.37
SEC13-204ENST00000397099 EVI2BP34910 448 aa12.71□□□□□ -0.37
SEC13-204ENST00000397099 TIMP3P35625 211 aa12.71□□□□□ -0.37
SEC13-204ENST00000397099 PTGDSP41222 190 aa12.71□□□□□ -0.37
SEC13-204ENST00000397099 DSCR4P56555 118 aaPredicted RBP12.71□□□□□ -0.37
SEC13-204ENST00000397099 ABCE1P61221 599 aaKnown RBP12.71□□□□□ -0.37
SEC13-204ENST00000397099 RCAN2Q14206 197 aa12.71□□□□□ -0.37
SEC13-204ENST00000397099 CHI3L2Q15782 390 aa12.71□□□□□ -0.37
SEC13-204ENST00000397099 CPTPQ5TA50 214 aa12.71□□□□□ -0.37
SEC13-204ENST00000397099 BHLHB9Q6PI77 547 aa12.71□□□□□ -0.37
SEC13-204ENST00000397099 IFNEQ86WN2 208 aa12.71□□□□□ -0.37
SEC13-204ENST00000397099 WDSUB1Q8N9V3 476 aa12.71□□□□□ -0.37
SEC13-204ENST00000397099 GOT1L1Q8NHS2 421 aaPredicted RBP12.71□□□□□ -0.37
SEC13-204ENST00000397099 AGR3Q8TD06 166 aa12.71□□□□□ -0.37
SEC13-204ENST00000397099 HOXB13Q92826 284 aaPredicted RBP12.71□□□□□ -0.37
SEC13-204ENST00000397099 GFM2Q969S9 779 aaKnown RBP12.71□□□□□ -0.37
SEC13-204ENST00000397099 MS4A4EQ96PG1 132 aa12.71□□□□□ -0.37
SEC13-204ENST00000397099 TIMP4Q99727 224 aa12.71□□□□□ -0.37
SEC13-204ENST00000397099 ENKD1Q9H0I2 346 aa12.71□□□□□ -0.37
SEC13-204ENST00000397099 CALHM2Q9HA72 323 aa12.71□□□□□ -0.37
SEC13-204ENST00000397099 NEUROD4Q9HD90 331 aa12.71□□□□□ -0.37
SEC13-204ENST00000397099 KCNK9Q9NPC2 374 aa12.71□□□□□ -0.37
SEC13-204ENST00000397099 FAM120CQ9NX05 1096 aaKnown RBP12.71□□□□□ -0.37
SEC13-204ENST00000397099 GIN1Q9NXP7 522 aa12.71□□□□□ -0.37
SEC13-204ENST00000397099 ALKBH4Q9NXW9 302 aa12.71□□□□□ -0.37
SEC13-204ENST00000397099 ASIC5Q9NY37 505 aa12.71□□□□□ -0.37
SEC13-204ENST00000397099 NOP53Q9NZM5 478 aaKnown RBP12.71□□□□□ -0.37
SEC13-204ENST00000397099 HAO1Q9UJM8 370 aa12.71□□□□□ -0.37
SEC13-204ENST00000397099 IL2RAP01589 272 aa12.7□□□□□ -0.38
SEC13-204ENST00000397099 CHMP24386 653 aa12.7□□□□□ -0.38
SEC13-204ENST00000397099 PRIM2P49643 509 aa12.7□□□□□ -0.38
SEC13-204ENST00000397099 RPL14P50914 215 aaKnown RBP12.7□□□□□ -0.38
SEC13-204ENST00000397099 C21orf58P58505 322 aa12.7□□□□□ -0.38
SEC13-204ENST00000397099 EEF1A1P68104 462 aaKnown RBP12.7□□□□□ -0.38
SEC13-204ENST00000397099 EMX2Q04743 252 aa12.7□□□□□ -0.38
SEC13-204ENST00000397099 GAB1Q13480 694 aa12.7□□□□□ -0.38
SEC13-204ENST00000397099 PRSS53Q2L4Q9 553 aa12.7□□□□□ -0.38
SEC13-204ENST00000397099 EEF1A1P5Q5VTE0 462 aa12.7□□□□□ -0.38
SEC13-204ENST00000397099 RTL6Q6ICC9 239 aa12.7□□□□□ -0.38
SEC13-204ENST00000397099 ZNF551Q7Z340 670 aaPredicted RBP12.7□□□□□ -0.38
SEC13-204ENST00000397099 ACBD4Q8NC06 268 aa12.7□□□□□ -0.38
SEC13-204ENST00000397099 NUP43Q8NFH3 380 aa12.7□□□□□ -0.38
SEC13-204ENST00000397099 OR14L1PQ8NHC6 308 aa12.7□□□□□ -0.38
SEC13-204ENST00000397099 RAB3IL1Q8TBN0 382 aa12.7□□□□□ -0.38
SEC13-204ENST00000397099 ZPLD1Q8TCW7 415 aa12.7□□□□□ -0.38
SEC13-204ENST00000397099 OR5P2Q8WZ92 322 aa12.7□□□□□ -0.38
SEC13-204ENST00000397099 EFHD2Q96C19 240 aaPredicted RBP12.7□□□□□ -0.38
SEC13-204ENST00000397099 C14orf79Q96F83 325 aa12.7□□□□□ -0.38
SEC13-204ENST00000397099 ZFP3Q96NJ6 502 aa12.7□□□□□ -0.38
SEC13-204ENST00000397099 TREX2Q9BQ50 279 aaPredicted RBP12.7□□□□□ -0.38
SEC13-204ENST00000397099 UGT2B28Q9BY64 529 aa12.7□□□□□ -0.38
SEC13-204ENST00000397099 BHLHE41Q9C0J9 482 aaPredicted RBP12.7□□□□□ -0.38
SEC13-204ENST00000397099 PTGES2Q9H7Z7 377 aa12.7□□□□□ -0.38
SEC13-204ENST00000397099 GALNT9Q9HCQ5 603 aa12.7□□□□□ -0.38
SEC13-204ENST00000397099 SERHLQ9NQF3 203 aa12.7□□□□□ -0.38
SEC13-204ENST00000397099 TAS2R10Q9NYW0 307 aa12.7□□□□□ -0.38
SEC13-204ENST00000397099 PPP4R1LQ9P1A2 415 aa12.7□□□□□ -0.38
SEC13-204ENST00000397099 STOML1Q9UBI4 398 aa12.7□□□□□ -0.38
SEC13-204ENST00000397099 ZNF629Q9UEG4 869 aaPredicted RBP12.7□□□□□ -0.38
SEC13-204ENST00000397099 BAIAP2L1Q9UHR4 511 aa12.7□□□□□ -0.38
SEC13-204ENST00000397099 HCFC1P51610 2035 aa12.7□□□□□ -0.38
SEC13-204ENST00000397099 A0A1W2PRB8 838 aa12.69□□□□□ -0.38
SEC13-204ENST00000397099 CD8B2A6NJW9 211 aa12.69□□□□□ -0.38
SEC13-204ENST00000397099 DVL2O14641 736 aa12.69□□□□□ -0.38
SEC13-204ENST00000397099 SKAP2O75563 359 aaPredicted RBP12.69□□□□□ -0.38
SEC13-204ENST00000397099 NKX2-2O95096 273 aa12.69□□□□□ -0.38
SEC13-204ENST00000397099 NGFRP08138 427 aa12.69□□□□□ -0.38
SEC13-204ENST00000397099 CYP4B1P13584 511 aa12.69□□□□□ -0.38
SEC13-204ENST00000397099 BMP7P18075 431 aa12.69□□□□□ -0.38
SEC13-204ENST00000397099 GABRA3P34903 492 aa12.69□□□□□ -0.38
SEC13-204ENST00000397099 MAP3K8P41279 467 aa12.69□□□□□ -0.38
SEC13-204ENST00000397099 KIR3DL1P43629 444 aa12.69□□□□□ -0.38
SEC13-204ENST00000397099 SLC1A6P48664 564 aa12.69□□□□□ -0.38
SEC13-204ENST00000397099 C17orf67Q0P5P2 114 aa12.69□□□□□ -0.38
SEC13-204ENST00000397099 STX3Q13277 289 aa12.69□□□□□ -0.38
SEC13-204ENST00000397099 BCL2A1Q16548 175 aa12.69□□□□□ -0.38
SEC13-204ENST00000397099 GLYR1Q49A26 553 aaPredicted RBP12.69□□□□□ -0.38
SEC13-204ENST00000397099 ACSF3Q4G176 576 aaPredicted RBP12.69□□□□□ -0.38
SEC13-204ENST00000397099 HHATQ5VTY9 493 aa12.69□□□□□ -0.38
SEC13-204ENST00000397099 IL23RQ5VWK5 629 aa12.69□□□□□ -0.38
SEC13-204ENST00000397099 NSUN5P2Q63ZY6 315 aa12.69□□□□□ -0.38
SEC13-204ENST00000397099 CAMKMTQ7Z624 323 aa12.69□□□□□ -0.38
SEC13-204ENST00000397099 TRIM42Q8IWZ5 723 aa12.69□□□□□ -0.38
SEC13-204ENST00000397099 OR4K17Q8NGC6 315 aa12.69□□□□□ -0.38
SEC13-204ENST00000397099 PSMA8Q8TAA3 256 aa12.69□□□□□ -0.38
SEC13-204ENST00000397099 GPR151Q8TDV0 419 aa12.69□□□□□ -0.38
SEC13-204ENST00000397099 CIDECQ96AQ7 238 aaPredicted RBP12.69□□□□□ -0.38
SEC13-204ENST00000397099 COQ8BQ96D53 544 aa12.69□□□□□ -0.38
SEC13-204ENST00000397099 LURAP1Q96LR2 239 aa12.69□□□□□ -0.38
SEC13-204ENST00000397099 STACQ99469 402 aa12.69□□□□□ -0.38
SEC13-204ENST00000397099 G6PC3Q9BUM1 346 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms