RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 PRSS23O95084 383 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 ATXN1LP0C7T5 689 aaKnown RBP7.22□□□□□ -1.25
VTI1A-201ENST00000393077 CRABP1P29762 137 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 CD86P42081 329 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 STK19P49842 368 aaPredicted RBP7.22□□□□□ -1.25
VTI1A-201ENST00000393077 CCR9P51686 369 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 CRISP3P54108 245 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 ADIGQ0VDE8 80 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 SERTAD2Q14140 314 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 OR8G1Q15617 311 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 SLC5A12Q1EHB4 618 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.22□□□□□ -1.252e-7■□□□□ 9.3
VTI1A-201ENST00000393077 ADGRF1Q5T601 910 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 WSCD1Q658N2 575 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 TMEM71Q6P5X7 295 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 TMEM107Q6UX40 140 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 BAIAP2L2Q6UXY1 529 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 TAC4Q86UU9 113 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 OR8J1Q8NGP2 316 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 OR10R2Q8NGX6 335 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 HGDQ93099 445 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 PDLIM5Q96HC4 596 aaKnown RBP7.22□□□□□ -1.25
VTI1A-201ENST00000393077 TSGA13Q96PP4 275 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 JAM3Q9BX67 310 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 EXO5Q9H790 373 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 ACKR4Q9NPB9 350 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 TLR8Q9NR97 1041 aaKnown RBP7.22□□□□□ -1.25
VTI1A-201ENST00000393077 CFAP97Q9P2B7 532 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 CLEC2DQ9UHP7 191 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 CORO2BQ9UQ03 480 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 EP400Q96L91 3159 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 ARID1AO14497 2285 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 GOLGA4Q13439 2230 aaKnown RBP7.22□□□□□ -1.25
VTI1A-201ENST00000393077 NPEPPSL1A6NEC2 478 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 MCRIP1C9JLW8 97 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 CCL22O00626 93 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 CLDN4O14493 209 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 WNT9AO14904 365 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 IFNA2P01563 188 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 PMP2P02689 132 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 AHCYP23526 432 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 RPS14P62263 151 aaKnown RBP7.22□□□□□ -1.25
VTI1A-201ENST00000393077 HMGCS1Q01581 520 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 ZNF155Q12901 538 aaPredicted RBP7.22□□□□□ -1.25
VTI1A-201ENST00000393077 CPSF6Q16630 551 aaKnown RBP eCLIP7.22□□□□□ -1.25
VTI1A-201ENST00000393077 TAZQ16635 292 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 ACTBL2Q562R1 376 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 C3orf38Q5JPI3 329 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 PTRHD1Q6GMV3 140 aaKnown RBP7.22□□□□□ -1.25
VTI1A-201ENST00000393077 KIAA0930Q6ICG6 404 aaPredicted RBP7.22□□□□□ -1.25
VTI1A-201ENST00000393077 FIGNL1Q6PIW4 674 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 ARL9Q6T311 187 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 IL20RBQ6UXL0 311 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 TMED4Q7Z7H5 227 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 PIM3Q86V86 326 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 OR6V1Q8N148 313 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 WDTC1Q8N5D0 677 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 PROKR1Q8TCW9 393 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 TAAR8Q969N4 342 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 LINGO1Q96FE5 620 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 TEX37Q96LM6 180 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 COPS8Q99627 209 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 ZNF649Q9BS31 505 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 SPON2Q9BUD6 331 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 KATNB1Q9BVA0 655 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 GGACTQ9BVM4 153 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 ADGRE3Q9BY15 652 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.22□□□□□ -1.25
VTI1A-201ENST00000393077 MRPS30Q9NP92 439 aaKnown RBP7.22□□□□□ -1.25
VTI1A-201ENST00000393077 UPB1Q9UBR1 384 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 ST3GAL5Q9UNP4 418 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 THSD7AQ9UPZ6 1657 aa7.22□□□□□ -1.25
VTI1A-201ENST00000393077 GGT3PA6NGU5 568 aa7.21□□□□□ -1.25
VTI1A-201ENST00000393077 ARNTLO00327 626 aa7.21□□□□□ -1.25
VTI1A-201ENST00000393077 AKR7A3O95154 331 aa7.21□□□□□ -1.25
VTI1A-201ENST00000393077 MT-ND4LP03901 98 aa7.21□□□□□ -1.25
VTI1A-201ENST00000393077 GABRA1P14867 456 aa7.21□□□□□ -1.25
VTI1A-201ENST00000393077 PPIBP23284 216 aaKnown RBP7.21□□□□□ -1.25
VTI1A-201ENST00000393077 GABRR2P28476 465 aa7.21□□□□□ -1.25
VTI1A-201ENST00000393077 SLC6A1P30531 599 aa7.21□□□□□ -1.25
VTI1A-201ENST00000393077 CD52P31358 61 aa7.21□□□□□ -1.25
VTI1A-201ENST00000393077 AKR1C3P42330 323 aa7.21□□□□□ -1.25
VTI1A-201ENST00000393077 OR1E2P47887 323 aa7.21□□□□□ -1.25
VTI1A-201ENST00000393077 ART1P52961 327 aa7.21□□□□□ -1.25
VTI1A-201ENST00000393077 SP3Q02447 781 aa7.21□□□□□ -1.25
VTI1A-201ENST00000393077 NHLH2Q02577 135 aa7.21□□□□□ -1.25
VTI1A-201ENST00000393077 PTGES3Q15185 160 aaKnown RBP7.21□□□□□ -1.25
VTI1A-201ENST00000393077 ST3GAL2Q16842 350 aa7.21□□□□□ -1.25
VTI1A-201ENST00000393077 FAM69AQ5T7M9 428 aa7.21□□□□□ -1.25
VTI1A-201ENST00000393077 ARHGAP11AQ6P4F7 1023 aa7.21□□□□□ -1.25
VTI1A-201ENST00000393077 TTLL10Q6ZVT0 673 aa7.21□□□□□ -1.25
VTI1A-201ENST00000393077 COMTD1Q86VU5 262 aa7.21□□□□□ -1.25
VTI1A-201ENST00000393077 LDLRAD3Q86YD5 345 aa7.21□□□□□ -1.25
VTI1A-201ENST00000393077 POMGNT2Q8NAT1 580 aa7.21□□□□□ -1.25
VTI1A-201ENST00000393077 ZNF599Q96NL3 588 aa7.21□□□□□ -1.25
VTI1A-201ENST00000393077 RIOK2Q9BVS4 552 aaKnown RBP7.21□□□□□ -1.25
VTI1A-201ENST00000393077 CDCA4Q9BXL8 241 aa7.21□□□□□ -1.25
VTI1A-201ENST00000393077 BARHL1Q9BZE3 327 aa7.21□□□□□ -1.25
VTI1A-201ENST00000393077 C20orf85Q9H1P6 137 aa7.21□□□□□ -1.25
VTI1A-201ENST00000393077 CALML5Q9NZT1 146 aa7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms