RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 NCKAP1Q9Y2A7 1128 aa9.42□□□□□ -0.9
UBE2D3-208ENST00000394803 YARS2Q9Y2Z4 477 aaKnown RBP9.42□□□□□ -0.9
UBE2D3-208ENST00000394803 BOLA1Q9Y3E2 137 aa9.42□□□□□ -0.9
UBE2D3-208ENST00000394803 ZNF780BQ9Y6R6 833 aa9.42□□□□□ -0.9
UBE2D3-208ENST00000394803 LTBP2Q14767 1821 aa9.42□□□□□ -0.9
UBE2D3-208ENST00000394803 PRAMEF27A3QJZ7 478 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 LRIT2A6NDA9 550 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 WASHC1A8K0Z3 465 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 RNF13O43567 381 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 ITGA10O75578 1167 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 RFPL3O75679 317 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 HMGN2P05204 90 aaKnown RBP9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 ADH5P11766 374 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 SSTR4P31391 388 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 AHRP35869 848 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 CSNK1G2P78368 415 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 CSTF1Q05048 431 aaKnown RBP9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 LASP1Q14847 261 aaKnown RBP9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 HNRNPA1L2Q32P51 320 aaKnown RBP9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 CCDC58Q4VC31 144 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 FNDC3BQ53EP0 1204 aaKnown RBP9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 C9orf64Q5T6V5 341 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 SDE2Q6IQ49 451 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 PYHIN1Q6K0P9 492 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 FAM180BQ6P0A1 224 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 TRILQ7L0X0 811 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 CCDC28AQ8IWP9 274 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 UBE2J2Q8N2K1 259 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 NLGN4YQ8NFZ3 816 aaPredicted RBP9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 SPRYD4Q8WW59 207 aaPredicted RBP9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 BEX2Q9BXY8 128 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 MKRN2Q9H000 416 aaKnown RBP9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 MED28Q9H204 178 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 DPAGT1Q9H3H5 408 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 EMC7Q9NPA0 242 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 CYSLTR2Q9NS75 346 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 MCUBQ9NWR8 336 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 C5AR2Q9P296 337 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 GPR52Q9Y2T5 361 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 FEZF1A0PJY2 475 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 K7ESM1 405 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 GTPBP1O00178 669 aaKnown RBP9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 SPINT1O43278 529 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 KCNJ13O60928 360 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 STX11O75558 287 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 ERAL1O75616 437 aaKnown RBP9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 NFATC1O95644 943 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 SERPIND1P05546 499 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 CHRM5P08912 532 aaPredicted RBP9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 ALPPL2P10696 532 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 GNSP15586 552 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 M6PRP20645 277 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 STOMP27105 288 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 SLC6A1P30531 599 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 TRIM23P36406 574 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 CCR2P41597 374 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 AVPR1BP47901 424 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 PITPNBP48739 271 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 P2RX3P56373 397 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 PRDX1Q06830 199 aaKnown RBP9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 ZNF155Q12901 538 aaPredicted RBP9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 DHCR24Q15392 516 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 KIAA1161Q6NSJ0 714 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 WASH2PQ6VEQ5 465 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 ZNF620Q6ZNG0 422 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 UTS2BQ765I0 119 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 CXXC5Q7LFL8 322 aaKnown RBP9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 UBE3DQ7Z6J8 389 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 RANBP3LQ86VV4 465 aaPredicted RBP9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 RNF113BQ8IZP6 322 aaKnown RBP9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 CADM2Q8N3J6 435 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 C2orf73Q8N5S3 287 aaPredicted RBP9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 OR2L5Q8NG80 312 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 OR8D4Q8NGM9 314 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 SUN5Q8TC36 379 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 SNAPC3Q92966 411 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 ARRDC3Q96B67 414 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 UPRTQ96BW1 309 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 OR7D2Q96RA2 312 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 GPA33Q99795 319 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 C17orf62Q9BQA9 187 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 HDHD5Q9BXW7 423 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 ACTRT3Q9BYD9 372 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 SLC28A3Q9HAS3 691 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 BABAM2Q9NXR7 383 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 TEKT2Q9UIF3 430 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 NUBP2Q9Y5Y2 271 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 WNT6Q9Y6F9 365 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 CLCA3PQ9Y6N3 262 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 NINQ8N4C6 2090 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 MYOFQ9NZM1 2061 aa9.41□□□□□ -0.9
UBE2D3-208ENST00000394803 FAM86C2PA6NEL3 165 aa9.4□□□□□ -0.9
UBE2D3-208ENST00000394803 CPSF4LA6NMK7 179 aaKnown RBP9.4□□□□□ -0.9
UBE2D3-208ENST00000394803 CRYZL1O95825 349 aa9.4□□□□□ -0.9
UBE2D3-208ENST00000394803 SERPINA3P01011 423 aa9.4□□□□□ -0.9
UBE2D3-208ENST00000394803 MT-ND5P03915 603 aa9.4□□□□□ -0.9
UBE2D3-208ENST00000394803 CISD3P0C7P0 127 aa9.4□□□□□ -0.9
UBE2D3-208ENST00000394803 HIST1H1TP22492 207 aaPredicted RBP9.4□□□□□ -0.9
UBE2D3-208ENST00000394803 RAB28P51157 221 aa9.4□□□□□ -0.9
UBE2D3-208ENST00000394803 RAG2P55895 527 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms