RNA–Protein interactions for RNA: ENST00000381029.4

VCX3B-201, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-201ENST00000381029 EFR3AQ14156 821 aa13.53□□□□□ -0.24
VCX3B-201ENST00000381029 ZNHIT3Q15649 155 aaPredicted RBP13.53□□□□□ -0.24
VCX3B-201ENST00000381029 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.53□□□□□ -0.24
VCX3B-201ENST00000381029 AP1ARQ63HQ0 302 aa13.53□□□□□ -0.24
VCX3B-201ENST00000381029 SAXO2Q658L1 398 aa13.53□□□□□ -0.24
VCX3B-201ENST00000381029 SLC30A6Q6NXT4 461 aa13.53□□□□□ -0.24
VCX3B-201ENST00000381029 APOOLQ6UXV4 268 aa13.53□□□□□ -0.24
VCX3B-201ENST00000381029 WDSUB1Q8N9V3 476 aa13.53□□□□□ -0.24
VCX3B-201ENST00000381029 FBXO30Q8TB52 745 aa13.53□□□□□ -0.24
VCX3B-201ENST00000381029 THOC1Q96FV9 657 aaKnown RBP13.53□□□□□ -0.24
VCX3B-201ENST00000381029 OTUB1Q96FW1 271 aaPredicted RBP13.53□□□□□ -0.24
VCX3B-201ENST00000381029 YIPF4Q9BSR8 244 aa13.53□□□□□ -0.24
VCX3B-201ENST00000381029 DOHHQ9BU89 302 aa13.53□□□□□ -0.24
VCX3B-201ENST00000381029 ACTRT3Q9BYD9 372 aa13.53□□□□□ -0.24
VCX3B-201ENST00000381029 FGFR1OP2Q9NVK5 253 aa13.53□□□□□ -0.24
VCX3B-201ENST00000381029 OR10H1Q9Y4A9 318 aa13.53□□□□□ -0.24
VCX3B-201ENST00000381029 SNX8Q9Y5X2 465 aa13.53□□□□□ -0.24
VCX3B-201ENST00000381029 LIPGQ9Y5X9 500 aa13.53□□□□□ -0.24
VCX3B-201ENST00000381029 COL12A1Q99715 3063 aa13.53□□□□□ -0.24
VCX3B-201ENST00000381029 C17orf51A8MQB3 221 aa13.52□□□□□ -0.25
VCX3B-201ENST00000381029 FAM166BA8MTA8 275 aa13.52□□□□□ -0.25
VCX3B-201ENST00000381029 DYNC1I1O14576 645 aa13.52□□□□□ -0.25
VCX3B-201ENST00000381029 TFECO14948 347 aaPredicted RBP13.52□□□□□ -0.25
VCX3B-201ENST00000381029 SNPHO15079 494 aa13.52□□□□□ -0.25
VCX3B-201ENST00000381029 CFLARO15519 480 aa13.52□□□□□ -0.25
VCX3B-201ENST00000381029 ZNHIT1O43257 154 aa13.52□□□□□ -0.25
VCX3B-201ENST00000381029 IL6P05231 212 aa13.52□□□□□ -0.25
VCX3B-201ENST00000381029 UQCRC2P22695 453 aa13.52□□□□□ -0.25
VCX3B-201ENST00000381029 PRIM2P49643 509 aa13.52□□□□□ -0.25
VCX3B-201ENST00000381029 MVDP53602 400 aa13.52□□□□□ -0.25
VCX3B-201ENST00000381029 TP53BP2Q13625 1128 aa13.52□□□□□ -0.25
VCX3B-201ENST00000381029 RCAN2Q14206 197 aa13.52□□□□□ -0.25
VCX3B-201ENST00000381029 DECR1Q16698 335 aa13.52□□□□□ -0.25
VCX3B-201ENST00000381029 VPS26BQ4G0F5 336 aa13.52□□□□□ -0.25
VCX3B-201ENST00000381029 TIGD3Q6B0B8 471 aa13.52□□□□□ -0.25
VCX3B-201ENST00000381029 BLOC1S3Q6QNY0 202 aa13.52□□□□□ -0.25
VCX3B-201ENST00000381029 GFRALQ6UXV0 394 aa13.52□□□□□ -0.25
VCX3B-201ENST00000381029 MSANTD1Q6ZTZ1 278 aa13.52□□□□□ -0.25
VCX3B-201ENST00000381029 C6orf120Q7Z4R8 191 aa13.52□□□□□ -0.25
VCX3B-201ENST00000381029 SLC22A16Q86VW1 577 aa13.52□□□□□ -0.25
VCX3B-201ENST00000381029 MIER2Q8N344 545 aa13.52□□□□□ -0.25
VCX3B-201ENST00000381029 FAM109AQ8N4B1 249 aa13.52□□□□□ -0.25
VCX3B-201ENST00000381029 OR4A15Q8NGL6 344 aa13.52□□□□□ -0.25
VCX3B-201ENST00000381029 GPR151Q8TDV0 419 aa13.52□□□□□ -0.25
VCX3B-201ENST00000381029 SLC9A6Q92581 669 aa13.52□□□□□ -0.25
VCX3B-201ENST00000381029 CDS1Q92903 461 aa13.52□□□□□ -0.25
VCX3B-201ENST00000381029 TMCO6Q96DC7 493 aa13.52□□□□□ -0.25
VCX3B-201ENST00000381029 NEURL3Q96EH8 262 aa13.52□□□□□ -0.25
VCX3B-201ENST00000381029 RMND5BQ96G75 393 aaPredicted RBP13.52□□□□□ -0.25
VCX3B-201ENST00000381029 ZNF597Q96LX8 424 aa13.52□□□□□ -0.25
VCX3B-201ENST00000381029 PHF12Q96QT6 1004 aa13.52□□□□□ -0.25
VCX3B-201ENST00000381029 OR52E6Q96RD3 313 aa13.52□□□□□ -0.25
VCX3B-201ENST00000381029 SIKE1Q9BRV8 207 aa13.52□□□□□ -0.25
VCX3B-201ENST00000381029 BTBD2Q9BX70 525 aa13.52□□□□□ -0.25
VCX3B-201ENST00000381029 OSBPL11Q9BXB4 747 aa13.52□□□□□ -0.25
VCX3B-201ENST00000381029 NPHS2Q9NP85 383 aa13.52□□□□□ -0.25
VCX3B-201ENST00000381029 TMEM45AQ9NWC5 275 aa13.52□□□□□ -0.25
VCX3B-201ENST00000381029 QPCTLQ9NXS2 382 aa13.52□□□□□ -0.25
VCX3B-201ENST00000381029 DCTN4Q9UJW0 460 aa13.52□□□□□ -0.25
VCX3B-201ENST00000381029 BOKQ9UMX3 212 aaPredicted RBP13.52□□□□□ -0.25
VCX3B-201ENST00000381029 C15orf41Q9Y2V0 281 aa13.52□□□□□ -0.25
VCX3B-201ENST00000381029 NCKAP5O14513 1909 aa13.52□□□□□ -0.25
VCX3B-201ENST00000381029 DNAJC13O75165 2243 aa13.52□□□□□ -0.25
VCX3B-201ENST00000381029 USP9YO00507 2555 aaPredicted RBP13.52□□□□□ -0.25
VCX3B-201ENST00000381029 RNF103-CHMP3A0A140T963 221 aa13.51□□□□□ -0.25
VCX3B-201ENST00000381029 FAM234BA2RU67 622 aa13.51□□□□□ -0.25
VCX3B-201ENST00000381029 PRAMEF27A3QJZ7 478 aa13.51□□□□□ -0.25
VCX3B-201ENST00000381029 WIPF3A6NGB9 483 aa13.51□□□□□ -0.25
VCX3B-201ENST00000381029 CYSRT1A8MQ03 144 aa13.51□□□□□ -0.25
VCX3B-201ENST00000381029 NPIPB9F8W1W9 429 aa13.51□□□□□ -0.25
VCX3B-201ENST00000381029 SEMA7AO75326 666 aa13.51□□□□□ -0.25
VCX3B-201ENST00000381029 CPSF4O95639 269 aaKnown RBP13.51□□□□□ -0.25
VCX3B-201ENST00000381029 NGFRP08138 427 aa13.51□□□□□ -0.25
VCX3B-201ENST00000381029 ALOX5P09917 674 aa13.51□□□□□ -0.25
VCX3B-201ENST00000381029 RNF224P0DH78 156 aa13.51□□□□□ -0.25
VCX3B-201ENST00000381029 ENDOUP21128 410 aaKnown RBP13.51□□□□□ -0.25
VCX3B-201ENST00000381029 IL12BP29460 328 aa13.51□□□□□ -0.25
VCX3B-201ENST00000381029 EVI2BP34910 448 aa13.51□□□□□ -0.25
VCX3B-201ENST00000381029 POLR2JP52435 117 aaKnown RBP13.51□□□□□ -0.25
VCX3B-201ENST00000381029 RPS26P62854 115 aaKnown RBP13.51□□□□□ -0.25
VCX3B-201ENST00000381029 RPP38P78345 283 aaKnown RBP13.51□□□□□ -0.25
VCX3B-201ENST00000381029 IRX1P78414 480 aaPredicted RBP13.51□□□□□ -0.25
VCX3B-201ENST00000381029 HEPHL1Q6MZM0 1159 aa13.51□□□□□ -0.25
VCX3B-201ENST00000381029 SZRD1Q7Z422 152 aa13.51□□□□□ -0.25
VCX3B-201ENST00000381029 GHDCQ8N2G8 530 aa13.51□□□□□ -0.25
VCX3B-201ENST00000381029 CHDHQ8NE62 594 aaPredicted RBP13.51□□□□□ -0.25
VCX3B-201ENST00000381029 VPS37AQ8NEZ2 397 aa13.51□□□□□ -0.25
VCX3B-201ENST00000381029 OR4C3Q8NH37 302 aa13.51□□□□□ -0.25
VCX3B-201ENST00000381029 GTF2H4Q92759 462 aa13.51□□□□□ -0.25
VCX3B-201ENST00000381029 VPS33AQ96AX1 596 aa13.51□□□□□ -0.25
VCX3B-201ENST00000381029 GNRHR2Q96P88 292 aa13.51□□□□□ -0.25
VCX3B-201ENST00000381029 OR7D2Q96RA2 312 aa13.51□□□□□ -0.25
VCX3B-201ENST00000381029 ZBTB18Q99592 522 aa13.51□□□□□ -0.25
VCX3B-201ENST00000381029 DEFB127Q9H1M4 99 aa13.51□□□□□ -0.25
VCX3B-201ENST00000381029 METTL7AQ9H8H3 244 aa13.51□□□□□ -0.25
VCX3B-201ENST00000381029 ACKR4Q9NPB9 350 aa13.51□□□□□ -0.25
VCX3B-201ENST00000381029 ABCG2Q9UNQ0 655 aa13.51□□□□□ -0.25
VCX3B-201ENST00000381029 WIF1Q9Y5W5 379 aa13.51□□□□□ -0.25
VCX3B-201ENST00000381029 SPTAN1Q13813 2472 aaKnown RBP13.51□□□□□ -0.25
VCX3B-201ENST00000381029 PTPN13Q12923 2485 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms