RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 WSB2Q9NYS7 404 aaPredicted RBP11.8□□□□□ -0.52
VPS16-202ENST00000380445 TVP23BQ9NYZ1 205 aa11.8□□□□□ -0.52
VPS16-202ENST00000380445 A0A087WUU8 490 aa11.79□□□□□ -0.52
VPS16-202ENST00000380445 SNTNA6NMZ2 147 aa11.79□□□□□ -0.52
VPS16-202ENST00000380445 TP53P04637 393 aaPredicted RBP11.79□□□□□ -0.52
VPS16-202ENST00000380445 HSMCR30P0CW71 290 aa11.79□□□□□ -0.52
VPS16-202ENST00000380445 RHAGQ02094 409 aa11.79□□□□□ -0.52
VPS16-202ENST00000380445 FZD2Q14332 565 aa11.79□□□□□ -0.52
VPS16-202ENST00000380445 GINS1Q14691 196 aa11.79□□□□□ -0.52
VPS16-202ENST00000380445 FRRS1Q6ZNA5 592 aa11.79□□□□□ -0.52
VPS16-202ENST00000380445 CSNK1A1LQ8N752 337 aa11.79□□□□□ -0.52
VPS16-202ENST00000380445 TEX47Q8TBZ9 253 aa11.79□□□□□ -0.52
VPS16-202ENST00000380445 ZG16BQ96DA0 208 aa11.79□□□□□ -0.52
VPS16-202ENST00000380445 KLHDC7BQ96G42 594 aa11.79□□□□□ -0.52
VPS16-202ENST00000380445 MGLLQ99685 303 aa11.79□□□□□ -0.52
VPS16-202ENST00000380445 GPR174Q9BXC1 333 aa11.79□□□□□ -0.52
VPS16-202ENST00000380445 SLIRPQ9GZT3 109 aaKnown RBP11.79□□□□□ -0.52
VPS16-202ENST00000380445 TCEAL2Q9H3H9 227 aaPredicted RBP11.79□□□□□ -0.52
VPS16-202ENST00000380445 CTPS2Q9NRF8 586 aa11.79□□□□□ -0.52
VPS16-202ENST00000380445 GPR27Q9NS67 375 aa11.79□□□□□ -0.52
VPS16-202ENST00000380445 SCN3AQ9NY46 2000 aa11.79□□□□□ -0.52
VPS16-202ENST00000380445 A0A1W2PPC4 97 aa11.79□□□□□ -0.52
VPS16-202ENST00000380445 OR5K3A6NET4 321 aa11.79□□□□□ -0.52
VPS16-202ENST00000380445 SHISA7A6NL88 538 aa11.79□□□□□ -0.52
VPS16-202ENST00000380445 PLOD3O60568 738 aa11.79□□□□□ -0.52
VPS16-202ENST00000380445 FCMRO60667 390 aa11.79□□□□□ -0.52
VPS16-202ENST00000380445 GALR3O60755 368 aaPredicted RBP11.79□□□□□ -0.52
VPS16-202ENST00000380445 SOX30O94993 753 aa11.79□□□□□ -0.52
VPS16-202ENST00000380445 GPR75O95800 540 aa11.79□□□□□ -0.52
VPS16-202ENST00000380445 IGFBP1P08833 259 aaPredicted RBP11.79□□□□□ -0.52
VPS16-202ENST00000380445 ALOX5P09917 674 aa11.79□□□□□ -0.52
VPS16-202ENST00000380445 PVRP15151 417 aa11.79□□□□□ -0.52
VPS16-202ENST00000380445 GADD45AP24522 165 aa11.79□□□□□ -0.52
VPS16-202ENST00000380445 AVPR1BP47901 424 aa11.79□□□□□ -0.52
VPS16-202ENST00000380445 CDK5Q00535 292 aa11.79□□□□□ -0.52
VPS16-202ENST00000380445 TSPAN31Q12999 210 aa11.79□□□□□ -0.52
VPS16-202ENST00000380445 DUSP8Q13202 625 aa11.79□□□□□ -0.52
VPS16-202ENST00000380445 ZNF628Q5EBL2 1059 aa11.79□□□□□ -0.52
VPS16-202ENST00000380445 RNLSQ5VYX0 342 aa11.79□□□□□ -0.52
VPS16-202ENST00000380445 SYT13Q7L8C5 426 aa11.79□□□□□ -0.52
VPS16-202ENST00000380445 AVL9Q8NBF6 648 aa11.79□□□□□ -0.52
VPS16-202ENST00000380445 PIGXQ8TBF5 258 aa11.79□□□□□ -0.52
VPS16-202ENST00000380445 DIO2Q92813 273 aa11.79□□□□□ -0.52
VPS16-202ENST00000380445 TEX12Q9BXU0 123 aa11.79□□□□□ -0.52
VPS16-202ENST00000380445 SLC7A5P2Q9GIP4 190 aa11.79□□□□□ -0.52
VPS16-202ENST00000380445 MMP27Q9H306 513 aa11.79□□□□□ -0.52
VPS16-202ENST00000380445 KRCC1Q9NPI7 259 aaPredicted RBP11.79□□□□□ -0.52
VPS16-202ENST00000380445 DNAJC27Q9NZQ0 273 aa11.79□□□□□ -0.52
VPS16-202ENST00000380445 MKLN1Q9UL63 735 aa11.79□□□□□ -0.52
VPS16-202ENST00000380445 ZNF443Q9Y2A4 671 aaPredicted RBP11.79□□□□□ -0.52
VPS16-202ENST00000380445 A3GALT2U3KPV4 340 aa11.79□□□□□ -0.52
VPS16-202ENST00000380445 CPSF4LA6NMK7 179 aaKnown RBP11.79□□□□□ -0.52
VPS16-202ENST00000380445 FAM170BA6NMN3 283 aa11.79□□□□□ -0.52
VPS16-202ENST00000380445 CCRL2O00421 344 aa11.79□□□□□ -0.52
VPS16-202ENST00000380445 OR5F1O95221 314 aa11.79□□□□□ -0.52
VPS16-202ENST00000380445 AK1P00568 194 aa11.79□□□□□ -0.52
VPS16-202ENST00000380445 THBS1P07996 1170 aa11.79□□□□□ -0.52
VPS16-202ENST00000380445 CHRNB1P11230 501 aa11.79□□□□□ -0.52
VPS16-202ENST00000380445 BMP8BP34820 402 aa11.79□□□□□ -0.52
VPS16-202ENST00000380445 LSSP48449 732 aa11.79□□□□□ -0.52
VPS16-202ENST00000380445 OXA1LQ15070 435 aa11.79□□□□□ -0.52
VPS16-202ENST00000380445 DECR1Q16698 335 aa11.79□□□□□ -0.52
VPS16-202ENST00000380445 SLC27A4Q6P1M0 643 aa11.79□□□□□ -0.52
VPS16-202ENST00000380445 PLEKHM3Q6ZWE6 761 aa11.79□□□□□ -0.52
VPS16-202ENST00000380445 PARGQ86W56 976 aa11.79□□□□□ -0.52
VPS16-202ENST00000380445 CDRT4Q8N9R6 151 aa11.79□□□□□ -0.52
VPS16-202ENST00000380445 OR7G1Q8NGA0 311 aa11.79□□□□□ -0.52
VPS16-202ENST00000380445 ACOT11Q8WXI4 607 aaPredicted RBP11.79□□□□□ -0.52
VPS16-202ENST00000380445 PMM1Q92871 262 aa11.79□□□□□ -0.52
VPS16-202ENST00000380445 STACQ99469 402 aa11.79□□□□□ -0.52
VPS16-202ENST00000380445 SEMA6CQ9H3T2 930 aa11.79□□□□□ -0.52
VPS16-202ENST00000380445 IL21RQ9HBE5 538 aa11.79□□□□□ -0.52
VPS16-202ENST00000380445 DUSP22Q9NRW4 184 aa11.79□□□□□ -0.52
VPS16-202ENST00000380445 EVA1BQ9NVM1 165 aa11.79□□□□□ -0.52
VPS16-202ENST00000380445 QPCTLQ9NXS2 382 aa11.79□□□□□ -0.52
VPS16-202ENST00000380445 SATB2Q9UPW6 733 aa11.79□□□□□ -0.52
VPS16-202ENST00000380445 CLCA2Q9UQC9 943 aa11.79□□□□□ -0.52
VPS16-202ENST00000380445 PMF1-BGLAPU3KQ54 211 aa11.79□□□□□ -0.52
VPS16-202ENST00000380445 ARHGEF17Q96PE2 2063 aaPredicted RBP11.78□□□□□ -0.52
VPS16-202ENST00000380445 IRGMA1A4Y4 181 aa11.78□□□□□ -0.52
VPS16-202ENST00000380445 ZNF860A6NHJ4 632 aa11.78□□□□□ -0.52
VPS16-202ENST00000380445 TLX2O43763 284 aaPredicted RBP11.78□□□□□ -0.52
VPS16-202ENST00000380445 ZNF217O75362 1048 aa11.78□□□□□ -0.52
VPS16-202ENST00000380445 DBTP11182 482 aaKnown RBP11.78□□□□□ -0.52
VPS16-202ENST00000380445 SNRPNP63162 240 aaKnown RBP11.78□□□□□ -0.52
VPS16-202ENST00000380445 SKP1P63208 163 aa11.78□□□□□ -0.52
VPS16-202ENST00000380445 DUSP5Q16690 384 aa11.78□□□□□ -0.52
VPS16-202ENST00000380445 ZNF542PQ5EBM4 170 aa11.78□□□□□ -0.52
VPS16-202ENST00000380445 TYW3Q6IPR3 259 aaKnown RBP11.78□□□□□ -0.52
VPS16-202ENST00000380445 RASSF6Q6ZTQ3 369 aa11.78□□□□□ -0.52
VPS16-202ENST00000380445 WDR53Q7Z5U6 358 aaPredicted RBP11.78□□□□□ -0.52
VPS16-202ENST00000380445 MCFD2Q8NI22 146 aa11.78□□□□□ -0.52
VPS16-202ENST00000380445 ZDHHC1Q8WTX9 485 aa11.78□□□□□ -0.52
VPS16-202ENST00000380445 SLC38A2Q96QD8 506 aa11.78□□□□□ -0.52
VPS16-202ENST00000380445 SDF2Q99470 211 aa11.78□□□□□ -0.52
VPS16-202ENST00000380445 MCHR1Q99705 422 aa11.78□□□□□ -0.52
VPS16-202ENST00000380445 MND1Q9BWT6 205 aa11.78□□□□□ -0.52
VPS16-202ENST00000380445 TSSK6Q9BXA6 273 aa11.78□□□□□ -0.52
VPS16-202ENST00000380445 POLR2J2Q9GZM3 115 aaKnown RBP11.78□□□□□ -0.52
VPS16-202ENST00000380445 ZBTB20Q9HC78 741 aaPredicted RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms