RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 LRRC34Q8IZ02 419 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 LSMEM2Q8N112 164 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 FBXL16Q8N461 479 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 OR52N2Q8NGI0 321 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 OR4A4PQ8NGN8 299 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 DQX1Q8TE96 717 aaKnown RBP3.28□□□□□ -1.88
XRN1-202ENST00000392981 PCED1BQ96HM7 432 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 APOL2Q9BQE5 337 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 SPRTNQ9H040 489 aaPredicted RBP3.28□□□□□ -1.88
XRN1-202ENST00000392981 GBA3Q9H227 469 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 CAB39LQ9H9S4 337 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 S100A14Q9HCY8 104 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 MED17Q9NVC6 651 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 ASB6Q9NWX5 421 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 ZNF175Q9Y473 711 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 ADGRA2Q96PE1 1338 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 MTUS2Q5JR59 1369 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 OR6C70A6NIJ9 312 aa3.28□□□□□ -1.89
XRN1-202ENST00000392981 ERI2A8K979 691 aaKnown RBP3.28□□□□□ -1.89
XRN1-202ENST00000392981 RNF212BA8MTL3 300 aa3.28□□□□□ -1.89
XRN1-202ENST00000392981 DVL1O14640 695 aa3.28□□□□□ -1.89
XRN1-202ENST00000392981 MOSPD3O75425 235 aa3.28□□□□□ -1.89
XRN1-202ENST00000392981 LYPLA2O95372 231 aa3.28□□□□□ -1.89
XRN1-202ENST00000392981 SRD5A2P31213 254 aa3.28□□□□□ -1.89
XRN1-202ENST00000392981 CD80P33681 288 aa3.28□□□□□ -1.89
XRN1-202ENST00000392981 DNA2P51530 1060 aa3.28□□□□□ -1.89
XRN1-202ENST00000392981 DVL1P1P54792 670 aaPredicted RBP3.28□□□□□ -1.89
XRN1-202ENST00000392981 RAB14P61106 215 aa3.28□□□□□ -1.89
XRN1-202ENST00000392981 SEC61A1P61619 476 aaKnown RBP3.28□□□□□ -1.89
XRN1-202ENST00000392981 RPS4XP62701 263 aaKnown RBP3.28□□□□□ -1.89
XRN1-202ENST00000392981 VSNL1P62760 191 aa3.28□□□□□ -1.89
XRN1-202ENST00000392981 ADAM8P78325 824 aa3.28□□□□□ -1.89
XRN1-202ENST00000392981 CDR2Q01850 454 aa3.28□□□□□ -1.89
XRN1-202ENST00000392981 MTHFSDQ2M296 383 aaKnown RBP3.28□□□□□ -1.89
XRN1-202ENST00000392981 TTMPQ5BVD1 217 aa3.28□□□□□ -1.89
XRN1-202ENST00000392981 OR8G2PQ6IF36 304 aa3.28□□□□□ -1.89
XRN1-202ENST00000392981 MRGPREQ86SM8 312 aa3.28□□□□□ -1.89
XRN1-202ENST00000392981 ARL14EPQ8N8R7 260 aaPredicted RBP3.28□□□□□ -1.89
XRN1-202ENST00000392981 OR4N2Q8NGD1 307 aa3.28□□□□□ -1.89
XRN1-202ENST00000392981 PAQR8Q8TEZ7 354 aa3.28□□□□□ -1.89
XRN1-202ENST00000392981 SLC41A3Q96GZ6 507 aa3.28□□□□□ -1.89
XRN1-202ENST00000392981 PIWIL1Q96J94 861 aaKnown RBP3.28□□□□□ -1.89
XRN1-202ENST00000392981 MCCC1Q96RQ3 725 aaPredicted RBP3.28□□□□□ -1.89
XRN1-202ENST00000392981 RNF41Q9H4P4 317 aaPredicted RBP3.28□□□□□ -1.89
XRN1-202ENST00000392981 CLMPQ9H6B4 373 aa3.28□□□□□ -1.89
XRN1-202ENST00000392981 C8orf4Q9NR00 106 aa3.28□□□□□ -1.89
XRN1-202ENST00000392981 AGPAT4Q9NRZ5 378 aa3.28□□□□□ -1.89
XRN1-202ENST00000392981 NRBP2Q9NSY0 501 aa3.28□□□□□ -1.89
XRN1-202ENST00000392981 STUB1Q9UNE7 303 aa3.28□□□□□ -1.89
XRN1-202ENST00000392981 STRCQ7RTU9 1775 aa3.27□□□□□ -1.89
XRN1-202ENST00000392981 PTPRKQ15262 1439 aa3.27□□□□□ -1.89
XRN1-202ENST00000392981 MIA2Q96PC5 1412 aa3.27□□□□□ -1.89
XRN1-202ENST00000392981 SAMD9LQ8IVG5 1584 aa3.27□□□□□ -1.89
XRN1-202ENST00000392981 PPIAL4CA0A0B4J2A2 164 aa3.27□□□□□ -1.89
XRN1-202ENST00000392981 FBP2O00757 339 aa3.27□□□□□ -1.89
XRN1-202ENST00000392981 DEXIO95424 95 aa3.27□□□□□ -1.89
XRN1-202ENST00000392981 CSN3P07498 182 aa3.27□□□□□ -1.89
XRN1-202ENST00000392981 SLC35G4P0C7Q5 338 aa3.27□□□□□ -1.89
XRN1-202ENST00000392981 PPIAL4GP0DN37 164 aa3.27□□□□□ -1.89
XRN1-202ENST00000392981 UNGP13051 313 aaPredicted RBP3.27□□□□□ -1.89
XRN1-202ENST00000392981 RBMS1P29558 406 aaKnown RBP3.27□□□□□ -1.89
XRN1-202ENST00000392981 TNFSF8P32971 234 aa3.27□□□□□ -1.89
XRN1-202ENST00000392981 RPS19P39019 145 aaKnown RBP3.27□□□□□ -1.89
XRN1-202ENST00000392981 GPR1P46091 355 aa3.27□□□□□ -1.89
XRN1-202ENST00000392981 RASSF2P50749 326 aa3.27□□□□□ -1.89
XRN1-202ENST00000392981 CSTF1Q05048 431 aaKnown RBP3.27□□□□□ -1.89
XRN1-202ENST00000392981 KCTD19Q17RG1 926 aaPredicted RBP3.27□□□□□ -1.89
XRN1-202ENST00000392981 SLC9C1Q4G0N8 1177 aa3.27□□□□□ -1.89
XRN1-202ENST00000392981 TEX44Q53QW1 395 aa3.27□□□□□ -1.89
XRN1-202ENST00000392981 OR7E24Q6IFN5 339 aa3.27□□□□□ -1.89
XRN1-202ENST00000392981 CAPN13Q6MZZ7 669 aaPredicted RBP3.27□□□□□ -1.89
XRN1-202ENST00000392981 FAM159AQ6UWV7 190 aa3.27□□□□□ -1.89
XRN1-202ENST00000392981 PLEKHG7Q6ZR37 379 aa3.27□□□□□ -1.89
XRN1-202ENST00000392981 LRRC55Q6ZSA7 311 aa3.27□□□□□ -1.89
XRN1-202ENST00000392981 ZNF534Q76KX8 674 aa3.27□□□□□ -1.89
XRN1-202ENST00000392981 RP9Q8TA86 221 aaKnown RBP3.27□□□□□ -1.89
XRN1-202ENST00000392981 SPRYD4Q8WW59 207 aaPredicted RBP3.27□□□□□ -1.89
XRN1-202ENST00000392981 NXPE2Q96DL1 559 aa3.27□□□□□ -1.89
XRN1-202ENST00000392981 C3orf30Q96M34 536 aa3.27□□□□□ -1.89
XRN1-202ENST00000392981 ZNF578Q96N58 590 aaPredicted RBP3.27□□□□□ -1.89
XRN1-202ENST00000392981 CGREF1Q99674 301 aa3.27□□□□□ -1.89
XRN1-202ENST00000392981 OMDQ99983 421 aa3.27□□□□□ -1.89
XRN1-202ENST00000392981 MRPS26Q9BYN8 205 aaKnown RBP3.27□□□□□ -1.89
XRN1-202ENST00000392981 NT5MQ9NPB1 228 aa3.27□□□□□ -1.89
XRN1-202ENST00000392981 MIOXQ9UGB7 285 aa3.27□□□□□ -1.89
XRN1-202ENST00000392981 C14orf166Q9Y224 244 aaKnown RBP3.27□□□□□ -1.89
XRN1-202ENST00000392981 RANBP2P49792 3224 aaKnown RBP3.27□□□□□ -1.89
XRN1-202ENST00000392981 MROH2AA6NES4 1674 aa3.27□□□□□ -1.89
XRN1-202ENST00000392981 POLR1AO95602 1720 aaPredicted RBP3.27□□□□□ -1.89
XRN1-202ENST00000392981 MYO5CQ9NQX4 1742 aa3.27□□□□□ -1.89
XRN1-202ENST00000392981 CCL24O00175 119 aa3.27□□□□□ -1.89
XRN1-202ENST00000392981 HUS1O60921 280 aa3.27□□□□□ -1.89
XRN1-202ENST00000392981 CDC123O75794 336 aaPredicted RBP3.27□□□□□ -1.89
XRN1-202ENST00000392981 SCELO95171 688 aa3.27□□□□□ -1.89
XRN1-202ENST00000392981 IFNW1P05000 195 aa3.27□□□□□ -1.89
XRN1-202ENST00000392981 POLR2EP19388 210 aaKnown RBP3.27□□□□□ -1.89
XRN1-202ENST00000392981 NT5EP21589 574 aa3.27□□□□□ -1.89
XRN1-202ENST00000392981 FASP25445 335 aa3.27□□□□□ -1.89
XRN1-202ENST00000392981 ATP5A1P25705 553 aaKnown RBP3.27□□□□□ -1.89
XRN1-202ENST00000392981 C21orf33P30042 268 aaPredicted RBP3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms