RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 DGUOKQ16854 277 aa6.15□□□□□ -1.43
NEDD9-202ENST00000379446 ZNF750Q32MQ0 723 aa6.15□□□□□ -1.43
NEDD9-202ENST00000379446 PYCR3Q53H96 274 aa6.15□□□□□ -1.43
NEDD9-202ENST00000379446 UNC50Q53HI1 259 aa6.15□□□□□ -1.43
NEDD9-202ENST00000379446 ZNF678Q5SXM1 525 aa6.15□□□□□ -1.43
NEDD9-202ENST00000379446 ARMC4Q5T2S8 1044 aa6.15□□□□□ -1.43
NEDD9-202ENST00000379446 ZCCHC12Q6PEW1 402 aa6.15□□□□□ -1.43
NEDD9-202ENST00000379446 FIP1L1Q6UN15 594 aaKnown RBP6.15□□□□□ -1.43
NEDD9-202ENST00000379446 KRT77Q7Z794 578 aa6.15□□□□□ -1.43
NEDD9-202ENST00000379446 CADM3Q8N126 398 aa6.15□□□□□ -1.43
NEDD9-202ENST00000379446 LRRC25Q8N386 305 aaPredicted RBP6.15□□□□□ -1.43
NEDD9-202ENST00000379446 ZNF808Q8N4W9 903 aaPredicted RBP6.15□□□□□ -1.43
NEDD9-202ENST00000379446 MCFD2Q8NI22 146 aa6.15□□□□□ -1.43
NEDD9-202ENST00000379446 TBC1D15Q8TC07 691 aa6.15□□□□□ -1.43
NEDD9-202ENST00000379446 SPRYD4Q8WW59 207 aaPredicted RBP6.15□□□□□ -1.43
NEDD9-202ENST00000379446 GATAD2BQ8WXI9 593 aa6.15□□□□□ -1.43
NEDD9-202ENST00000379446 FATE1Q969F0 183 aa6.15□□□□□ -1.43
NEDD9-202ENST00000379446 SERHLQ9NQF3 203 aa6.15□□□□□ -1.43
NEDD9-202ENST00000379446 DNAJB11Q9UBS4 358 aa6.15□□□□□ -1.43
NEDD9-202ENST00000379446 DOCK8Q8NF50 2099 aa6.15□□□□□ -1.43
NEDD9-202ENST00000379446 COL11A1P12107 1806 aaPredicted RBP6.15□□□□□ -1.43
NEDD9-202ENST00000379446 PRSS51A0A1B0GVH4 220 aa6.15□□□□□ -1.43
NEDD9-202ENST00000379446 PRAMEF2O60811 474 aa6.15□□□□□ -1.43
NEDD9-202ENST00000379446 ENDOUP21128 410 aaKnown RBP6.15□□□□□ -1.43
NEDD9-202ENST00000379446 PTNP21246 168 aa6.15□□□□□ -1.43
NEDD9-202ENST00000379446 CERS1P27544 350 aa6.15□□□□□ -1.43
NEDD9-202ENST00000379446 PGFP49763 221 aa6.15□□□□□ -1.43
NEDD9-202ENST00000379446 CRISP3P54108 245 aa6.15□□□□□ -1.43
NEDD9-202ENST00000379446 DEFA1P59665 94 aa6.15□□□□□ -1.43
NEDD9-202ENST00000379446 DEFA3P59666 94 aa6.15□□□□□ -1.43
NEDD9-202ENST00000379446 UFM1P61960 85 aa6.15□□□□□ -1.43
NEDD9-202ENST00000379446 CDC20Q12834 499 aa6.15□□□□□ -1.43
NEDD9-202ENST00000379446 SCGB2A2Q13296 93 aa6.15□□□□□ -1.43
NEDD9-202ENST00000379446 SP140Q13342 867 aa6.15□□□□□ -1.43
NEDD9-202ENST00000379446 RUNDC3AQ59EK9 446 aa6.15□□□□□ -1.43
NEDD9-202ENST00000379446 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.15□□□□□ -1.43
NEDD9-202ENST00000379446 ARHGAP11AQ6P4F7 1023 aa6.15□□□□□ -1.43
NEDD9-202ENST00000379446 ADAMTSL4Q6UY14 1074 aa6.15□□□□□ -1.43
NEDD9-202ENST00000379446 MED25Q71SY5 747 aa6.15□□□□□ -1.43
NEDD9-202ENST00000379446 TRILQ7L0X0 811 aa6.15□□□□□ -1.43
NEDD9-202ENST00000379446 LRRC70Q7Z2Q7 622 aa6.15□□□□□ -1.43
NEDD9-202ENST00000379446 GALNT5Q7Z7M9 940 aa6.15□□□□□ -1.43
NEDD9-202ENST00000379446 CPSF7Q8N684 471 aaKnown RBP6.15□□□□□ -1.43
NEDD9-202ENST00000379446 ITCHQ96J02 903 aa6.15□□□□□ -1.43
NEDD9-202ENST00000379446 TSGA13Q96PP4 275 aa6.15□□□□□ -1.43
NEDD9-202ENST00000379446 GABRG3Q99928 467 aa6.15□□□□□ -1.43
NEDD9-202ENST00000379446 ARPC5LQ9BPX5 153 aa6.15□□□□□ -1.43
NEDD9-202ENST00000379446 MGME1Q9BQP7 344 aa6.15□□□□□ -1.43
NEDD9-202ENST00000379446 PINK1Q9BXM7 581 aa6.15□□□□□ -1.43
NEDD9-202ENST00000379446 NRSN2Q9GZP1 204 aa6.15□□□□□ -1.43
NEDD9-202ENST00000379446 AMBNQ9NP70 447 aa6.15□□□□□ -1.43
NEDD9-202ENST00000379446 GALPQ9UBC7 116 aa6.15□□□□□ -1.43
NEDD9-202ENST00000379446 UTRNP46939 3433 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 ANKRD34BA5PLL1 514 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 CPSF4LA6NMK7 179 aaKnown RBP6.14□□□□□ -1.43
NEDD9-202ENST00000379446 NME4O00746 187 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 GPR39O43194 453 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 SLC22A3O75751 556 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 FADS2O95864 444 aaKnown RBP6.14□□□□□ -1.43
NEDD9-202ENST00000379446 CAPN3P20807 821 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 ARNTP27540 789 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 HSD11B1P28845 292 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 APLNRP35414 380 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 GSK3BP49841 420 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 TCF15Q12870 199 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 NDUFA5Q16718 116 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 PIP5KL1Q5T9C9 394 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 LANCL3Q6ZV70 420 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 EIF3MQ7L2H7 374 aaKnown RBP6.14□□□□□ -1.43
NEDD9-202ENST00000379446 FBXL14Q8N1E6 418 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 NT5C3BQ969T7 300 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 BDH2Q9BUT1 245 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 ADAM19Q9H013 955 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 RASSF1Q9NS23 344 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 LEF1Q9UJU2 399 aaPredicted RBP6.14□□□□□ -1.43
NEDD9-202ENST00000379446 ZNF221Q9UK13 617 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 ERGIC3Q9Y282 383 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 DNAJC15Q9Y5T4 150 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 IGF2RP11717 2491 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 CSPG4Q6UVK1 2322 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 A0A1B0GUH1 482 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 UGT2B17O75795 530 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 FCGR1AP12314 374 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 IDO1P14902 403 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 CD1CP29017 333 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 DNAJA1P31689 397 aaKnown RBP6.14□□□□□ -1.43
NEDD9-202ENST00000379446 TTKP33981 857 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 MAGEA12P43365 314 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 METAP1P53582 386 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 DUSP2Q05923 314 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 GLYATQ6IB77 296 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 SMARCD3Q6STE5 483 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 SPRED1Q7Z699 444 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 OR4D9Q8NGE8 314 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 OR8S1Q8NH09 359 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 ZFP90Q8TF47 636 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 COQ8BQ96D53 544 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 HOPXQ9BPY8 73 aaPredicted RBP6.14□□□□□ -1.43
NEDD9-202ENST00000379446 TMEM246Q9BRR3 403 aa6.14□□□□□ -1.43
NEDD9-202ENST00000379446 RIBC2Q9H4K1 309 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms