RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 SLC38A6Q8IZM9 456 aa13.46□□□□□ -0.25
RTF1-201ENST00000389629 BEST3Q8N1M1 668 aa13.46□□□□□ -0.25
RTF1-201ENST00000389629 ZBTB44Q8NCP5 570 aa13.46□□□□□ -0.25
RTF1-201ENST00000389629 STOML3Q8TAV4 291 aa13.46□□□□□ -0.25
RTF1-201ENST00000389629 ZDHHC1Q8WTX9 485 aa13.46□□□□□ -0.25
RTF1-201ENST00000389629 TRIB2Q92519 343 aa13.46□□□□□ -0.25
RTF1-201ENST00000389629 KLK6Q92876 244 aa13.46□□□□□ -0.25
RTF1-201ENST00000389629 ADAD1Q96M93 576 aaKnown RBP13.46□□□□□ -0.25
RTF1-201ENST00000389629 PDFQ9HBH1 243 aa13.46□□□□□ -0.25
RTF1-201ENST00000389629 MED31Q9Y3C7 131 aa13.46□□□□□ -0.25
RTF1-201ENST00000389629 CACNA1CQ13936 2221 aa13.46□□□□□ -0.25
RTF1-201ENST00000389629 DUXAA6NLW8 204 aa13.46□□□□□ -0.25
RTF1-201ENST00000389629 FARS2O95363 451 aaKnown RBP13.46□□□□□ -0.25
RTF1-201ENST00000389629 ITPKBP27987 946 aa13.46□□□□□ -0.25
RTF1-201ENST00000389629 HLA-DMAP28067 261 aa13.46□□□□□ -0.25
RTF1-201ENST00000389629 RBM34P42696 430 aaKnown RBP13.46□□□□□ -0.25
RTF1-201ENST00000389629 PTH2RP49190 550 aa13.46□□□□□ -0.25
RTF1-201ENST00000389629 CHRNEQ04844 493 aa13.46□□□□□ -0.25
RTF1-201ENST00000389629 HYAL4Q2M3T9 481 aa13.46□□□□□ -0.25
RTF1-201ENST00000389629 LYPD8Q6UX82 237 aa13.46□□□□□ -0.25
RTF1-201ENST00000389629 LRRC28Q86X40 367 aaPredicted RBP13.46□□□□□ -0.25
RTF1-201ENST00000389629 ST6GAL2Q96JF0 529 aa13.46□□□□□ -0.25
RTF1-201ENST00000389629 TMEM175Q9BSA9 504 aa13.46□□□□□ -0.25
RTF1-201ENST00000389629 PTPRFP10586 1907 aa13.46□□□□□ -0.26
RTF1-201ENST00000389629 EPCAMP16422 314 aa13.46□□□□□ -0.26
RTF1-201ENST00000389629 DNASE1L1P49184 302 aa13.46□□□□□ -0.26
RTF1-201ENST00000389629 ERVFC1P60507 584 aa13.46□□□□□ -0.26
RTF1-201ENST00000389629 ZNF33BQ06732 778 aa13.46□□□□□ -0.26
RTF1-201ENST00000389629 METTL11BQ5VVY1 283 aa13.46□□□□□ -0.26
RTF1-201ENST00000389629 LIMS2Q7Z4I7 341 aa13.46□□□□□ -0.26
RTF1-201ENST00000389629 TMPRSS12Q86WS5 348 aa13.46□□□□□ -0.26
RTF1-201ENST00000389629 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.46□□□□□ -0.26
RTF1-201ENST00000389629 FBXO15Q8NCQ5 510 aaPredicted RBP13.46□□□□□ -0.26
RTF1-201ENST00000389629 OR52E4Q8NGH9 312 aa13.46□□□□□ -0.26
RTF1-201ENST00000389629 BBS10Q8TAM1 723 aa13.46□□□□□ -0.26
RTF1-201ENST00000389629 SLC23A1Q9UHI7 598 aa13.46□□□□□ -0.26
RTF1-201ENST00000389629 SCP2D1Q9UJQ7 156 aa13.46□□□□□ -0.26
RTF1-201ENST00000389629 SH2B3Q9UQQ2 575 aa13.46□□□□□ -0.26
RTF1-201ENST00000389629 RCE1Q9Y256 329 aa13.46□□□□□ -0.26
RTF1-201ENST00000389629 PRSS23O95084 383 aa13.46□□□□□ -0.26
RTF1-201ENST00000389629 TCRBP04435 133 aa13.46□□□□□ -0.26
RTF1-201ENST00000389629 GNALP38405 381 aa13.46□□□□□ -0.26
RTF1-201ENST00000389629 EIPR1Q53HC9 387 aa13.46□□□□□ -0.26
RTF1-201ENST00000389629 MORN1Q5T089 497 aa13.46□□□□□ -0.26
RTF1-201ENST00000389629 STX12Q86Y82 276 aa13.46□□□□□ -0.26
RTF1-201ENST00000389629 SDR16C5Q8N3Y7 309 aa13.46□□□□□ -0.26
RTF1-201ENST00000389629 OR5W2Q8NH69 310 aa13.46□□□□□ -0.26
RTF1-201ENST00000389629 CNOT9Q92600 299 aaKnown RBP13.46□□□□□ -0.26
RTF1-201ENST00000389629 OPALINQ96PE5 141 aa13.46□□□□□ -0.26
RTF1-201ENST00000389629 MFFQ9GZY8 342 aa13.46□□□□□ -0.26
RTF1-201ENST00000389629 DMRT3Q9NQL9 472 aa13.46□□□□□ -0.26
RTF1-201ENST00000389629 LYARQ9NX58 379 aaKnown RBP13.46□□□□□ -0.26
RTF1-201ENST00000389629 ARID1AO14497 2285 aa13.46□□□□□ -0.26
RTF1-201ENST00000389629 CIB4A0PJX0 185 aa13.45□□□□□ -0.26
RTF1-201ENST00000389629 PRH1P02810 166 aa13.45□□□□□ -0.26
RTF1-201ENST00000389629 GABRA5P31644 462 aa13.45□□□□□ -0.26
RTF1-201ENST00000389629 ARL4DP49703 201 aa13.45□□□□□ -0.26
RTF1-201ENST00000389629 CTSCP53634 463 aa13.45□□□□□ -0.26
RTF1-201ENST00000389629 GPALPP1Q8IXQ4 340 aa13.45□□□□□ -0.26
RTF1-201ENST00000389629 TP53I13Q8NBR0 393 aaPredicted RBP13.45□□□□□ -0.26
RTF1-201ENST00000389629 TMEM185AQ8NFB2 350 aa13.45□□□□□ -0.26
RTF1-201ENST00000389629 S100A13Q99584 98 aa13.45□□□□□ -0.26
RTF1-201ENST00000389629 SYNPO2LQ9H987 977 aa13.45□□□□□ -0.26
RTF1-201ENST00000389629 PLCXD1Q9NUJ7 323 aa13.45□□□□□ -0.26
RTF1-201ENST00000389629 DEC1Q9P2X7 70 aa13.45□□□□□ -0.26
RTF1-201ENST00000389629 ACADLP28330 430 aa13.45□□□□□ -0.26
RTF1-201ENST00000389629 PDHA2P29803 388 aa13.45□□□□□ -0.26
RTF1-201ENST00000389629 ID2Q02363 134 aa13.45□□□□□ -0.26
RTF1-201ENST00000389629 GPR50Q13585 617 aa13.45□□□□□ -0.26
RTF1-201ENST00000389629 KLHL26Q53HC5 615 aa13.45□□□□□ -0.26
RTF1-201ENST00000389629 TCTE1Q5JU00 501 aa13.45□□□□□ -0.26
RTF1-201ENST00000389629 PLPP4Q5VZY2 271 aa13.45□□□□□ -0.26
RTF1-201ENST00000389629 OR52I1Q8NGK6 324 aa13.45□□□□□ -0.26
RTF1-201ENST00000389629 GSX2Q9BZM3 304 aa13.45□□□□□ -0.26
RTF1-201ENST00000389629 B4GALT3O60512 393 aa13.45□□□□□ -0.26
RTF1-201ENST00000389629 SOX30O94993 753 aa13.45□□□□□ -0.26
RTF1-201ENST00000389629 PAK4O96013 591 aaPredicted RBP13.45□□□□□ -0.26
RTF1-201ENST00000389629 ARAFP10398 606 aa13.45□□□□□ -0.26
RTF1-201ENST00000389629 ACP2P11117 423 aa13.45□□□□□ -0.26
RTF1-201ENST00000389629 SHC1P29353 583 aa13.45□□□□□ -0.26
RTF1-201ENST00000389629 GK2Q14410 553 aaPredicted RBP13.45□□□□□ -0.26
RTF1-201ENST00000389629 GPR176Q14439 515 aa13.45□□□□□ -0.26
RTF1-201ENST00000389629 BCL2A1Q16548 175 aa13.45□□□□□ -0.26
RTF1-201ENST00000389629 LY6G5CQ5SRR4 150 aa13.45□□□□□ -0.26
RTF1-201ENST00000389629 TMEM107Q6UX40 140 aa13.45□□□□□ -0.26
RTF1-201ENST00000389629 PTOV1Q86YD1 416 aa13.45□□□□□ -0.26
RTF1-201ENST00000389629 HDDC3Q8N4P3 179 aa13.45□□□□□ -0.26
RTF1-201ENST00000389629 HORMAD2Q8N7B1 307 aa13.45□□□□□ -0.26
RTF1-201ENST00000389629 ISG20Q96AZ6 181 aaKnown RBP13.45□□□□□ -0.26
RTF1-201ENST00000389629 MS4A4AQ96JQ5 239 aa13.45□□□□□ -0.26
RTF1-201ENST00000389629 PKMYT1Q99640 499 aa13.45□□□□□ -0.26
RTF1-201ENST00000389629 ACSL5Q9ULC5 683 aa13.45□□□□□ -0.26
RTF1-201ENST00000389629 WNT6Q9Y6F9 365 aa13.45□□□□□ -0.26
RTF1-201ENST00000389629 URADA6NGE7 173 aa13.45□□□□□ -0.26
RTF1-201ENST00000389629 RGS13O14921 159 aa13.45□□□□□ -0.26
RTF1-201ENST00000389629 MC2RQ01718 297 aa13.45□□□□□ -0.26
RTF1-201ENST00000389629 SYPL1Q16563 259 aa13.45□□□□□ -0.26
RTF1-201ENST00000389629 DCUN1D3Q8IWE4 304 aa13.45□□□□□ -0.26
RTF1-201ENST00000389629 OR56A1Q8NGH5 318 aa13.45□□□□□ -0.26
RTF1-201ENST00000389629 ZNF563Q8TA94 476 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms