RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 NECTIN4Q96NY8 510 aa12.49□□□□□ -0.41
TRIM40-207ENST00000396581 PINK1Q9BXM7 581 aa12.49□□□□□ -0.41
TRIM40-207ENST00000396581 ANKRD19PQ9H560 264 aa12.49□□□□□ -0.41
TRIM40-207ENST00000396581 CYSLTR2Q9NS75 346 aa12.49□□□□□ -0.41
TRIM40-207ENST00000396581 C5AR2Q9P296 337 aa12.49□□□□□ -0.41
TRIM40-207ENST00000396581 SLC23A1Q9UHI7 598 aa12.49□□□□□ -0.41
TRIM40-207ENST00000396581 ELF5Q9UKW6 265 aaPredicted RBP12.49□□□□□ -0.41
TRIM40-207ENST00000396581 SLC27A6Q9Y2P4 619 aa12.49□□□□□ -0.41
TRIM40-207ENST00000396581 LINC00862A6NCI5 91 aa12.49□□□□□ -0.41
TRIM40-207ENST00000396581 J3QRE1 110 aa12.49□□□□□ -0.41
TRIM40-207ENST00000396581 TPD52L2O43399 206 aaKnown RBP12.49□□□□□ -0.41
TRIM40-207ENST00000396581 CHP2O43745 196 aa12.49□□□□□ -0.41
TRIM40-207ENST00000396581 NCR1O76036 304 aa12.49□□□□□ -0.41
TRIM40-207ENST00000396581 NFATC1O95644 943 aa12.49□□□□□ -0.41
TRIM40-207ENST00000396581 ACP5P13686 325 aa12.49□□□□□ -0.41
TRIM40-207ENST00000396581 ELK1P19419 428 aa12.49□□□□□ -0.41
TRIM40-207ENST00000396581 MTNR1BP49286 362 aa12.49□□□□□ -0.41
TRIM40-207ENST00000396581 KHKP50053 298 aa12.49□□□□□ -0.41
TRIM40-207ENST00000396581 GPR176Q14439 515 aa12.49□□□□□ -0.41
TRIM40-207ENST00000396581 TMEM64Q6YI46 380 aa12.49□□□□□ -0.41
TRIM40-207ENST00000396581 SHFQ7M4L6 423 aa12.49□□□□□ -0.41
TRIM40-207ENST00000396581 LHFPL3Q86UP9 236 aa12.49□□□□□ -0.41
TRIM40-207ENST00000396581 NUDT13Q86X67 352 aa12.49□□□□□ -0.41
TRIM40-207ENST00000396581 ETFBKMTQ8IXQ9 262 aa12.49□□□□□ -0.41
TRIM40-207ENST00000396581 SLC37A3Q8NCC5 494 aa12.49□□□□□ -0.41
TRIM40-207ENST00000396581 OR5M3Q8NGP4 307 aa12.49□□□□□ -0.41
TRIM40-207ENST00000396581 OR2L2Q8NH16 312 aa12.49□□□□□ -0.41
TRIM40-207ENST00000396581 SUN3Q8TAQ9 357 aa12.49□□□□□ -0.41
TRIM40-207ENST00000396581 MYLIPQ8WY64 445 aa12.49□□□□□ -0.41
TRIM40-207ENST00000396581 RAD51AP1Q96B01 352 aa12.49□□□□□ -0.41
TRIM40-207ENST00000396581 OTULINQ96BN8 352 aa12.49□□□□□ -0.41
TRIM40-207ENST00000396581 ZNF514Q96K75 400 aaPredicted RBP12.49□□□□□ -0.41
TRIM40-207ENST00000396581 IL17FQ96PD4 163 aa12.49□□□□□ -0.41
TRIM40-207ENST00000396581 ARHGDIGQ99819 225 aa12.49□□□□□ -0.41
TRIM40-207ENST00000396581 TMED9Q9BVK6 235 aa12.49□□□□□ -0.41
TRIM40-207ENST00000396581 PITHD1Q9GZP4 211 aaPredicted RBP12.49□□□□□ -0.41
TRIM40-207ENST00000396581 OR52A5Q9H2C5 316 aa12.49□□□□□ -0.41
TRIM40-207ENST00000396581 GLIPR2Q9H4G4 154 aa12.49□□□□□ -0.41
TRIM40-207ENST00000396581 C2orf16Q68DN1 1984 aa12.48□□□□□ -0.41
TRIM40-207ENST00000396581 A0A0G2JPF8 293 aa12.48□□□□□ -0.41
TRIM40-207ENST00000396581 A0A1W2PQ72 361 aa12.48□□□□□ -0.41
TRIM40-207ENST00000396581 HNRNPCL2B2RXH8 293 aa12.48□□□□□ -0.41
TRIM40-207ENST00000396581 HNRNPCL3B7ZW38 293 aa12.48□□□□□ -0.41
TRIM40-207ENST00000396581 SMLR1H3BR10 107 aa12.48□□□□□ -0.41
TRIM40-207ENST00000396581 RFXAPO00287 272 aa12.48□□□□□ -0.41
TRIM40-207ENST00000396581 SURF4O15260 269 aa12.48□□□□□ -0.41
TRIM40-207ENST00000396581 RFPL3O75679 317 aa12.48□□□□□ -0.41
TRIM40-207ENST00000396581 HNRNPCL4P0DMR1 293 aa12.48□□□□□ -0.41
TRIM40-207ENST00000396581 CELP19835 753 aa12.48□□□□□ -0.41
TRIM40-207ENST00000396581 XPAP23025 273 aaPredicted RBP12.48□□□□□ -0.41
TRIM40-207ENST00000396581 KELP23276 732 aa12.48□□□□□ -0.41
TRIM40-207ENST00000396581 HTR1FP30939 366 aa12.48□□□□□ -0.41
TRIM40-207ENST00000396581 RFX3P48380 749 aa12.48□□□□□ -0.41
TRIM40-207ENST00000396581 REEP5Q00765 189 aa12.48□□□□□ -0.41
TRIM40-207ENST00000396581 MRPL28Q13084 256 aaKnown RBP12.48□□□□□ -0.41
TRIM40-207ENST00000396581 GRIN2CQ14957 1233 aa12.48□□□□□ -0.41
TRIM40-207ENST00000396581 ARHGAP19Q14CB8 494 aa12.48□□□□□ -0.41
TRIM40-207ENST00000396581 ZNF765Q7L2R6 523 aa12.48□□□□□ -0.41
TRIM40-207ENST00000396581 TRMT11Q7Z4G4 463 aaKnown RBP12.48□□□□□ -0.41
TRIM40-207ENST00000396581 UBE3DQ7Z6J8 389 aa12.48□□□□□ -0.41
TRIM40-207ENST00000396581 NR2C2APQ86WQ0 139 aa12.48□□□□□ -0.41
TRIM40-207ENST00000396581 LRRC28Q86X40 367 aaPredicted RBP12.48□□□□□ -0.41
TRIM40-207ENST00000396581 TRAPPC5Q8IUR0 188 aa12.48□□□□□ -0.41
TRIM40-207ENST00000396581 GJD3Q8N144 294 aa12.48□□□□□ -0.41
TRIM40-207ENST00000396581 OR4F15Q8NGB8 312 aa12.48□□□□□ -0.41
TRIM40-207ENST00000396581 DIO2Q92813 273 aa12.48□□□□□ -0.41
TRIM40-207ENST00000396581 KCTD12Q96CX2 325 aaKnown RBP12.48□□□□□ -0.41
TRIM40-207ENST00000396581 SCMH1Q96GD3 660 aa12.48□□□□□ -0.41
TRIM40-207ENST00000396581 AMDHD1Q96NU7 426 aa12.48□□□□□ -0.41
TRIM40-207ENST00000396581 AIF1LQ9BQI0 150 aa12.48□□□□□ -0.41
TRIM40-207ENST00000396581 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.48□□□□□ -0.41
TRIM40-207ENST00000396581 OR2AG1Q9H205 316 aa12.48□□□□□ -0.41
TRIM40-207ENST00000396581 IGFLR1Q9H665 355 aa12.48□□□□□ -0.41
TRIM40-207ENST00000396581 DDX31Q9H8H2 851 aaKnown RBP12.48□□□□□ -0.41
TRIM40-207ENST00000396581 KCNK12Q9HB15 430 aa12.48□□□□□ -0.41
TRIM40-207ENST00000396581 TEX10Q9NXF1 929 aaPredicted RBP12.48□□□□□ -0.41
TRIM40-207ENST00000396581 IL20Q9NYY1 176 aa12.48□□□□□ -0.41
TRIM40-207ENST00000396581 PTTG3PQ9NZH4 202 aa12.48□□□□□ -0.41
TRIM40-207ENST00000396581 EIF3KQ9UBQ5 218 aaKnown RBP12.48□□□□□ -0.41
TRIM40-207ENST00000396581 GPR34Q9UPC5 381 aa12.48□□□□□ -0.41
TRIM40-207ENST00000396581 RNF215Q9Y6U7 377 aa12.48□□□□□ -0.41
TRIM40-207ENST00000396581 KIAA1549LQ6ZVL6 1849 aa12.48□□□□□ -0.41
TRIM40-207ENST00000396581 NINQ8N4C6 2090 aa12.47□□□□□ -0.41
TRIM40-207ENST00000396581 FAM170BA6NMN3 283 aa12.47□□□□□ -0.41
TRIM40-207ENST00000396581 SPINT1O43278 529 aa12.47□□□□□ -0.41
TRIM40-207ENST00000396581 KLF4O43474 513 aa12.47□□□□□ -0.41
TRIM40-207ENST00000396581 IFNA8P32881 189 aa12.47□□□□□ -0.41
TRIM40-207ENST00000396581 BTCP35070 178 aa12.47□□□□□ -0.41
TRIM40-207ENST00000396581 INPP1P49441 399 aa12.47□□□□□ -0.41
TRIM40-207ENST00000396581 RNF144AP50876 292 aaPredicted RBP12.47□□□□□ -0.41
TRIM40-207ENST00000396581 ARFIP1P53367 373 aa12.47□□□□□ -0.41
TRIM40-207ENST00000396581 SHC2P98077 582 aa12.47□□□□□ -0.41
TRIM40-207ENST00000396581 GNA13Q14344 377 aa12.47□□□□□ -0.41
TRIM40-207ENST00000396581 TCEAL5Q5H9L2 206 aa12.47□□□□□ -0.41
TRIM40-207ENST00000396581 HBMQ6B0K9 141 aa12.47□□□□□ -0.41
TRIM40-207ENST00000396581 ZNF322Q6U7Q0 402 aaPredicted RBP12.47□□□□□ -0.41
TRIM40-207ENST00000396581 IDO2Q6ZQW0 420 aa12.47□□□□□ -0.41
TRIM40-207ENST00000396581 PARS2Q7L3T8 475 aaKnown RBP12.47□□□□□ -0.41
TRIM40-207ENST00000396581 AMIGO1Q86WK6 493 aa12.47□□□□□ -0.41
TRIM40-207ENST00000396581 C17orf64Q86WR6 236 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms