RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 TTC23Q5W5X9 447 aa8.02□□□□□ -1.12
TDP1-203ENST00000393454 KDM4DQ6B0I6 523 aa8.02□□□□□ -1.12
TDP1-203ENST00000393454 DHRS4L2Q6PKH6 230 aa8.02□□□□□ -1.12
TDP1-203ENST00000393454 ZNF836Q6ZNA1 936 aa8.02□□□□□ -1.12
TDP1-203ENST00000393454 DBX2Q6ZNG2 339 aa8.02□□□□□ -1.12
TDP1-203ENST00000393454 COX15Q7KZN9 410 aa8.02□□□□□ -1.12
TDP1-203ENST00000393454 ZNF605Q86T29 641 aa8.02□□□□□ -1.12
TDP1-203ENST00000393454 CLIP4Q8N3C7 705 aa8.02□□□□□ -1.12
TDP1-203ENST00000393454 SLC5A8Q8N695 610 aa8.02□□□□□ -1.12
TDP1-203ENST00000393454 OR7G1Q8NGA0 311 aa8.02□□□□□ -1.12
TDP1-203ENST00000393454 OR4N2Q8NGD1 307 aa8.02□□□□□ -1.12
TDP1-203ENST00000393454 OR4C15Q8NGM1 316 aa8.02□□□□□ -1.12
TDP1-203ENST00000393454 OR6T1Q8NGN1 323 aa8.02□□□□□ -1.12
TDP1-203ENST00000393454 STT3BQ8TCJ2 826 aa8.02□□□□□ -1.12
TDP1-203ENST00000393454 VSTM2LQ96N03 204 aa8.02□□□□□ -1.12
TDP1-203ENST00000393454 ALPK1Q96QP1 1244 aa8.02□□□□□ -1.12
TDP1-203ENST00000393454 FEVQ99581 238 aa8.02□□□□□ -1.12
TDP1-203ENST00000393454 FNDC11Q9BVV2 318 aa8.02□□□□□ -1.12
TDP1-203ENST00000393454 PRR14Q9BWN1 585 aa8.02□□□□□ -1.12
TDP1-203ENST00000393454 VN1R1Q9GZP7 353 aa8.02□□□□□ -1.12
TDP1-203ENST00000393454 ZNF350Q9GZX5 532 aa8.02□□□□□ -1.12
TDP1-203ENST00000393454 NMNAT1Q9HAN9 279 aaPredicted RBP8.02□□□□□ -1.12
TDP1-203ENST00000393454 Q9N2J8 555 aa8.02□□□□□ -1.12
TDP1-203ENST00000393454 CTPS2Q9NRF8 586 aa8.02□□□□□ -1.12
TDP1-203ENST00000393454 RLIMQ9NVW2 624 aa8.02□□□□□ -1.12
TDP1-203ENST00000393454 PRODH2Q9UF12 536 aa8.02□□□□□ -1.12
TDP1-203ENST00000393454 GPR55Q9Y2T6 319 aaPredicted RBP8.02□□□□□ -1.12
TDP1-203ENST00000393454 IGKV3D-11A0A0A0MRZ8 115 aa8.02□□□□□ -1.13
TDP1-203ENST00000393454 LOC100130705A0A1B0GUX0 176 aa8.02□□□□□ -1.13
TDP1-203ENST00000393454 TCRBV16S1A1N1A0A5B0 115 aa8.02□□□□□ -1.13
TDP1-203ENST00000393454 AGAP5A6NIR3 686 aa8.02□□□□□ -1.13
TDP1-203ENST00000393454 CLDN24A6NM45 220 aa8.02□□□□□ -1.13
TDP1-203ENST00000393454 PEX12O00623 359 aa8.02□□□□□ -1.13
TDP1-203ENST00000393454 GDF9O60383 454 aa8.02□□□□□ -1.13
TDP1-203ENST00000393454 UGT2B17O75795 530 aa8.02□□□□□ -1.13
TDP1-203ENST00000393454 TNFAIP8O95379 198 aa8.02□□□□□ -1.13
TDP1-203ENST00000393454 DBIP07108 87 aaKnown RBP8.02□□□□□ -1.13
TDP1-203ENST00000393454 HEXBP07686 556 aa8.02□□□□□ -1.13
TDP1-203ENST00000393454 ZGLP1P0C6A0 271 aa8.02□□□□□ -1.13
TDP1-203ENST00000393454 CCNYL3P0C7X3 344 aa8.02□□□□□ -1.13
TDP1-203ENST00000393454 ZNF806P0C7X5 589 aa8.02□□□□□ -1.13
TDP1-203ENST00000393454 FUT4P22083 530 aa8.02□□□□□ -1.13
TDP1-203ENST00000393454 RORAP35398 523 aa8.02□□□□□ -1.13
TDP1-203ENST00000393454 RGS8P57771 180 aaPredicted RBP8.02□□□□□ -1.13
TDP1-203ENST00000393454 FOXL2P58012 376 aa8.02□□□□□ -1.13
TDP1-203ENST00000393454 SMIM11AP58511 58 aa8.02□□□□□ -1.13
TDP1-203ENST00000393454 MYBPC1Q00872 1141 aa8.02□□□□□ -1.13
TDP1-203ENST00000393454 ZFP36L1Q07352 338 aaKnown RBP8.02□□□□□ -1.13
TDP1-203ENST00000393454 SPEM2Q0P670 501 aa8.02□□□□□ -1.13
TDP1-203ENST00000393454 IL11RAQ14626 422 aa8.02□□□□□ -1.13
TDP1-203ENST00000393454 ELAVL1Q15717 326 aaKnown RBP8.02□□□□□ -1.13
TDP1-203ENST00000393454 DCST1Q5T197 706 aa8.02□□□□□ -1.13
TDP1-203ENST00000393454 TTC33Q6PID6 262 aaPredicted RBP8.02□□□□□ -1.13
TDP1-203ENST00000393454 MED25Q71SY5 747 aa8.02□□□□□ -1.13
TDP1-203ENST00000393454 ZNF614Q8N883 585 aa8.02□□□□□ -1.13
TDP1-203ENST00000393454 ZNF321PQ8N8H1 164 aa8.02□□□□□ -1.13
TDP1-203ENST00000393454 ZNF615Q8N8J6 731 aa8.02□□□□□ -1.13
TDP1-203ENST00000393454 PIK3C3Q8NEB9 887 aa8.02□□□□□ -1.13
TDP1-203ENST00000393454 C7orf57Q8NEG2 295 aa8.02□□□□□ -1.13
TDP1-203ENST00000393454 SLC2A12Q8TD20 617 aa8.02□□□□□ -1.13
TDP1-203ENST00000393454 MUS81Q96NY9 551 aa8.02□□□□□ -1.13
TDP1-203ENST00000393454 ARHGDIGQ99819 225 aa8.02□□□□□ -1.13
TDP1-203ENST00000393454 ITPAQ9BY32 194 aa8.02□□□□□ -1.13
TDP1-203ENST00000393454 ZNF556Q9HAH1 456 aa8.02□□□□□ -1.13
TDP1-203ENST00000393454 SLC22A11Q9NSA0 550 aa8.02□□□□□ -1.13
TDP1-203ENST00000393454 PNPLA3Q9NST1 481 aa8.02□□□□□ -1.13
TDP1-203ENST00000393454 TRBV4-1A0A0J9YWV2 114 aa8.01□□□□□ -1.13
TDP1-203ENST00000393454 CENPVL1A0A0U1RR11 272 aa8.01□□□□□ -1.13
TDP1-203ENST00000393454 AP3D1O14617 1153 aa8.01□□□□□ -1.13
TDP1-203ENST00000393454 CDX4O14627 284 aaPredicted RBP8.01□□□□□ -1.13
TDP1-203ENST00000393454 PRKNO60260 465 aaPredicted RBP8.01□□□□□ -1.13
TDP1-203ENST00000393454 KIAA0513O60268 411 aa8.01□□□□□ -1.13
TDP1-203ENST00000393454 BRINP1O60477 761 aa8.01□□□□□ -1.13
TDP1-203ENST00000393454 SEMA7AO75326 666 aa8.01□□□□□ -1.13
TDP1-203ENST00000393454 FGF5P12034 268 aa8.01□□□□□ -1.13
TDP1-203ENST00000393454 CCL4P13236 92 aa8.01□□□□□ -1.13
TDP1-203ENST00000393454 ANXA8P13928 327 aa8.01□□□□□ -1.13
TDP1-203ENST00000393454 CD59P13987 128 aa8.01□□□□□ -1.13
TDP1-203ENST00000393454 POU2F1P14859 743 aa8.01□□□□□ -1.13
TDP1-203ENST00000393454 IFNA8P32881 189 aa8.01□□□□□ -1.13
TDP1-203ENST00000393454 TRHRP34981 398 aaPredicted RBP8.01□□□□□ -1.13
TDP1-203ENST00000393454 POLR2IP36954 125 aaKnown RBP8.01□□□□□ -1.13
TDP1-203ENST00000393454 PIGAP37287 484 aa8.01□□□□□ -1.13
TDP1-203ENST00000393454 EFNA3P52797 238 aa8.01□□□□□ -1.13
TDP1-203ENST00000393454 HMGA2P52926 109 aa8.01□□□□□ -1.13
TDP1-203ENST00000393454 TAS2R41P59536 307 aa8.01□□□□□ -1.13
TDP1-203ENST00000393454 HOXC5Q00444 222 aa8.01□□□□□ -1.13
TDP1-203ENST00000393454 NPTX1Q15818 432 aa8.01□□□□□ -1.13
TDP1-203ENST00000393454 MAPK14Q16539 360 aa8.01□□□□□ -1.13
TDP1-203ENST00000393454 LIN52Q52LA3 116 aa8.01□□□□□ -1.13
TDP1-203ENST00000393454 EIPR1Q53HC9 387 aa8.01□□□□□ -1.13
TDP1-203ENST00000393454 FAHD1Q6P587 224 aa8.01□□□□□ -1.13
TDP1-203ENST00000393454 NPSR1Q6W5P4 371 aa8.01□□□□□ -1.13
TDP1-203ENST00000393454 RBM44Q6ZP01 1051 aaKnown RBP8.01□□□□□ -1.13
TDP1-203ENST00000393454 LANCL3Q6ZV70 420 aa8.01□□□□□ -1.13
TDP1-203ENST00000393454 ZAR1Q86SH2 424 aa8.01□□□□□ -1.13
TDP1-203ENST00000393454 BPHLQ86WA6 291 aaPredicted RBP8.01□□□□□ -1.13
TDP1-203ENST00000393454 NAXDQ8IW45 347 aa8.01□□□□□ -1.13
TDP1-203ENST00000393454 ZNF786Q8N393 782 aa8.01□□□□□ -1.13
TDP1-203ENST00000393454 OR9Q2Q8NGE9 314 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms