RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 NRG4Q8WWG1 115 aa12.61□□□□□ -0.39
MCF2L-209ENST00000397036 HSPBAP1Q96EW2 488 aa12.61□□□□□ -0.39
MCF2L-209ENST00000397036 OTUB1Q96FW1 271 aaPredicted RBP12.61□□□□□ -0.39
MCF2L-209ENST00000397036 LCORQ96JN0 433 aaPredicted RBP12.61□□□□□ -0.39
MCF2L-209ENST00000397036 ZNF354BQ96LW1 612 aa12.61□□□□□ -0.39
MCF2L-209ENST00000397036 ZNF347Q96SE7 839 aa12.61□□□□□ -0.39
MCF2L-209ENST00000397036 RSPO3Q9BXY4 272 aaPredicted RBP12.61□□□□□ -0.39
MCF2L-209ENST00000397036 ITPAQ9BY32 194 aa12.61□□□□□ -0.39
MCF2L-209ENST00000397036 CBLCQ9ULV8 474 aa12.61□□□□□ -0.39
MCF2L-209ENST00000397036 ZNF232Q9UNY5 417 aa12.61□□□□□ -0.39
MCF2L-209ENST00000397036 FARSAQ9Y285 508 aaKnown RBP12.61□□□□□ -0.39
MCF2L-209ENST00000397036 DTX4Q9Y2E6 619 aa12.61□□□□□ -0.39
MCF2L-209ENST00000397036 PTRH2Q9Y3E5 179 aaKnown RBP12.61□□□□□ -0.39
MCF2L-209ENST00000397036 PCDHGA10Q9Y5H3 936 aa12.61□□□□□ -0.39
MCF2L-209ENST00000397036 GXYLT2A0PJZ3 443 aa12.6□□□□□ -0.39
MCF2L-209ENST00000397036 PMS2P1A4D2B8 440 aa12.6□□□□□ -0.39
MCF2L-209ENST00000397036 TERTO14746 1132 aaKnown RBP12.6□□□□□ -0.39
MCF2L-209ENST00000397036 TNFSF15O95150 251 aa12.6□□□□□ -0.39
MCF2L-209ENST00000397036 LGI1O95970 557 aa12.6□□□□□ -0.39
MCF2L-209ENST00000397036 ALPPP05187 535 aa12.6□□□□□ -0.39
MCF2L-209ENST00000397036 FABP3P05413 133 aa12.6□□□□□ -0.39
MCF2L-209ENST00000397036 DBIP07108 87 aaKnown RBP12.6□□□□□ -0.39
MCF2L-209ENST00000397036 PABPC4LP0CB38 370 aaKnown RBP12.6□□□□□ -0.39
MCF2L-209ENST00000397036 SDHBP21912 280 aa12.6□□□□□ -0.39
MCF2L-209ENST00000397036 PSMD4P55036 377 aaKnown RBP12.6□□□□□ -0.39
MCF2L-209ENST00000397036 SSPNQ14714 243 aa12.6□□□□□ -0.39
MCF2L-209ENST00000397036 PAPD4Q6PIY7 484 aaKnown RBP12.6□□□□□ -0.39
MCF2L-209ENST00000397036 SLC29A4Q7RTT9 530 aa12.6□□□□□ -0.39
MCF2L-209ENST00000397036 ZNF321PQ8N8H1 164 aa12.6□□□□□ -0.39
MCF2L-209ENST00000397036 NUBPLQ8TB37 319 aa12.6□□□□□ -0.39
MCF2L-209ENST00000397036 PIK3R3Q92569 461 aa12.6□□□□□ -0.39
MCF2L-209ENST00000397036 PROX1Q92786 737 aa12.6□□□□□ -0.39
MCF2L-209ENST00000397036 VMP1Q96GC9 406 aa12.6□□□□□ -0.39
MCF2L-209ENST00000397036 TPD52L3Q96J77 140 aa12.6□□□□□ -0.39
MCF2L-209ENST00000397036 ZNF700Q9H0M5 742 aa12.6□□□□□ -0.39
MCF2L-209ENST00000397036 FOXJ2Q9P0K8 574 aa12.6□□□□□ -0.39
MCF2L-209ENST00000397036 MRTO4Q9UKD2 239 aaKnown RBP12.6□□□□□ -0.39
MCF2L-209ENST00000397036 TCFL5Q9UL49 500 aa12.6□□□□□ -0.39
MCF2L-209ENST00000397036 V9GYQ6 96 aa12.6□□□□□ -0.39
MCF2L-209ENST00000397036 TEX51A0A1B0GUA7 166 aa12.59□□□□□ -0.39
MCF2L-209ENST00000397036 C2orf92A0A1B0GVN3 265 aa12.59□□□□□ -0.39
MCF2L-209ENST00000397036 CDRT15L2A8MXV6 281 aa12.59□□□□□ -0.39
MCF2L-209ENST00000397036 NPIPB9F8W1W9 429 aa12.59□□□□□ -0.39
MCF2L-209ENST00000397036 H0YJX3 145 aa12.59□□□□□ -0.39
MCF2L-209ENST00000397036 DXOO77932 396 aaKnown RBP12.59□□□□□ -0.39
MCF2L-209ENST00000397036 CST1P01037 141 aa12.59□□□□□ -0.39
MCF2L-209ENST00000397036 OPN1SWP03999 348 aa12.59□□□□□ -0.39
MCF2L-209ENST00000397036 ATXN8OSP0DMR3 200 aa12.59□□□□□ -0.39
MCF2L-209ENST00000397036 TCN2P20062 427 aa12.59□□□□□ -0.39
MCF2L-209ENST00000397036 FOLR3P41439 243 aa12.59□□□□□ -0.39
MCF2L-209ENST00000397036 SESN3P58005 492 aa12.59□□□□□ -0.39
MCF2L-209ENST00000397036 SLC26A5P58743 744 aa12.59□□□□□ -0.39
MCF2L-209ENST00000397036 RPS15P62841 145 aaKnown RBP12.59□□□□□ -0.39
MCF2L-209ENST00000397036 VLDLRP98155 873 aa12.59□□□□□ -0.39
MCF2L-209ENST00000397036 PUM1Q14671 1186 aaKnown RBP eCLIP12.59□□□□□ -0.39
MCF2L-209ENST00000397036 LARS2Q15031 903 aaKnown RBP12.59□□□□□ -0.39
MCF2L-209ENST00000397036 TRIP10Q15642 601 aa12.59□□□□□ -0.39
MCF2L-209ENST00000397036 ZNF141Q15928 474 aa12.59□□□□□ -0.39
MCF2L-209ENST00000397036 FAAH2Q6GMR7 532 aa12.59□□□□□ -0.39
MCF2L-209ENST00000397036 AMIGO2Q86SJ2 522 aa12.59□□□□□ -0.39
MCF2L-209ENST00000397036 C9orf40Q8IXQ3 194 aa12.59□□□□□ -0.39
MCF2L-209ENST00000397036 SMYD1Q8NB12 490 aa12.59□□□□□ -0.39
MCF2L-209ENST00000397036 OR5L2Q8NGL0 311 aa12.59□□□□□ -0.39
MCF2L-209ENST00000397036 OR52P1PQ8NH57 321 aa12.59□□□□□ -0.39
MCF2L-209ENST00000397036 CT55Q8WUE5 264 aa12.59□□□□□ -0.39
MCF2L-209ENST00000397036 SLC35B4Q969S0 331 aa12.59□□□□□ -0.39
MCF2L-209ENST00000397036 ZG16BQ96DA0 208 aa12.59□□□□□ -0.39
MCF2L-209ENST00000397036 RNF31Q96EP0 1072 aa12.59□□□□□ -0.39
MCF2L-209ENST00000397036 NRBF2Q96F24 287 aa12.59□□□□□ -0.39
MCF2L-209ENST00000397036 VPS50Q96JG6 964 aa12.59□□□□□ -0.39
MCF2L-209ENST00000397036 IMMP1LQ96LU5 166 aa12.59□□□□□ -0.39
MCF2L-209ENST00000397036 WWTR1Q9GZV5 400 aa12.59□□□□□ -0.39
MCF2L-209ENST00000397036 HOXD1Q9GZZ0 328 aa12.59□□□□□ -0.39
MCF2L-209ENST00000397036 NTN4Q9HB63 628 aa12.59□□□□□ -0.39
MCF2L-209ENST00000397036 CACYBPQ9HB71 228 aaKnown RBP12.59□□□□□ -0.39
MCF2L-209ENST00000397036 NDUFAF4Q9P032 175 aa12.59□□□□□ -0.39
MCF2L-209ENST00000397036 MKLN1Q9UL63 735 aa12.59□□□□□ -0.39
MCF2L-209ENST00000397036 PCDHGA6Q9Y5G7 932 aa12.59□□□□□ -0.39
MCF2L-209ENST00000397036 STMND1H3BQB6 276 aa12.58□□□□□ -0.4
MCF2L-209ENST00000397036 TPST1O60507 370 aa12.58□□□□□ -0.4
MCF2L-209ENST00000397036 IL33O95760 270 aa12.58□□□□□ -0.4
MCF2L-209ENST00000397036 RHCEP18577 417 aa12.58□□□□□ -0.4
MCF2L-209ENST00000397036 ATP6V1C1P21283 382 aa12.58□□□□□ -0.4
MCF2L-209ENST00000397036 STAT5AP42229 794 aa12.58□□□□□ -0.4
MCF2L-209ENST00000397036 HMGA2P52926 109 aa12.58□□□□□ -0.4
MCF2L-209ENST00000397036 FOXL2P58012 376 aa12.58□□□□□ -0.4
MCF2L-209ENST00000397036 RNF4P78317 190 aa12.58□□□□□ -0.4
MCF2L-209ENST00000397036 PCOLCEQ15113 449 aa12.58□□□□□ -0.4
MCF2L-209ENST00000397036 EXT1Q16394 746 aa12.58□□□□□ -0.4
MCF2L-209ENST00000397036 NRF1Q16656 503 aa12.58□□□□□ -0.4
MCF2L-209ENST00000397036 DECR1Q16698 335 aa12.58□□□□□ -0.4
MCF2L-209ENST00000397036 ZNF311Q5JNZ3 666 aa12.58□□□□□ -0.4
MCF2L-209ENST00000397036 RNF220Q5VTB9 566 aa12.58□□□□□ -0.4
MCF2L-209ENST00000397036 HLA-DQA1Q5Y7H0 255 aa12.58□□□□□ -0.4
MCF2L-209ENST00000397036 OR2T5Q6IEZ7 315 aa12.58□□□□□ -0.4
MCF2L-209ENST00000397036 HSDL2Q6YN16 418 aa12.58□□□□□ -0.4
MCF2L-209ENST00000397036 TSEN54Q7Z6J9 526 aaKnown RBP12.58□□□□□ -0.4
MCF2L-209ENST00000397036 PACS2Q86VP3 889 aa12.58□□□□□ -0.4
MCF2L-209ENST00000397036 SVOPLQ8N434 492 aa12.58□□□□□ -0.4
MCF2L-209ENST00000397036 PACRGLQ8N7B6 248 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms