RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 HRO43593 1189 aa17.92■□□□□ 0.46
GMDS-201ENST00000380805 BCAS1O75363 584 aaPredicted RBP17.92■□□□□ 0.46
GMDS-201ENST00000380805 DBIP07108 87 aaKnown RBP17.92■□□□□ 0.46
GMDS-201ENST00000380805 IFNA8P32881 189 aa17.92■□□□□ 0.46
GMDS-201ENST00000380805 IFNGR2P38484 337 aa17.92■□□□□ 0.46
GMDS-201ENST00000380805 RGS8P57771 180 aaPredicted RBP17.92■□□□□ 0.46
GMDS-201ENST00000380805 AQP6Q13520 282 aa17.92■□□□□ 0.46
GMDS-201ENST00000380805 SLC25A30Q5SVS4 291 aa17.92■□□□□ 0.46
GMDS-201ENST00000380805 PTCHD4Q6ZW05 846 aa17.92■□□□□ 0.46
GMDS-201ENST00000380805 ZNF595Q8IYB9 648 aa17.92■□□□□ 0.46
GMDS-201ENST00000380805 VWA5B2Q8N398 1253 aa17.92■□□□□ 0.46
GMDS-201ENST00000380805 GAB3Q8WWW8 586 aa17.92■□□□□ 0.46
GMDS-201ENST00000380805 DUSP15Q9H1R2 295 aaPredicted RBP17.92■□□□□ 0.46
GMDS-201ENST00000380805 EVA1AQ9H8M9 152 aa17.92■□□□□ 0.46
GMDS-201ENST00000380805 CACYBPQ9HB71 228 aaKnown RBP17.92■□□□□ 0.46
GMDS-201ENST00000380805 SEMA4GQ9NTN9 838 aa17.92■□□□□ 0.46
GMDS-201ENST00000380805 CLN6Q9NWW5 311 aa17.92■□□□□ 0.46
GMDS-201ENST00000380805 CLCA2Q9UQC9 943 aa17.92■□□□□ 0.46
GMDS-201ENST00000380805 MRPS33Q9Y291 106 aaKnown RBP17.92■□□□□ 0.46
GMDS-201ENST00000380805 A0A0A6YYC8 382 aaPredicted RBP17.91■□□□□ 0.46
GMDS-201ENST00000380805 HYKKA2RU49 373 aa17.91■□□□□ 0.46
GMDS-201ENST00000380805 I3L1I5 382 aaPredicted RBP17.91■□□□□ 0.46
GMDS-201ENST00000380805 AP3D1O14617 1153 aa17.91■□□□□ 0.46
GMDS-201ENST00000380805 CTNSO60931 367 aa17.91■□□□□ 0.46
GMDS-201ENST00000380805 S1PR1P21453 382 aa17.91■□□□□ 0.46
GMDS-201ENST00000380805 BCKDHBP21953 392 aa17.91■□□□□ 0.46
GMDS-201ENST00000380805 C21orf33P30042 268 aaPredicted RBP17.91■□□□□ 0.46
GMDS-201ENST00000380805 TRHRP34981 398 aaPredicted RBP17.91■□□□□ 0.46
GMDS-201ENST00000380805 DECR1Q16698 335 aa17.91■□□□□ 0.46
GMDS-201ENST00000380805 DEFB133Q30KQ1 61 aa17.91■□□□□ 0.46
GMDS-201ENST00000380805 TCTE1Q5JU00 501 aa17.91■□□□□ 0.46
GMDS-201ENST00000380805 MRGPREQ86SM8 312 aa17.91■□□□□ 0.46
GMDS-201ENST00000380805 OR8J1Q8NGP2 316 aa17.91■□□□□ 0.46
GMDS-201ENST00000380805 C9orf43Q8TAL5 461 aaPredicted RBP17.91■□□□□ 0.46
GMDS-201ENST00000380805 GPA33Q99795 319 aa17.91■□□□□ 0.46
GMDS-201ENST00000380805 LMF2Q9BU23 707 aaKnown RBP17.91■□□□□ 0.46
GMDS-201ENST00000380805 CDCA4Q9BXL8 241 aa17.91■□□□□ 0.46
GMDS-201ENST00000380805 NECTIN3Q9NQS3 549 aa17.91■□□□□ 0.46
GMDS-201ENST00000380805 GPR83Q9NYM4 423 aa17.91■□□□□ 0.46
GMDS-201ENST00000380805 CLDN16Q9Y5I7 305 aa17.91■□□□□ 0.46
GMDS-201ENST00000380805 SPAG17Q6Q759 2223 aa17.91■□□□□ 0.46
GMDS-201ENST00000380805 DNAH14Q0VDD8 3507 aa17.91■□□□□ 0.46
GMDS-201ENST00000380805 ZDBF2Q9HCK1 2354 aa17.9■□□□□ 0.46
GMDS-201ENST00000380805 ABCA7Q8IZY2 2146 aa17.9■□□□□ 0.46
GMDS-201ENST00000380805 FAM86C2PA6NEL3 165 aa17.9■□□□□ 0.46
GMDS-201ENST00000380805 CLDN24A6NM45 220 aa17.9■□□□□ 0.46
GMDS-201ENST00000380805 M0R129 80 aa17.9■□□□□ 0.46
GMDS-201ENST00000380805 FRS3O43559 492 aa17.9■□□□□ 0.46
GMDS-201ENST00000380805 SOX14O95416 240 aa17.9■□□□□ 0.46
GMDS-201ENST00000380805 CCNYL3P0C7X3 344 aa17.9■□□□□ 0.46
GMDS-201ENST00000380805 NID1P14543 1247 aa17.9■□□□□ 0.46
GMDS-201ENST00000380805 POU1F1P28069 291 aa17.9■□□□□ 0.46
GMDS-201ENST00000380805 ALDH4A1P30038 563 aa17.9■□□□□ 0.46
GMDS-201ENST00000380805 TGFBR2P37173 567 aa17.9■□□□□ 0.46
GMDS-201ENST00000380805 ZNF136P52737 540 aa17.9■□□□□ 0.46
GMDS-201ENST00000380805 CDK5Q00535 292 aa17.9■□□□□ 0.46
GMDS-201ENST00000380805 OCLNQ16625 522 aa17.9■□□□□ 0.46
GMDS-201ENST00000380805 CCDC81Q6ZN84 652 aa17.9■□□□□ 0.46
GMDS-201ENST00000380805 DGAT2L6Q6ZPD8 337 aa17.9■□□□□ 0.46
GMDS-201ENST00000380805 MED25Q71SY5 747 aa17.9■□□□□ 0.46
GMDS-201ENST00000380805 COX18Q8N8Q8 333 aa17.9■□□□□ 0.46
GMDS-201ENST00000380805 B3GNT7Q8NFL0 401 aa17.9■□□□□ 0.46
GMDS-201ENST00000380805 GNPDA2Q8TDQ7 276 aa17.9■□□□□ 0.46
GMDS-201ENST00000380805 ACOT11Q8WXI4 607 aaPredicted RBP17.9■□□□□ 0.46
GMDS-201ENST00000380805 FGF11Q92914 225 aa17.9■□□□□ 0.46
GMDS-201ENST00000380805 Q96MT0 163 aa17.9■□□□□ 0.46
GMDS-201ENST00000380805 IER2Q9BTL4 223 aa17.9■□□□□ 0.46
GMDS-201ENST00000380805 ITPAQ9BY32 194 aa17.9■□□□□ 0.46
GMDS-201ENST00000380805 POLDIP3Q9BY77 421 aaKnown RBP17.9■□□□□ 0.46
GMDS-201ENST00000380805 C11orf16Q9NQ32 467 aa17.9■□□□□ 0.46
GMDS-201ENST00000380805 HEMK1Q9Y5R4 338 aaPredicted RBP17.9■□□□□ 0.46
GMDS-201ENST00000380805 GON4LQ3T8J9 2241 aa17.9■□□□□ 0.46
GMDS-201ENST00000380805 H3BN98 237 aa17.89■□□□□ 0.46
GMDS-201ENST00000380805 TGFBR3LH3BV60 316 aa17.89■□□□□ 0.46
GMDS-201ENST00000380805 SLC22A1O15245 554 aa17.89■□□□□ 0.46
GMDS-201ENST00000380805 BRINP1O60477 761 aa17.89■□□□□ 0.46
GMDS-201ENST00000380805 FMO6PO60774 539 aa17.89■□□□□ 0.46
GMDS-201ENST00000380805 ZBTB11O95625 1053 aaPredicted RBP17.89■□□□□ 0.46
GMDS-201ENST00000380805 THY1P04216 161 aa17.89■□□□□ 0.46
GMDS-201ENST00000380805 LCKP06239 509 aa17.89■□□□□ 0.46
GMDS-201ENST00000380805 IGFBP1P08833 259 aaPredicted RBP17.89■□□□□ 0.46
GMDS-201ENST00000380805 ZNF182P17025 639 aaPredicted RBP17.89■□□□□ 0.46
GMDS-201ENST00000380805 PSMB9P28065 219 aa17.89■□□□□ 0.46
GMDS-201ENST00000380805 MLLT3P42568 568 aaPredicted RBP17.89■□□□□ 0.46
GMDS-201ENST00000380805 AVPR1BP47901 424 aa17.89■□□□□ 0.46
GMDS-201ENST00000380805 FNTBP49356 437 aa17.89■□□□□ 0.46
GMDS-201ENST00000380805 NUDT6P53370 316 aa17.89■□□□□ 0.46
GMDS-201ENST00000380805 GFERP55789 205 aa17.89■□□□□ 0.46
GMDS-201ENST00000380805 LSM11P83369 360 aaKnown RBP eCLIP17.89■□□□□ 0.46
GMDS-201ENST00000380805 EFNB1P98172 346 aa17.89■□□□□ 0.46
GMDS-201ENST00000380805 TSPAN31Q12999 210 aa17.89■□□□□ 0.46
GMDS-201ENST00000380805 EXOSC7Q15024 291 aaKnown RBP17.89■□□□□ 0.46
GMDS-201ENST00000380805 P2RY8Q86VZ1 359 aa17.89■□□□□ 0.46
GMDS-201ENST00000380805 GALNT12Q8IXK2 581 aa17.89■□□□□ 0.46
GMDS-201ENST00000380805 TBC1D15Q8TC07 691 aa17.89■□□□□ 0.46
GMDS-201ENST00000380805 ZDHHC12Q96GR4 267 aa17.89■□□□□ 0.46
GMDS-201ENST00000380805 MCHR1Q99705 422 aa17.89■□□□□ 0.46
GMDS-201ENST00000380805 ERVMER34-1Q9H9K5 563 aa17.89■□□□□ 0.46
GMDS-201ENST00000380805 PDE7BQ9NP56 450 aa17.89■□□□□ 0.46
GMDS-201ENST00000380805 AMBNQ9NP70 447 aa17.89■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms