RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 POU6F2P78424 691 aaPredicted RBP14.87□□□□□ -0.03
SMARCD1-202ENST00000394963 TAB1Q15750 504 aa14.87□□□□□ -0.03
SMARCD1-202ENST00000394963 OR2G6Q5TZ20 316 aa14.87□□□□□ -0.03
SMARCD1-202ENST00000394963 OTPQ5XKR4 325 aa14.87□□□□□ -0.03
SMARCD1-202ENST00000394963 ARHGAP22Q7Z5H3 698 aa14.87□□□□□ -0.03
SMARCD1-202ENST00000394963 CCDC103Q8IW40 242 aa14.87□□□□□ -0.03
SMARCD1-202ENST00000394963 AMER2Q8N7J2 671 aa14.87□□□□□ -0.03
SMARCD1-202ENST00000394963 GGHQ92820 318 aa14.87□□□□□ -0.03
SMARCD1-202ENST00000394963 SERHL2Q9H4I8 314 aa14.87□□□□□ -0.03
SMARCD1-202ENST00000394963 ATP13A2Q9NQ11 1180 aa14.87□□□□□ -0.03
SMARCD1-202ENST00000394963 SLC2A4RGQ9NR83 387 aa14.87□□□□□ -0.03
SMARCD1-202ENST00000394963 PCDHGA10Q9Y5H3 936 aa14.87□□□□□ -0.03
SMARCD1-202ENST00000394963 A0A0A6YYD5 115 aa14.87□□□□□ -0.03
SMARCD1-202ENST00000394963 SPTY2D1-AS1A0A0U1RR47 76 aa14.87□□□□□ -0.03
SMARCD1-202ENST00000394963 C7P10643 843 aa14.87□□□□□ -0.03
SMARCD1-202ENST00000394963 ELAVL4P26378 380 aaKnown RBP14.87□□□□□ -0.03
SMARCD1-202ENST00000394963 BMXP51813 675 aa14.87□□□□□ -0.03
SMARCD1-202ENST00000394963 MVDP53602 400 aa14.87□□□□□ -0.03
SMARCD1-202ENST00000394963 TNFRSF17Q02223 184 aa14.87□□□□□ -0.03
SMARCD1-202ENST00000394963 NSDHLQ15738 373 aa14.87□□□□□ -0.03
SMARCD1-202ENST00000394963 PUS10Q3MIT2 529 aaKnown RBP14.87□□□□□ -0.03
SMARCD1-202ENST00000394963 BBS10Q8TAM1 723 aa14.87□□□□□ -0.03
SMARCD1-202ENST00000394963 SERINC2Q96SA4 455 aa14.87□□□□□ -0.03
SMARCD1-202ENST00000394963 MGLLQ99685 303 aa14.87□□□□□ -0.03
SMARCD1-202ENST00000394963 SPRTNQ9H040 489 aaPredicted RBP14.87□□□□□ -0.03
SMARCD1-202ENST00000394963 A0A1W2PPC4 97 aa14.87□□□□□ -0.03
SMARCD1-202ENST00000394963 C2orf72A6NCS6 295 aa14.87□□□□□ -0.03
SMARCD1-202ENST00000394963 LRRN3E7EW58 273 aa14.87□□□□□ -0.03
SMARCD1-202ENST00000394963 CRYBA2P53672 197 aa14.87□□□□□ -0.03
SMARCD1-202ENST00000394963 ZNF791Q3KP31 576 aaPredicted RBP14.87□□□□□ -0.03
SMARCD1-202ENST00000394963 SAXO2Q658L1 398 aa14.87□□□□□ -0.03
SMARCD1-202ENST00000394963 EPYCQ99645 322 aa14.87□□□□□ -0.03
SMARCD1-202ENST00000394963 LRRN3Q9H3W5 708 aa14.87□□□□□ -0.03
SMARCD1-202ENST00000394963 ACSS1Q9NUB1 689 aaPredicted RBP14.87□□□□□ -0.03
SMARCD1-202ENST00000394963 GALNT8Q9NY28 637 aa14.87□□□□□ -0.03
SMARCD1-202ENST00000394963 WSB2Q9NYS7 404 aaPredicted RBP14.87□□□□□ -0.03
SMARCD1-202ENST00000394963 PRAMEF25A6NGN4 478 aa14.86□□□□□ -0.03
SMARCD1-202ENST00000394963 STX11O75558 287 aa14.86□□□□□ -0.03
SMARCD1-202ENST00000394963 MMP11P24347 488 aa14.86□□□□□ -0.03
SMARCD1-202ENST00000394963 GGT2P36268 569 aa14.86□□□□□ -0.03
SMARCD1-202ENST00000394963 CXCL12P48061 93 aa14.86□□□□□ -0.03
SMARCD1-202ENST00000394963 KCNJ5P48544 419 aa14.86□□□□□ -0.03
SMARCD1-202ENST00000394963 HNRNPKP61978 463 aaKnown RBP eCLIP14.86□□□□□ -0.031e-8■■■■□ 21.7
SMARCD1-202ENST00000394963 EIF2B5Q13144 721 aaKnown RBP14.86□□□□□ -0.03
SMARCD1-202ENST00000394963 TOMM20Q15388 145 aa14.86□□□□□ -0.03
SMARCD1-202ENST00000394963 PROX2Q3B8N5 592 aa14.86□□□□□ -0.03
SMARCD1-202ENST00000394963 CRTC2Q53ET0 693 aaPredicted RBP14.86□□□□□ -0.03
SMARCD1-202ENST00000394963 VWA2Q5GFL6 755 aa14.86□□□□□ -0.03
SMARCD1-202ENST00000394963 MRPL2Q5T653 305 aaKnown RBP14.86□□□□□ -0.03
SMARCD1-202ENST00000394963 SLC15A4Q8N697 577 aa14.86□□□□□ -0.03
SMARCD1-202ENST00000394963 TMEM52Q8NDY8 209 aa14.86□□□□□ -0.03
SMARCD1-202ENST00000394963 ZNF717Q9BY31 904 aaPredicted RBP14.86□□□□□ -0.03
SMARCD1-202ENST00000394963 ITPAQ9BY32 194 aa14.86□□□□□ -0.03
SMARCD1-202ENST00000394963 PTGFRNQ9P2B2 879 aa14.86□□□□□ -0.03
SMARCD1-202ENST00000394963 MKL2Q9ULH7 1088 aa14.86□□□□□ -0.03
SMARCD1-202ENST00000394963 ZC3H12DA2A288 527 aaKnown RBP14.86□□□□□ -0.03
SMARCD1-202ENST00000394963 AQP9O43315 295 aa14.86□□□□□ -0.03
SMARCD1-202ENST00000394963 SCO2O43819 266 aa14.86□□□□□ -0.03
SMARCD1-202ENST00000394963 CCDC159P0C7I6 412 aa14.86□□□□□ -0.03
SMARCD1-202ENST00000394963 RNH1P13489 461 aaKnown RBP14.86□□□□□ -0.03
SMARCD1-202ENST00000394963 GSTM2P28161 218 aa14.86□□□□□ -0.03
SMARCD1-202ENST00000394963 CDH11P55287 796 aa14.86□□□□□ -0.03
SMARCD1-202ENST00000394963 CRYZQ08257 329 aaKnown RBP14.86□□□□□ -0.03
SMARCD1-202ENST00000394963 ZIC1Q15915 447 aa14.86□□□□□ -0.03
SMARCD1-202ENST00000394963 PAQR7Q86WK9 346 aa14.86□□□□□ -0.03
SMARCD1-202ENST00000394963 CALML5Q9NZT1 146 aa14.86□□□□□ -0.03
SMARCD1-202ENST00000394963 PADI2Q9Y2J8 665 aa14.86□□□□□ -0.03
SMARCD1-202ENST00000394963 HRKO00198 91 aa14.86□□□□□ -0.03
SMARCD1-202ENST00000394963 TFECO14948 347 aaPredicted RBP14.86□□□□□ -0.03
SMARCD1-202ENST00000394963 CLPXO76031 633 aa14.86□□□□□ -0.03
SMARCD1-202ENST00000394963 IGHV4-34P06331 123 aa14.86□□□□□ -0.03
SMARCD1-202ENST00000394963 ALDH3B2P48448 385 aa14.86□□□□□ -0.03
SMARCD1-202ENST00000394963 YPEL5P62699 121 aa14.86□□□□□ -0.03
SMARCD1-202ENST00000394963 TRAM2Q15035 370 aa14.86□□□□□ -0.03
SMARCD1-202ENST00000394963 POC5Q8NA72 575 aa14.86□□□□□ -0.03
SMARCD1-202ENST00000394963 NDC1Q9BTX1 674 aa14.86□□□□□ -0.03
SMARCD1-202ENST00000394963 TMEM38AQ9H6F2 299 aa14.86□□□□□ -0.03
SMARCD1-202ENST00000394963 PLGRKTQ9HBL7 147 aa14.86□□□□□ -0.03
SMARCD1-202ENST00000394963 ACOT13Q9NPJ3 140 aa14.86□□□□□ -0.03
SMARCD1-202ENST00000394963 CENPVL1A0A0U1RR11 272 aa14.85□□□□□ -0.03
SMARCD1-202ENST00000394963 HYKKA2RU49 373 aa14.85□□□□□ -0.03
SMARCD1-202ENST00000394963 KLHL33A6NCF5 533 aa14.85□□□□□ -0.03
SMARCD1-202ENST00000394963 CLCA1A8K7I4 914 aa14.85□□□□□ -0.03
SMARCD1-202ENST00000394963 GPR75O95800 540 aa14.85□□□□□ -0.03
SMARCD1-202ENST00000394963 SRFP11831 508 aa14.85□□□□□ -0.03
SMARCD1-202ENST00000394963 CELP19835 753 aa14.85□□□□□ -0.03
SMARCD1-202ENST00000394963 SOX6P35712 828 aa14.85□□□□□ -0.03
SMARCD1-202ENST00000394963 DCST2Q5T1A1 773 aa14.85□□□□□ -0.03
SMARCD1-202ENST00000394963 PLBD1Q6P4A8 553 aa14.85□□□□□ -0.03
SMARCD1-202ENST00000394963 SPATC1Q76KD6 591 aa14.85□□□□□ -0.03
SMARCD1-202ENST00000394963 PRICKLE2Q7Z3G6 844 aa14.85□□□□□ -0.03
SMARCD1-202ENST00000394963 KLHL6Q8WZ60 621 aa14.85□□□□□ -0.03
SMARCD1-202ENST00000394963 SLC41A3Q96GZ6 507 aa14.85□□□□□ -0.03
SMARCD1-202ENST00000394963 FOXN4Q96NZ1 517 aa14.85□□□□□ -0.03
SMARCD1-202ENST00000394963 MS4A4EQ96PG1 132 aa14.85□□□□□ -0.03
SMARCD1-202ENST00000394963 OR2A5Q96R48 311 aa14.85□□□□□ -0.03
SMARCD1-202ENST00000394963 ADOQ96SZ5 270 aa14.85□□□□□ -0.03
SMARCD1-202ENST00000394963 AICDAQ9GZX7 198 aa14.85□□□□□ -0.03
SMARCD1-202ENST00000394963 SEMA4GQ9NTN9 838 aa14.85□□□□□ -0.03
SMARCD1-202ENST00000394963 POT1Q9NUX5 634 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms