RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 VWA5B2Q8N398 1253 aa13.94□□□□□ -0.18
CBX3-202ENST00000396386 PIGXQ8TBF5 258 aa13.94□□□□□ -0.18
CBX3-202ENST00000396386 ADAMTS18Q8TE60 1221 aa13.94□□□□□ -0.18
CBX3-202ENST00000396386 CRELD1Q96HD1 420 aa13.94□□□□□ -0.18
CBX3-202ENST00000396386 NELL2Q99435 816 aa13.94□□□□□ -0.18
CBX3-202ENST00000396386 PRR14Q9BWN1 585 aa13.94□□□□□ -0.18
CBX3-202ENST00000396386 RBCK1Q9BYM8 510 aa13.94□□□□□ -0.18
CBX3-202ENST00000396386 HCN3Q9P1Z3 774 aa13.94□□□□□ -0.18
CBX3-202ENST00000396386 WNT16Q9UBV4 365 aa13.94□□□□□ -0.18
CBX3-202ENST00000396386 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.94□□□□□ -0.18
CBX3-202ENST00000396386 MRPS33Q9Y291 106 aaKnown RBP13.94□□□□□ -0.18
CBX3-202ENST00000396386 A0A0A6YYC8 382 aaPredicted RBP13.93□□□□□ -0.18
CBX3-202ENST00000396386 BLACEA4D250 179 aa13.93□□□□□ -0.18
CBX3-202ENST00000396386 I3L1I5 382 aaPredicted RBP13.93□□□□□ -0.18
CBX3-202ENST00000396386 ENTPD6O75354 484 aa13.93□□□□□ -0.18
CBX3-202ENST00000396386 DBIP07108 87 aaKnown RBP13.93□□□□□ -0.18
CBX3-202ENST00000396386 IL9P15248 144 aa13.93□□□□□ -0.18
CBX3-202ENST00000396386 GPR68Q15743 365 aa13.93□□□□□ -0.18
CBX3-202ENST00000396386 ZNF367Q7RTV3 350 aa13.93□□□□□ -0.18
CBX3-202ENST00000396386 RANBP3LQ86VV4 465 aaPredicted RBP13.93□□□□□ -0.18
CBX3-202ENST00000396386 C17orf82Q86X59 251 aaPredicted RBP13.93□□□□□ -0.18
CBX3-202ENST00000396386 SIX5Q8N196 739 aa13.93□□□□□ -0.18
CBX3-202ENST00000396386 SPEM1Q8N4L4 309 aa13.93□□□□□ -0.18
CBX3-202ENST00000396386 IQCF1Q8N6M8 205 aa13.93□□□□□ -0.18
CBX3-202ENST00000396386 OR8J1Q8NGP2 316 aa13.93□□□□□ -0.18
CBX3-202ENST00000396386 TEX47Q8TBZ9 253 aa13.93□□□□□ -0.18
CBX3-202ENST00000396386 GPR151Q8TDV0 419 aa13.93□□□□□ -0.18
CBX3-202ENST00000396386 CTHRC1Q96CG8 243 aa13.93□□□□□ -0.18
CBX3-202ENST00000396386 SAP130Q9H0E3 1048 aa13.93□□□□□ -0.18
CBX3-202ENST00000396386 SLC25A19Q9HC21 320 aa13.93□□□□□ -0.18
CBX3-202ENST00000396386 DNAJC27Q9NZQ0 273 aa13.93□□□□□ -0.18
CBX3-202ENST00000396386 EML5Q05BV3 1969 aa13.93□□□□□ -0.18
CBX3-202ENST00000396386 TLCD2A6NGC4 264 aa13.93□□□□□ -0.18
CBX3-202ENST00000396386 LMO7DNF2Z398 122 aa13.93□□□□□ -0.18
CBX3-202ENST00000396386 CNOT3O75175 753 aaKnown RBP13.93□□□□□ -0.18
CBX3-202ENST00000396386 SLC15A1P46059 708 aa13.93□□□□□ -0.18
CBX3-202ENST00000396386 SMSP52788 366 aa13.93□□□□□ -0.18
CBX3-202ENST00000396386 POU6F2P78424 691 aaPredicted RBP13.93□□□□□ -0.18
CBX3-202ENST00000396386 OCA2Q04671 838 aa13.93□□□□□ -0.18
CBX3-202ENST00000396386 TSPAN31Q12999 210 aa13.93□□□□□ -0.18
CBX3-202ENST00000396386 DECR1Q16698 335 aa13.93□□□□□ -0.18
CBX3-202ENST00000396386 DEFB133Q30KQ1 61 aa13.93□□□□□ -0.18
CBX3-202ENST00000396386 MEDAGQ5VYS4 303 aa13.93□□□□□ -0.18
CBX3-202ENST00000396386 SDR16C5Q8N3Y7 309 aa13.93□□□□□ -0.18
CBX3-202ENST00000396386 TOR1AIP2Q8NFQ8 470 aa13.93□□□□□ -0.18
CBX3-202ENST00000396386 OR6C4Q8NGE1 309 aa13.93□□□□□ -0.18
CBX3-202ENST00000396386 ACOT11Q8WXI4 607 aaPredicted RBP13.93□□□□□ -0.18
CBX3-202ENST00000396386 PIK3R3Q92569 461 aa13.93□□□□□ -0.18
CBX3-202ENST00000396386 SLC41A3Q96GZ6 507 aa13.93□□□□□ -0.18
CBX3-202ENST00000396386 GPA33Q99795 319 aa13.93□□□□□ -0.18
CBX3-202ENST00000396386 CDCA4Q9BXL8 241 aa13.93□□□□□ -0.18
CBX3-202ENST00000396386 POLDIP3Q9BY77 421 aaKnown RBP13.93□□□□□ -0.18
CBX3-202ENST00000396386 POLR2J2Q9GZM3 115 aaKnown RBP13.93□□□□□ -0.18
CBX3-202ENST00000396386 POLE3Q9NRF9 147 aa13.93□□□□□ -0.18
CBX3-202ENST00000396386 SOHLH2Q9NX45 425 aa13.93□□□□□ -0.18
CBX3-202ENST00000396386 PLCL2Q9UPR0 1127 aa13.93□□□□□ -0.18
CBX3-202ENST00000396386 M0R082 166 aa13.92□□□□□ -0.18
CBX3-202ENST00000396386 M0R3G1 203 aa13.92□□□□□ -0.18
CBX3-202ENST00000396386 FOXD2O60548 495 aaPredicted RBP13.92□□□□□ -0.18
CBX3-202ENST00000396386 MED26O95402 600 aa13.92□□□□□ -0.18
CBX3-202ENST00000396386 NSA2O95478 260 aaKnown RBP13.92□□□□□ -0.18
CBX3-202ENST00000396386 CBX7O95931 251 aa13.92□□□□□ -0.18
CBX3-202ENST00000396386 PTHP01270 115 aa13.92□□□□□ -0.18
CBX3-202ENST00000396386 LIPAP38571 399 aa13.92□□□□□ -0.18
CBX3-202ENST00000396386 MAP3K8P41279 467 aa13.92□□□□□ -0.18
CBX3-202ENST00000396386 PCYT1AP49585 367 aa13.92□□□□□ -0.18
CBX3-202ENST00000396386 LSM11P83369 360 aaKnown RBP eCLIP13.92□□□□□ -0.18
CBX3-202ENST00000396386 HOXC5Q00444 222 aa13.92□□□□□ -0.18
CBX3-202ENST00000396386 GINS1Q14691 196 aa13.92□□□□□ -0.18
CBX3-202ENST00000396386 MOGQ16653 247 aa13.92□□□□□ -0.18
CBX3-202ENST00000396386 C14orf28Q4W4Y0 310 aa13.92□□□□□ -0.18
CBX3-202ENST00000396386 MFSD4BQ5TF39 518 aa13.92□□□□□ -0.18
CBX3-202ENST00000396386 PLAG1Q6DJT9 500 aa13.92□□□□□ -0.18
CBX3-202ENST00000396386 SLC36A4Q6YBV0 504 aa13.92□□□□□ -0.18
CBX3-202ENST00000396386 RRM2BQ7LG56 351 aa13.92□□□□□ -0.18
CBX3-202ENST00000396386 GDF7Q7Z4P5 450 aa13.92□□□□□ -0.18
CBX3-202ENST00000396386 CROCCP3Q8IVE0 287 aa13.92□□□□□ -0.18
CBX3-202ENST00000396386 GALNT12Q8IXK2 581 aa13.92□□□□□ -0.18
CBX3-202ENST00000396386 ZNF595Q8IYB9 648 aa13.92□□□□□ -0.18
CBX3-202ENST00000396386 CAMKK1Q8N5S9 505 aa13.92□□□□□ -0.18
CBX3-202ENST00000396386 TCEANCQ8N8B7 351 aa13.92□□□□□ -0.18
CBX3-202ENST00000396386 NDNFQ8TB73 568 aa13.92□□□□□ -0.18
CBX3-202ENST00000396386 ZNF285Q96NJ3 590 aa13.92□□□□□ -0.18
CBX3-202ENST00000396386 IRAK4Q9NWZ3 460 aa13.92□□□□□ -0.18
CBX3-202ENST00000396386 NTNG1Q9Y2I2 539 aa13.92□□□□□ -0.18
CBX3-202ENST00000396386 CENPVL1A0A0U1RR11 272 aa13.91□□□□□ -0.18
CBX3-202ENST00000396386 A0A1B0GVG6 124 aa13.91□□□□□ -0.18
CBX3-202ENST00000396386 FOXS1O43638 330 aa13.91□□□□□ -0.18
CBX3-202ENST00000396386 NKX2-2O95096 273 aa13.91□□□□□ -0.18
CBX3-202ENST00000396386 NID1P14543 1247 aa13.91□□□□□ -0.18
CBX3-202ENST00000396386 EPHA4P54764 986 aa13.91□□□□□ -0.18
CBX3-202ENST00000396386 EMP3P54852 163 aa13.91□□□□□ -0.18
CBX3-202ENST00000396386 GFERP55789 205 aa13.91□□□□□ -0.18
CBX3-202ENST00000396386 VBP1P61758 197 aa13.91□□□□□ -0.18
CBX3-202ENST00000396386 LSM3P62310 102 aaKnown RBP13.91□□□□□ -0.18
CBX3-202ENST00000396386 CDK5Q00535 292 aa13.91□□□□□ -0.18
CBX3-202ENST00000396386 ZNF91Q05481 1191 aa13.91□□□□□ -0.18
CBX3-202ENST00000396386 MAP4K2Q12851 820 aa13.91□□□□□ -0.18
CBX3-202ENST00000396386 SLC13A2Q13183 592 aa13.91□□□□□ -0.18
CBX3-202ENST00000396386 FAM53BQ14153 422 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms