RNA–Protein interactions for RNA: ENST00000391944.7

ERCC2-203, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC2, Length 2,334 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-203ENST00000391944 ZNF730Q6ZMV8 503 aa17.8■□□□□ 0.44
ERCC2-203ENST00000391944 IQCF1Q8N6M8 205 aa17.8■□□□□ 0.44
ERCC2-203ENST00000391944 COX18Q8N8Q8 333 aa17.8■□□□□ 0.44
ERCC2-203ENST00000391944 RPL3LQ92901 407 aaKnown RBP17.8■□□□□ 0.44
ERCC2-203ENST00000391944 SLC38A3Q99624 504 aa17.8■□□□□ 0.44
ERCC2-203ENST00000391944 TVP23BQ9NYZ1 205 aa17.8■□□□□ 0.44
ERCC2-203ENST00000391944 OR5F1O95221 314 aa17.79■□□□□ 0.44
ERCC2-203ENST00000391944 DBIP07108 87 aaKnown RBP17.79■□□□□ 0.44
ERCC2-203ENST00000391944 NCS1P62166 190 aa17.79■□□□□ 0.44
ERCC2-203ENST00000391944 TSPAN31Q12999 210 aa17.79■□□□□ 0.44
ERCC2-203ENST00000391944 DECR1Q16698 335 aa17.79■□□□□ 0.44
ERCC2-203ENST00000391944 SLC25A30Q5SVS4 291 aa17.79■□□□□ 0.44
ERCC2-203ENST00000391944 ACSM5Q6NUN0 579 aa17.79■□□□□ 0.44
ERCC2-203ENST00000391944 PLEKHM3Q6ZWE6 761 aa17.79■□□□□ 0.44
ERCC2-203ENST00000391944 RRM2BQ7LG56 351 aa17.79■□□□□ 0.44
ERCC2-203ENST00000391944 SLC46A3Q7Z3Q1 461 aa17.79■□□□□ 0.44
ERCC2-203ENST00000391944 ZBTB46Q86UZ6 589 aa17.79■□□□□ 0.44
ERCC2-203ENST00000391944 KIF18BQ86Y91 864 aa17.79■□□□□ 0.44
ERCC2-203ENST00000391944 FAM26EQ8N5C1 309 aa17.79■□□□□ 0.44
ERCC2-203ENST00000391944 TOR1AIP2Q8NFQ8 470 aa17.79■□□□□ 0.44
ERCC2-203ENST00000391944 ACOT11Q8WXI4 607 aaPredicted RBP17.79■□□□□ 0.44
ERCC2-203ENST00000391944 PIK3R3Q92569 461 aa17.79■□□□□ 0.44
ERCC2-203ENST00000391944 HLA-CQ95604 372 aa17.79■□□□□ 0.44
ERCC2-203ENST00000391944 DNAJC27Q9NZQ0 273 aa17.79■□□□□ 0.44
ERCC2-203ENST00000391944 NTNG1Q9Y2I2 539 aa17.79■□□□□ 0.44
ERCC2-203ENST00000391944 A0A0A6YYC8 382 aaPredicted RBP17.78■□□□□ 0.44
ERCC2-203ENST00000391944 CENPVL1A0A0U1RR11 272 aa17.78■□□□□ 0.44
ERCC2-203ENST00000391944 I3L1I5 382 aaPredicted RBP17.78■□□□□ 0.44
ERCC2-203ENST00000391944 AK1P00568 194 aa17.78■□□□□ 0.44
ERCC2-203ENST00000391944 THY1P04216 161 aa17.78■□□□□ 0.44
ERCC2-203ENST00000391944 ADRA2AP08913 450 aa17.78■□□□□ 0.44
ERCC2-203ENST00000391944 PCYT1AP49585 367 aa17.78■□□□□ 0.44
ERCC2-203ENST00000391944 SKP1P63208 163 aa17.78■□□□□ 0.44
ERCC2-203ENST00000391944 EFNB1P98172 346 aa17.78■□□□□ 0.44
ERCC2-203ENST00000391944 MAP4K2Q12851 820 aa17.78■□□□□ 0.44
ERCC2-203ENST00000391944 MAPK14Q16539 360 aa17.78■□□□□ 0.44
ERCC2-203ENST00000391944 MFSD4BQ5TF39 518 aa17.78■□□□□ 0.44
ERCC2-203ENST00000391944 MEDAGQ5VYS4 303 aa17.78■□□□□ 0.44
ERCC2-203ENST00000391944 PTCRAQ6ISU1 281 aaPredicted RBP17.78■□□□□ 0.44
ERCC2-203ENST00000391944 GDF7Q7Z4P5 450 aa17.78■□□□□ 0.44
ERCC2-203ENST00000391944 NKAIN4Q8IVV8 208 aa17.78■□□□□ 0.44
ERCC2-203ENST00000391944 DYNC2LI1Q8TCX1 351 aa17.78■□□□□ 0.44
ERCC2-203ENST00000391944 GPR151Q8TDV0 419 aa17.78■□□□□ 0.44
ERCC2-203ENST00000391944 PMM1Q92871 262 aa17.78■□□□□ 0.44
ERCC2-203ENST00000391944 BORCS5Q969J3 196 aa17.78■□□□□ 0.44
ERCC2-203ENST00000391944 SLC41A3Q96GZ6 507 aa17.78■□□□□ 0.44
ERCC2-203ENST00000391944 MIR1-1HGQ9H1L0 117 aa17.78■□□□□ 0.44
ERCC2-203ENST00000391944 RPL36Q9Y3U8 105 aaKnown RBP17.78■□□□□ 0.44
ERCC2-203ENST00000391944 FOXS1O43638 330 aa17.78■□□□□ 0.44
ERCC2-203ENST00000391944 MED26O95402 600 aa17.78■□□□□ 0.44
ERCC2-203ENST00000391944 CBX7O95931 251 aa17.78■□□□□ 0.44
ERCC2-203ENST00000391944 RNH1P13489 461 aaKnown RBP17.78■□□□□ 0.44
ERCC2-203ENST00000391944 OMPP47874 163 aa17.78■□□□□ 0.44
ERCC2-203ENST00000391944 ZNF136P52737 540 aa17.78■□□□□ 0.44
ERCC2-203ENST00000391944 SMSP52788 366 aa17.78■□□□□ 0.44
ERCC2-203ENST00000391944 RPL6Q02878 288 aaKnown RBP17.78■□□□□ 0.44
ERCC2-203ENST00000391944 COL13A1Q5TAT6 717 aaPredicted RBP17.78■□□□□ 0.44
ERCC2-203ENST00000391944 AP1ARQ63HQ0 302 aa17.78■□□□□ 0.44
ERCC2-203ENST00000391944 DGAT2L6Q6ZPD8 337 aa17.78■□□□□ 0.44
ERCC2-203ENST00000391944 LINC00299Q6ZSB3 139 aa17.78■□□□□ 0.44
ERCC2-203ENST00000391944 ZNF367Q7RTV3 350 aa17.78■□□□□ 0.44
ERCC2-203ENST00000391944 SLCO6A1Q86UG4 719 aa17.78■□□□□ 0.44
ERCC2-203ENST00000391944 PIGXQ8TBF5 258 aa17.78■□□□□ 0.44
ERCC2-203ENST00000391944 HOXB13Q92826 284 aaPredicted RBP17.78■□□□□ 0.44
ERCC2-203ENST00000391944 SHDQ96IW2 340 aa17.78■□□□□ 0.44
ERCC2-203ENST00000391944 NELL2Q99435 816 aa17.78■□□□□ 0.44
ERCC2-203ENST00000391944 FBXO34Q9NWN3 711 aa17.78■□□□□ 0.44
ERCC2-203ENST00000391944 WNT16Q9UBV4 365 aa17.78■□□□□ 0.44
ERCC2-203ENST00000391944 THADAQ6YHU6 1953 aa17.78■□□□□ 0.44
ERCC2-203ENST00000391944 EFCAB9A8MZ26 197 aa17.77■□□□□ 0.44
ERCC2-203ENST00000391944 AQP9O43315 295 aa17.77■□□□□ 0.44
ERCC2-203ENST00000391944 TLX2O43763 284 aaPredicted RBP17.77■□□□□ 0.44
ERCC2-203ENST00000391944 PRKYO43930 277 aa17.77■□□□□ 0.44
ERCC2-203ENST00000391944 KIAA0513O60268 411 aa17.77■□□□□ 0.44
ERCC2-203ENST00000391944 OR10H2O60403 315 aa17.77■□□□□ 0.44
ERCC2-203ENST00000391944 CALRP27797 417 aaKnown RBP17.77■□□□□ 0.44
ERCC2-203ENST00000391944 NCF4Q15080 339 aa17.77■□□□□ 0.44
ERCC2-203ENST00000391944 NIPAL1Q6NVV3 410 aa17.77■□□□□ 0.44
ERCC2-203ENST00000391944 RASSF6Q6ZTQ3 369 aa17.77■□□□□ 0.44
ERCC2-203ENST00000391944 VWA5B2Q8N398 1253 aa17.77■□□□□ 0.44
ERCC2-203ENST00000391944 ZNF285Q96NJ3 590 aa17.77■□□□□ 0.44
ERCC2-203ENST00000391944 PLA2G12AQ9BZM1 189 aa17.77■□□□□ 0.44
ERCC2-203ENST00000391944 TAS2R16Q9NYV7 291 aa17.77■□□□□ 0.44
ERCC2-203ENST00000391944 LMO7DNF2Z398 122 aa17.77■□□□□ 0.43
ERCC2-203ENST00000391944 AIREO43918 545 aa17.77■□□□□ 0.43
ERCC2-203ENST00000391944 SOX30O94993 753 aa17.77■□□□□ 0.43
ERCC2-203ENST00000391944 NKX2-2O95096 273 aa17.77■□□□□ 0.43
ERCC2-203ENST00000391944 NID1P14543 1247 aa17.77■□□□□ 0.43
ERCC2-203ENST00000391944 GABRA3P34903 492 aa17.77■□□□□ 0.43
ERCC2-203ENST00000391944 GABRA4P48169 554 aa17.77■□□□□ 0.43
ERCC2-203ENST00000391944 HNRNPKP61978 463 aaKnown RBP eCLIP17.77■□□□□ 0.43
ERCC2-203ENST00000391944 FAM53BQ14153 422 aa17.77■□□□□ 0.43
ERCC2-203ENST00000391944 DGUOKQ16854 277 aa17.77■□□□□ 0.43
ERCC2-203ENST00000391944 ARMCX4Q5H9R4 360 aa17.77■□□□□ 0.43
ERCC2-203ENST00000391944 OGFOD3Q6PK18 319 aa17.77■□□□□ 0.43
ERCC2-203ENST00000391944 MEX3DQ86XN8 651 aaKnown RBP17.77■□□□□ 0.43
ERCC2-203ENST00000391944 C1orf216Q8TAB5 229 aa17.77■□□□□ 0.43
ERCC2-203ENST00000391944 FGF11Q92914 225 aa17.77■□□□□ 0.43
ERCC2-203ENST00000391944 VMP1Q96GC9 406 aa17.77■□□□□ 0.43
ERCC2-203ENST00000391944 EGLN3Q9H6Z9 239 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms