RNA–Protein interactions for RNA: ENST00000392246.6

SUMO1-203, Transcript of small ubiquitin-like modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO1, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-203ENST00000392246 AK1P00568 194 aa13.71□□□□□ -0.21
SUMO1-203ENST00000392246 P04436 131 aa13.71□□□□□ -0.21
SUMO1-203ENST00000392246 NME2P22392 152 aa13.71□□□□□ -0.21
SUMO1-203ENST00000392246 CRATP43155 626 aa13.71□□□□□ -0.21
SUMO1-203ENST00000392246 RFX3P48380 749 aa13.71□□□□□ -0.21
SUMO1-203ENST00000392246 NFATC3Q12968 1075 aa13.71□□□□□ -0.21
SUMO1-203ENST00000392246 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.71□□□□□ -0.21
SUMO1-203ENST00000392246 TRMT5Q32P41 509 aaKnown RBP13.71□□□□□ -0.21
SUMO1-203ENST00000392246 RUNDC3AQ59EK9 446 aa13.71□□□□□ -0.21
SUMO1-203ENST00000392246 COX20Q5RI15 118 aa13.71□□□□□ -0.21
SUMO1-203ENST00000392246 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.71□□□□□ -0.21
SUMO1-203ENST00000392246 ATAD3BQ5T9A4 648 aa13.71□□□□□ -0.21
SUMO1-203ENST00000392246 RPUSD3Q6P087 351 aaKnown RBP13.71□□□□□ -0.21
SUMO1-203ENST00000392246 SPPL2AQ8TCT8 520 aa13.71□□□□□ -0.21
SUMO1-203ENST00000392246 XAGE5Q8WWM1 108 aa13.71□□□□□ -0.21
SUMO1-203ENST00000392246 HGDQ93099 445 aa13.71□□□□□ -0.21
SUMO1-203ENST00000392246 BBC3Q96PG8 261 aaPredicted RBP13.71□□□□□ -0.21
SUMO1-203ENST00000392246 CGREF1Q99674 301 aa13.71□□□□□ -0.21
SUMO1-203ENST00000392246 G6PC3Q9BUM1 346 aa13.71□□□□□ -0.21
SUMO1-203ENST00000392246 HES7Q9BYE0 225 aa13.71□□□□□ -0.21
SUMO1-203ENST00000392246 SACM1LQ9NTJ5 587 aa13.71□□□□□ -0.21
SUMO1-203ENST00000392246 GID8Q9NWU2 228 aa13.71□□□□□ -0.21
SUMO1-203ENST00000392246 CORO2BQ9UQ03 480 aa13.71□□□□□ -0.21
SUMO1-203ENST00000392246 KLF13Q9Y2Y9 288 aaPredicted RBP13.71□□□□□ -0.21
SUMO1-203ENST00000392246 ATRXP46100 2492 aa13.71□□□□□ -0.21
SUMO1-203ENST00000392246 TLN1Q9Y490 2541 aaKnown RBP13.7□□□□□ -0.22
SUMO1-203ENST00000392246 EVPLLA8MZ36 301 aa13.7□□□□□ -0.22
SUMO1-203ENST00000392246 HMGN4O00479 90 aa13.7□□□□□ -0.22
SUMO1-203ENST00000392246 HS6ST1O60243 411 aa13.7□□□□□ -0.22
SUMO1-203ENST00000392246 IGKV1D-16P01601 117 aa13.7□□□□□ -0.22
SUMO1-203ENST00000392246 CCL3P10147 92 aa13.7□□□□□ -0.22
SUMO1-203ENST00000392246 CNR1P21554 472 aa13.7□□□□□ -0.22
SUMO1-203ENST00000392246 LCN1P31025 176 aa13.7□□□□□ -0.22
SUMO1-203ENST00000392246 MVDP53602 400 aa13.7□□□□□ -0.22
SUMO1-203ENST00000392246 FADDQ13158 208 aa13.7□□□□□ -0.22
SUMO1-203ENST00000392246 RGNQ15493 299 aa13.7□□□□□ -0.22
SUMO1-203ENST00000392246 DCST2Q5T1A1 773 aa13.7□□□□□ -0.22
SUMO1-203ENST00000392246 FAM91A1Q658Y4 838 aa13.7□□□□□ -0.22
SUMO1-203ENST00000392246 FIGNL1Q6PIW4 674 aa13.7□□□□□ -0.22
SUMO1-203ENST00000392246 C16orf62Q7Z3J2 963 aa13.7□□□□□ -0.22
SUMO1-203ENST00000392246 GALNTL5Q7Z4T8 443 aa13.7□□□□□ -0.22
SUMO1-203ENST00000392246 FBXW8Q8N3Y1 598 aa13.7□□□□□ -0.22
SUMO1-203ENST00000392246 RAB8BQ92930 207 aa13.7□□□□□ -0.22
SUMO1-203ENST00000392246 LRRC58Q96CX6 371 aa13.7□□□□□ -0.22
SUMO1-203ENST00000392246 RCN3Q96D15 328 aa13.7□□□□□ -0.22
SUMO1-203ENST00000392246 ANKRD27Q96NW4 1050 aa13.7□□□□□ -0.22
SUMO1-203ENST00000392246 EFCAB1Q9HAE3 211 aa13.7□□□□□ -0.22
SUMO1-203ENST00000392246 THUMPD1Q9NXG2 353 aaKnown RBP13.7□□□□□ -0.22
SUMO1-203ENST00000392246 ANAPC2Q9UJX6 822 aa13.7□□□□□ -0.22
SUMO1-203ENST00000392246 ANKRD33BA6NCL7 494 aa13.69□□□□□ -0.22
SUMO1-203ENST00000392246 KLRC4-KLRK1H3BQV0 150 aa13.69□□□□□ -0.22
SUMO1-203ENST00000392246 CYP4B1P13584 511 aa13.69□□□□□ -0.22
SUMO1-203ENST00000392246 ATP6V1C1P21283 382 aa13.69□□□□□ -0.22
SUMO1-203ENST00000392246 ARHGAP11BQ3KRB8 267 aa13.69□□□□□ -0.22
SUMO1-203ENST00000392246 TBCELQ5QJ74 424 aa13.69□□□□□ -0.22
SUMO1-203ENST00000392246 CCNJQ5T5M9 372 aa13.69□□□□□ -0.22
SUMO1-203ENST00000392246 DESI1Q6ICB0 168 aa13.69□□□□□ -0.22
SUMO1-203ENST00000392246 HEPHL1Q6MZM0 1159 aa13.69□□□□□ -0.22
SUMO1-203ENST00000392246 TMEM81Q6P7N7 255 aa13.69□□□□□ -0.22
SUMO1-203ENST00000392246 SULF2Q8IWU5 870 aa13.69□□□□□ -0.22
SUMO1-203ENST00000392246 FITM2Q8N6M3 262 aa13.69□□□□□ -0.22
SUMO1-203ENST00000392246 Q8NA96 180 aa13.69□□□□□ -0.22
SUMO1-203ENST00000392246 FAM98AQ8NCA5 519 aaKnown RBP13.69□□□□□ -0.22
SUMO1-203ENST00000392246 CHDHQ8NE62 594 aaPredicted RBP13.69□□□□□ -0.22
SUMO1-203ENST00000392246 NODALQ96S42 347 aa13.69□□□□□ -0.22
SUMO1-203ENST00000392246 SDF2Q99470 211 aa13.69□□□□□ -0.22
SUMO1-203ENST00000392246 METTL7AQ9H8H3 244 aa13.69□□□□□ -0.22
SUMO1-203ENST00000392246 CNOT11Q9UKZ1 510 aaKnown RBP13.69□□□□□ -0.22
SUMO1-203ENST00000392246 LIPT1Q9Y234 373 aa13.69□□□□□ -0.22
SUMO1-203ENST00000392246 PCDHGA10Q9Y5H3 936 aa13.69□□□□□ -0.22
SUMO1-203ENST00000392246 IGSF10Q6WRI0 2623 aa13.69□□□□□ -0.22
SUMO1-203ENST00000392246 AIM2O14862 343 aa13.69□□□□□ -0.22
SUMO1-203ENST00000392246 PEX1O43933 1283 aa13.69□□□□□ -0.22
SUMO1-203ENST00000392246 ETFAP13804 333 aa13.69□□□□□ -0.22
SUMO1-203ENST00000392246 GPX2P18283 190 aa13.69□□□□□ -0.22
SUMO1-203ENST00000392246 CASP3P42574 277 aa13.69□□□□□ -0.22
SUMO1-203ENST00000392246 DSTNP60981 165 aa13.69□□□□□ -0.22
SUMO1-203ENST00000392246 SNTA1Q13424 505 aa13.69□□□□□ -0.22
SUMO1-203ENST00000392246 INAQ16352 499 aa13.69□□□□□ -0.22
SUMO1-203ENST00000392246 PRAMEF20Q5VT98 475 aa13.69□□□□□ -0.22
SUMO1-203ENST00000392246 GALNT10Q86SR1 603 aa13.69□□□□□ -0.22
SUMO1-203ENST00000392246 ROPN1LQ96C74 230 aa13.69□□□□□ -0.22
SUMO1-203ENST00000392246 SH3GL1Q99961 368 aa13.69□□□□□ -0.22
SUMO1-203ENST00000392246 CPPED1Q9BRF8 314 aaPredicted RBP13.69□□□□□ -0.22
SUMO1-203ENST00000392246 THUMPD3Q9BV44 507 aaKnown RBP13.69□□□□□ -0.22
SUMO1-203ENST00000392246 FBXO34Q9NWN3 711 aa13.69□□□□□ -0.22
SUMO1-203ENST00000392246 LUZP4Q9P127 313 aa13.69□□□□□ -0.22
SUMO1-203ENST00000392246 COL6A6A6NMZ7 2263 aa13.68□□□□□ -0.22
SUMO1-203ENST00000392246 ICOSLGO75144 302 aa13.68□□□□□ -0.22
SUMO1-203ENST00000392246 STX11O75558 287 aa13.68□□□□□ -0.22
SUMO1-203ENST00000392246 SORBS2O94875 1100 aaKnown RBP13.68□□□□□ -0.22
SUMO1-203ENST00000392246 SNX4O95219 450 aa13.68□□□□□ -0.22
SUMO1-203ENST00000392246 RASAL1O95294 804 aa13.68□□□□□ -0.22
SUMO1-203ENST00000392246 UTS2O95399 124 aa13.68□□□□□ -0.22
SUMO1-203ENST00000392246 BMP2P12643 396 aa13.68□□□□□ -0.22
SUMO1-203ENST00000392246 EVI2BP34910 448 aa13.68□□□□□ -0.22
SUMO1-203ENST00000392246 GPR85P60893 370 aa13.68□□□□□ -0.22
SUMO1-203ENST00000392246 ART3Q13508 389 aa13.68□□□□□ -0.22
SUMO1-203ENST00000392246 CAPRIN1Q14444 709 aaKnown RBP13.68□□□□□ -0.22
SUMO1-203ENST00000392246 KRT72Q14CN4 511 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms