RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 TRMT10CQ7L0Y3 403 aaKnown RBP15.25■□□□□ 0.03
SMN2-201ENST00000380741 FADS6Q8N9I5 356 aa15.25■□□□□ 0.03
SMN2-201ENST00000380741 ACMSDQ8TDX5 336 aa15.25■□□□□ 0.03
SMN2-201ENST00000380741 DSN1Q9H410 356 aa15.25■□□□□ 0.03
SMN2-201ENST00000380741 GSX1Q9H4S2 264 aaPredicted RBP15.25■□□□□ 0.03
SMN2-201ENST00000380741 MID1IP1Q9NPA3 183 aa15.25■□□□□ 0.03
SMN2-201ENST00000380741 A0A087WV62 115 aa15.24■□□□□ 0.03
SMN2-201ENST00000380741 COQ9O75208 318 aa15.24■□□□□ 0.03
SMN2-201ENST00000380741 GSTA1P08263 222 aa15.24■□□□□ 0.03
SMN2-201ENST00000380741 DIO3P55073 304 aa15.24■□□□□ 0.03
SMN2-201ENST00000380741 EEF1A1P68104 462 aaKnown RBP15.24■□□□□ 0.03
SMN2-201ENST00000380741 BCL2A1Q16548 175 aa15.24■□□□□ 0.03
SMN2-201ENST00000380741 EEF1A1P5Q5VTE0 462 aa15.24■□□□□ 0.03
SMN2-201ENST00000380741 FAM71E1Q6IPT2 247 aa15.24■□□□□ 0.03
SMN2-201ENST00000380741 P4HA3Q7Z4N8 544 aa15.24■□□□□ 0.03
SMN2-201ENST00000380741 UBQLNLQ8IYU4 475 aa15.24■□□□□ 0.03
SMN2-201ENST00000380741 CCNYL1Q8N7R7 359 aa15.24■□□□□ 0.03
SMN2-201ENST00000380741 WFDC11Q8NEX6 87 aa15.24■□□□□ 0.03
SMN2-201ENST00000380741 OR2M3Q8NG83 312 aa15.24■□□□□ 0.03
SMN2-201ENST00000380741 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.24■□□□□ 0.03
SMN2-201ENST00000380741 MZB1Q8WU39 189 aa15.24■□□□□ 0.03
SMN2-201ENST00000380741 MIEF1Q9NQG6 463 aa15.24■□□□□ 0.03
SMN2-201ENST00000380741 FLRT3Q9NZU0 649 aa15.24■□□□□ 0.03
SMN2-201ENST00000380741 PSMC3IPQ9P2W1 217 aaPredicted RBP15.24■□□□□ 0.03
SMN2-201ENST00000380741 EMCNQ9ULC0 261 aa15.24■□□□□ 0.03
SMN2-201ENST00000380741 C19orf53Q9UNZ5 99 aaPredicted RBP15.24■□□□□ 0.03
SMN2-201ENST00000380741 SLC22A20A6NK97 555 aa15.23■□□□□ 0.03
SMN2-201ENST00000380741 G3V2L1 256 aa15.23■□□□□ 0.03
SMN2-201ENST00000380741 FADS1O60427 444 aa15.23■□□□□ 0.03
SMN2-201ENST00000380741 SLITRK5O94991 958 aa15.23■□□□□ 0.03
SMN2-201ENST00000380741 PEPDP12955 493 aa15.23■□□□□ 0.03
SMN2-201ENST00000380741 HOXB4P17483 251 aaPredicted RBP15.23■□□□□ 0.03
SMN2-201ENST00000380741 STX5Q13190 355 aa15.23■□□□□ 0.03
SMN2-201ENST00000380741 CYP27C1Q4G0S4 372 aa15.23■□□□□ 0.03
SMN2-201ENST00000380741 RAET1LQ5VY80 246 aa15.23■□□□□ 0.03
SMN2-201ENST00000380741 SMPDL3BQ92485 455 aa15.23■□□□□ 0.03
SMN2-201ENST00000380741 STARD4Q96DR4 205 aa15.23■□□□□ 0.03
SMN2-201ENST00000380741 RTN4RQ9BZR6 473 aa15.23■□□□□ 0.03
SMN2-201ENST00000380741 GLIPR2Q9H4G4 154 aa15.23■□□□□ 0.03
SMN2-201ENST00000380741 MYNNQ9NPC7 610 aa15.23■□□□□ 0.03
SMN2-201ENST00000380741 TAS2R7Q9NYW3 318 aa15.23■□□□□ 0.03
SMN2-201ENST00000380741 MED11Q9P086 117 aa15.23■□□□□ 0.03
SMN2-201ENST00000380741 TBK1Q9UHD2 729 aa15.23■□□□□ 0.03
SMN2-201ENST00000380741 GRID1Q9ULK0 1009 aa15.23■□□□□ 0.03
SMN2-201ENST00000380741 ABCG2Q9UNQ0 655 aa15.23■□□□□ 0.03
SMN2-201ENST00000380741 TESMINQ9Y4I5 508 aa15.23■□□□□ 0.03
SMN2-201ENST00000380741 POLR3HQ9Y535 204 aaPredicted RBP15.23■□□□□ 0.03
SMN2-201ENST00000380741 H0YC42 278 aa15.22■□□□□ 0.03
SMN2-201ENST00000380741 UPK1AO00322 258 aa15.22■□□□□ 0.03
SMN2-201ENST00000380741 MSTNO14793 375 aa15.22■□□□□ 0.03
SMN2-201ENST00000380741 SMNDC1O75940 238 aaKnown RBP eCLIP15.22■□□□□ 0.03
SMN2-201ENST00000380741 PSMG1O95456 288 aa15.22■□□□□ 0.03
SMN2-201ENST00000380741 CRHP06850 196 aa15.22■□□□□ 0.03
SMN2-201ENST00000380741 FAM153BP0C7A2 387 aa15.22■□□□□ 0.03
SMN2-201ENST00000380741 MYL2P10916 166 aa15.22■□□□□ 0.03
SMN2-201ENST00000380741 FOSL1P15407 271 aa15.22■□□□□ 0.03
SMN2-201ENST00000380741 HK1P19367 917 aa15.22■□□□□ 0.03
SMN2-201ENST00000380741 CD53P19397 219 aa15.22■□□□□ 0.03
SMN2-201ENST00000380741 NTSP30990 170 aa15.22■□□□□ 0.03
SMN2-201ENST00000380741 TPD52P55327 224 aaPredicted RBP15.22■□□□□ 0.03
SMN2-201ENST00000380741 CLDN15P56746 228 aa15.22■□□□□ 0.03
SMN2-201ENST00000380741 FAM27E3Q08E93 113 aa15.22■□□□□ 0.03
SMN2-201ENST00000380741 SLC29A2Q14542 456 aa15.22■□□□□ 0.03
SMN2-201ENST00000380741 DECR1Q16698 335 aa15.22■□□□□ 0.03
SMN2-201ENST00000380741 IMPG1Q17R60 797 aa15.22■□□□□ 0.03
SMN2-201ENST00000380741 FAM153CQ494X1 144 aa15.22■□□□□ 0.03
SMN2-201ENST00000380741 OR2A2Q6IF42 318 aa15.22■□□□□ 0.03
SMN2-201ENST00000380741 VWA1Q6PCB0 445 aa15.22■□□□□ 0.03
SMN2-201ENST00000380741 CHMP1BQ7LBR1 199 aa15.22■□□□□ 0.03
SMN2-201ENST00000380741 OR2L13Q8N349 312 aa15.22■□□□□ 0.03
SMN2-201ENST00000380741 CNEP1R1Q8N9A8 125 aa15.22■□□□□ 0.03
SMN2-201ENST00000380741 FIG4Q92562 907 aa15.22■□□□□ 0.03
SMN2-201ENST00000380741 DDX18Q9NVP1 670 aaKnown RBP15.22■□□□□ 0.03
SMN2-201ENST00000380741 NDRG3Q9UGV2 375 aa15.22■□□□□ 0.03
SMN2-201ENST00000380741 DCDC2Q9UHG0 476 aa15.22■□□□□ 0.03
SMN2-201ENST00000380741 CASKO14936 926 aa15.21■□□□□ 0.03
SMN2-201ENST00000380741 SEC14L5O43304 696 aa15.21■□□□□ 0.03
SMN2-201ENST00000380741 SUCLG1P53597 346 aaKnown RBP15.21■□□□□ 0.03
SMN2-201ENST00000380741 GANABQ14697 944 aaKnown RBP15.21■□□□□ 0.03
SMN2-201ENST00000380741 ZYG11AQ6WRX3 759 aa15.21■□□□□ 0.03
SMN2-201ENST00000380741 FRMD7Q6ZUT3 714 aa15.21■□□□□ 0.03
SMN2-201ENST00000380741 TRIM46Q7Z4K8 759 aa15.21■□□□□ 0.03
SMN2-201ENST00000380741 KRTAP1-3Q8IUG1 177 aa15.21■□□□□ 0.03
SMN2-201ENST00000380741 IFT20Q8IY31 132 aa15.21■□□□□ 0.03
SMN2-201ENST00000380741 MEIOBQ8N635 442 aa15.21■□□□□ 0.03
SMN2-201ENST00000380741 OR5M1Q8NGP8 315 aa15.21■□□□□ 0.03
SMN2-201ENST00000380741 ELP4Q96EB1 424 aa15.21■□□□□ 0.03
SMN2-201ENST00000380741 CCDC126Q96EE4 140 aa15.21■□□□□ 0.03
SMN2-201ENST00000380741 AMDHD1Q96NU7 426 aa15.21■□□□□ 0.03
SMN2-201ENST00000380741 TXLNGYQ9BZA5 131 aa15.21■□□□□ 0.03
SMN2-201ENST00000380741 NEUROD4Q9HD90 331 aa15.21■□□□□ 0.03
SMN2-201ENST00000380741 Q9N2J8 555 aa15.21■□□□□ 0.03
SMN2-201ENST00000380741 TNFRSF12AQ9NP84 129 aa15.21■□□□□ 0.03
SMN2-201ENST00000380741 SDHAF3Q9NRP4 125 aa15.21■□□□□ 0.03
SMN2-201ENST00000380741 FAM120CQ9NX05 1096 aaKnown RBP15.21■□□□□ 0.03
SMN2-201ENST00000380741 ZNF337Q9Y3M9 751 aa15.21■□□□□ 0.03
SMN2-201ENST00000380741 A0A1W2PPM1 405 aa15.2■□□□□ 0.02
SMN2-201ENST00000380741 OR2M5A3KFT3 312 aa15.2■□□□□ 0.02
SMN2-201ENST00000380741 H3BML4 177 aa15.2■□□□□ 0.02
SMN2-201ENST00000380741 SIAH2O43255 324 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms