RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 ANKRD17O75179 2603 aaKnown RBP17.24■□□□□ 0.35
TMEM88B-201ENST00000378821 OR6C70A6NIJ9 312 aa17.24■□□□□ 0.35
TMEM88B-201ENST00000378821 SYT5O00445 386 aa17.24■□□□□ 0.35
TMEM88B-201ENST00000378821 SNPHO15079 494 aa17.24■□□□□ 0.35
TMEM88B-201ENST00000378821 PDPK1O15530 556 aa17.24■□□□□ 0.35
TMEM88B-201ENST00000378821 PLOD3O60568 738 aa17.24■□□□□ 0.35
TMEM88B-201ENST00000378821 ICOSLGO75144 302 aa17.24■□□□□ 0.35
TMEM88B-201ENST00000378821 UGT2B11O75310 529 aa17.24■□□□□ 0.35
TMEM88B-201ENST00000378821 NME6O75414 186 aaPredicted RBP17.24■□□□□ 0.35
TMEM88B-201ENST00000378821 TRAPPC6AO75865 159 aa17.24■□□□□ 0.35
TMEM88B-201ENST00000378821 CT45A8P0DMV1 189 aa17.24■□□□□ 0.35
TMEM88B-201ENST00000378821 CT45A9P0DMV2 189 aa17.24■□□□□ 0.35
TMEM88B-201ENST00000378821 PRPS2P11908 318 aa17.24■□□□□ 0.35
TMEM88B-201ENST00000378821 MC3RP41968 323 aa17.24■□□□□ 0.35
TMEM88B-201ENST00000378821 MASP1P48740 699 aa17.24■□□□□ 0.35
TMEM88B-201ENST00000378821 PSPHP78330 225 aa17.24■□□□□ 0.35
TMEM88B-201ENST00000378821 CT45A2Q5DJT8 189 aa17.24■□□□□ 0.35
TMEM88B-201ENST00000378821 LACC1Q8IV20 430 aa17.24■□□□□ 0.35
TMEM88B-201ENST00000378821 OR1J4Q8NGS1 313 aa17.24■□□□□ 0.35
TMEM88B-201ENST00000378821 SLC35A4Q96G79 324 aa17.24■□□□□ 0.35
TMEM88B-201ENST00000378821 MEAF6Q9HAF1 191 aa17.24■□□□□ 0.35
TMEM88B-201ENST00000378821 ZNF446Q9NWS9 450 aa17.24■□□□□ 0.35
TMEM88B-201ENST00000378821 L3MBTL1Q9Y468 752 aa17.24■□□□□ 0.35
TMEM88B-201ENST00000378821 C15orf38-AP3S2A0A0A6YYH1 394 aa17.23■□□□□ 0.35
TMEM88B-201ENST00000378821 KLF11O14901 512 aa17.23■□□□□ 0.35
TMEM88B-201ENST00000378821 SCAMP2O15127 329 aaKnown RBP17.23■□□□□ 0.35
TMEM88B-201ENST00000378821 G6PDP11413 515 aa17.23■□□□□ 0.35
TMEM88B-201ENST00000378821 BMP7P18075 431 aa17.23■□□□□ 0.35
TMEM88B-201ENST00000378821 HPCAL1P37235 193 aa17.23■□□□□ 0.35
TMEM88B-201ENST00000378821 EMX2Q04743 252 aa17.23■□□□□ 0.35
TMEM88B-201ENST00000378821 PLCXD2Q0VAA5 305 aa17.23■□□□□ 0.35
TMEM88B-201ENST00000378821 SF3B4Q15427 424 aaKnown RBP eCLIP17.23■□□□□ 0.35
TMEM88B-201ENST00000378821 FBXL19-AS1Q494R0 122 aa17.23■□□□□ 0.35
TMEM88B-201ENST00000378821 NSUN5P2Q63ZY6 315 aa17.23■□□□□ 0.35
TMEM88B-201ENST00000378821 TMEM107Q6UX40 140 aa17.23■□□□□ 0.35
TMEM88B-201ENST00000378821 ZNF551Q7Z340 670 aaPredicted RBP17.23■□□□□ 0.35
TMEM88B-201ENST00000378821 WDSUB1Q8N9V3 476 aa17.23■□□□□ 0.35
TMEM88B-201ENST00000378821 NAXEQ8NCW5 288 aa17.23■□□□□ 0.35
TMEM88B-201ENST00000378821 NUDT8Q8WV74 236 aa17.23■□□□□ 0.35
TMEM88B-201ENST00000378821 ZNF75CPQ92670 426 aaPredicted RBP17.23■□□□□ 0.35
TMEM88B-201ENST00000378821 MTERF3Q96E29 417 aa17.23■□□□□ 0.35
TMEM88B-201ENST00000378821 WDYHV1Q96HA8 205 aa17.23■□□□□ 0.35
TMEM88B-201ENST00000378821 VSTM2LQ96N03 204 aa17.23■□□□□ 0.35
TMEM88B-201ENST00000378821 UGT2B28Q9BY64 529 aa17.23■□□□□ 0.35
TMEM88B-201ENST00000378821 METTL7AQ9H8H3 244 aa17.23■□□□□ 0.35
TMEM88B-201ENST00000378821 ASIC5Q9NY37 505 aa17.23■□□□□ 0.35
TMEM88B-201ENST00000378821 NOP53Q9NZM5 478 aaKnown RBP17.23■□□□□ 0.35
TMEM88B-201ENST00000378821 SH3BP4Q9P0V3 963 aa17.23■□□□□ 0.35
TMEM88B-201ENST00000378821 ZNF629Q9UEG4 869 aaPredicted RBP17.23■□□□□ 0.35
TMEM88B-201ENST00000378821 ATP6V1HQ9UI12 483 aa17.23■□□□□ 0.35
TMEM88B-201ENST00000378821 EIF3LQ9Y262 564 aaKnown RBP17.23■□□□□ 0.35
TMEM88B-201ENST00000378821 CD8B2A6NJW9 211 aa17.22■□□□□ 0.35
TMEM88B-201ENST00000378821 KDM4EB2RXH2 506 aaPredicted RBP17.22■□□□□ 0.35
TMEM88B-201ENST00000378821 SDHDO14521 159 aa17.22■□□□□ 0.35
TMEM88B-201ENST00000378821 TSPAN2O60636 221 aa17.22■□□□□ 0.35
TMEM88B-201ENST00000378821 ABCB7O75027 752 aa17.22■□□□□ 0.35
TMEM88B-201ENST00000378821 CBR3O75828 277 aa17.22■□□□□ 0.35
TMEM88B-201ENST00000378821 ACTL6AO96019 429 aa17.22■□□□□ 0.35
TMEM88B-201ENST00000378821 KITP10721 976 aa17.22■□□□□ 0.35
TMEM88B-201ENST00000378821 CPN1P15169 458 aa17.22■□□□□ 0.35
TMEM88B-201ENST00000378821 FRKP42685 505 aaPredicted RBP17.22■□□□□ 0.35
TMEM88B-201ENST00000378821 PPP2R2AP63151 447 aa17.22■□□□□ 0.35
TMEM88B-201ENST00000378821 HSPB3Q12988 150 aa17.22■□□□□ 0.35
TMEM88B-201ENST00000378821 MAD2L1Q13257 205 aaPredicted RBP17.22■□□□□ 0.35
TMEM88B-201ENST00000378821 SMU1Q2TAY7 513 aa17.22■□□□□ 0.35
TMEM88B-201ENST00000378821 EIPR1Q53HC9 387 aa17.22■□□□□ 0.35
TMEM88B-201ENST00000378821 ANGPTL8Q6UXH0 198 aa17.22■□□□□ 0.35
TMEM88B-201ENST00000378821 R3HCC1LQ7Z5L2 792 aaKnown RBP17.22■□□□□ 0.35
TMEM88B-201ENST00000378821 CDH24Q86UP0 819 aa17.22■□□□□ 0.35
TMEM88B-201ENST00000378821 KRTCAP2Q8N6L1 136 aa17.22■□□□□ 0.35
TMEM88B-201ENST00000378821 RELL2Q8NC24 303 aaPredicted RBP17.22■□□□□ 0.35
TMEM88B-201ENST00000378821 FAM83FQ8NEG4 500 aaPredicted RBP17.22■□□□□ 0.35
TMEM88B-201ENST00000378821 TNIP2Q8NFZ5 429 aa17.22■□□□□ 0.35
TMEM88B-201ENST00000378821 OR7A2PQ8NGA2 310 aa17.22■□□□□ 0.35
TMEM88B-201ENST00000378821 COL21A1Q96P44 957 aa17.22■□□□□ 0.35
TMEM88B-201ENST00000378821 ZNF559Q9BR84 538 aa17.22■□□□□ 0.35
TMEM88B-201ENST00000378821 OSBPL11Q9BXB4 747 aa17.22■□□□□ 0.35
TMEM88B-201ENST00000378821 OR2B2Q9GZK3 357 aa17.22■□□□□ 0.35
TMEM88B-201ENST00000378821 CALHM2Q9HA72 323 aa17.22■□□□□ 0.35
TMEM88B-201ENST00000378821 GALNT9Q9HCQ5 603 aa17.22■□□□□ 0.35
TMEM88B-201ENST00000378821 SLC6A5Q9Y345 797 aa17.22■□□□□ 0.35
TMEM88B-201ENST00000378821 MRPS18CQ9Y3D5 142 aaKnown RBP17.22■□□□□ 0.35
TMEM88B-201ENST00000378821 KIAA1549Q9HCM3 1950 aa17.22■□□□□ 0.35
TMEM88B-201ENST00000378821 HIVEP1P15822 2718 aa17.21■□□□□ 0.35
TMEM88B-201ENST00000378821 CCDC168Q8NDH2 2452 aa17.21■□□□□ 0.35
TMEM88B-201ENST00000378821 A0A087WV62 115 aa17.21■□□□□ 0.35
TMEM88B-201ENST00000378821 MBD3L4A6NDZ8 208 aaPredicted RBP17.21■□□□□ 0.35
TMEM88B-201ENST00000378821 MBD3L3A6NE82 208 aaPredicted RBP17.21■□□□□ 0.35
TMEM88B-201ENST00000378821 MBD3L5A6NJ08 208 aaPredicted RBP17.21■□□□□ 0.35
TMEM88B-201ENST00000378821 PLOD2O00469 737 aa17.21■□□□□ 0.35
TMEM88B-201ENST00000378821 GNB5O14775 395 aa17.21■□□□□ 0.35
TMEM88B-201ENST00000378821 HDAC3O15379 428 aa17.21■□□□□ 0.35
TMEM88B-201ENST00000378821 SLITRK5O94991 958 aa17.21■□□□□ 0.35
TMEM88B-201ENST00000378821 EFNA1P20827 205 aaPredicted RBP17.21■□□□□ 0.35
TMEM88B-201ENST00000378821 PEX19P40855 299 aa17.21■□□□□ 0.35
TMEM88B-201ENST00000378821 DIO3P55073 304 aa17.21■□□□□ 0.35
TMEM88B-201ENST00000378821 WIPI1Q5MNZ9 446 aaPredicted RBP17.21■□□□□ 0.35
TMEM88B-201ENST00000378821 DCST1Q5T197 706 aa17.21■□□□□ 0.35
TMEM88B-201ENST00000378821 ARSKQ6UWY0 536 aa17.21■□□□□ 0.35
TMEM88B-201ENST00000378821 SPNS3Q6ZMD2 512 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms