RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 TPRA1Q86W33 373 aa11.15□□□□□ -0.62
NPHP4-202ENST00000378161 MRPS31Q92665 395 aaKnown RBP11.15□□□□□ -0.62
NPHP4-202ENST00000378161 RAB24Q969Q5 203 aa11.15□□□□□ -0.62
NPHP4-202ENST00000378161 ZC3HAV1LQ96H79 300 aaKnown RBP11.15□□□□□ -0.62
NPHP4-202ENST00000378161 C3orf30Q96M34 536 aa11.15□□□□□ -0.62
NPHP4-202ENST00000378161 ZNF649Q9BS31 505 aa11.15□□□□□ -0.62
NPHP4-202ENST00000378161 POLDIP3Q9BY77 421 aaKnown RBP11.15□□□□□ -0.62
NPHP4-202ENST00000378161 OR51V1Q9H2C8 321 aa11.15□□□□□ -0.62
NPHP4-202ENST00000378161 PIGVQ9NUD9 493 aa11.15□□□□□ -0.62
NPHP4-202ENST00000378161 METTL1Q9UBP6 276 aaKnown RBP11.15□□□□□ -0.62
NPHP4-202ENST00000378161 UPB1Q9UBR1 384 aa11.15□□□□□ -0.62
NPHP4-202ENST00000378161 ZNF705FA8MVS1 300 aaPredicted RBP11.15□□□□□ -0.62
NPHP4-202ENST00000378161 J3KR12 359 aa11.15□□□□□ -0.62
NPHP4-202ENST00000378161 M0R082 166 aa11.15□□□□□ -0.62
NPHP4-202ENST00000378161 TLR4O00206 839 aa11.15□□□□□ -0.62
NPHP4-202ENST00000378161 ARPC1BO15143 372 aaKnown RBP11.15□□□□□ -0.62
NPHP4-202ENST00000378161 MBTPS2O43462 519 aa11.15□□□□□ -0.62
NPHP4-202ENST00000378161 ZNF705DP0CH99 300 aaPredicted RBP11.15□□□□□ -0.62
NPHP4-202ENST00000378161 ZNF705BP0CI00 300 aaPredicted RBP11.15□□□□□ -0.62
NPHP4-202ENST00000378161 SDHAP31040 664 aa11.15□□□□□ -0.62
NPHP4-202ENST00000378161 ARRB2P32121 409 aa11.15□□□□□ -0.62
NPHP4-202ENST00000378161 CCR4P51679 360 aa11.15□□□□□ -0.62
NPHP4-202ENST00000378161 HNF4GQ14541 408 aa11.15□□□□□ -0.62
NPHP4-202ENST00000378161 P2RY14Q15391 338 aa11.15□□□□□ -0.62
NPHP4-202ENST00000378161 Q5PR19 223 aa11.15□□□□□ -0.62
NPHP4-202ENST00000378161 STEAP4Q687X5 459 aa11.15□□□□□ -0.62
NPHP4-202ENST00000378161 UBE2R2Q712K3 238 aaPredicted RBP11.15□□□□□ -0.62
NPHP4-202ENST00000378161 KIAA0907Q7Z7F0 614 aaPredicted RBP11.15□□□□□ -0.62
NPHP4-202ENST00000378161 RHNO1Q9BSD3 238 aa11.15□□□□□ -0.62
NPHP4-202ENST00000378161 ACKR4Q9NPB9 350 aa11.15□□□□□ -0.62
NPHP4-202ENST00000378161 ASCL3Q9NQ33 180 aa11.15□□□□□ -0.62
NPHP4-202ENST00000378161 RBM7Q9Y580 266 aaKnown RBP11.15□□□□□ -0.62
NPHP4-202ENST00000378161 PLSCR5A0PG75 271 aa11.15□□□□□ -0.62
NPHP4-202ENST00000378161 PLA2G10O15496 165 aa11.15□□□□□ -0.62
NPHP4-202ENST00000378161 SOX15O60248 233 aa11.15□□□□□ -0.62
NPHP4-202ENST00000378161 MPC2O95563 127 aa11.15□□□□□ -0.62
NPHP4-202ENST00000378161 PKMP14618 531 aaKnown RBP11.15□□□□□ -0.62
NPHP4-202ENST00000378161 GGT2P36268 569 aa11.15□□□□□ -0.62
NPHP4-202ENST00000378161 HMGN3Q15651 99 aa11.15□□□□□ -0.62
NPHP4-202ENST00000378161 LRRC37A5PQ49AS3 106 aa11.15□□□□□ -0.62
NPHP4-202ENST00000378161 ATAT1Q5SQI0 421 aa11.15□□□□□ -0.62
NPHP4-202ENST00000378161 LYPD4Q6UWN0 246 aa11.15□□□□□ -0.62
NPHP4-202ENST00000378161 SLC25A46Q96AG3 418 aa11.15□□□□□ -0.62
NPHP4-202ENST00000378161 DNAJC27Q9NZQ0 273 aa11.15□□□□□ -0.62
NPHP4-202ENST00000378161 EPHA6Q9UF33 1036 aa11.15□□□□□ -0.62
NPHP4-202ENST00000378161 V9GYH0 126 aa11.15□□□□□ -0.62
NPHP4-202ENST00000378161 A0A1W2PRB8 838 aa11.14□□□□□ -0.63
NPHP4-202ENST00000378161 AGAP14A8MT82 685 aa11.14□□□□□ -0.63
NPHP4-202ENST00000378161 F10P00742 488 aa11.14□□□□□ -0.63
NPHP4-202ENST00000378161 PCCBP05166 539 aa11.14□□□□□ -0.63
NPHP4-202ENST00000378161 RHOQP17081 205 aa11.14□□□□□ -0.63
NPHP4-202ENST00000378161 SLC16A1P53985 500 aa11.14□□□□□ -0.63
NPHP4-202ENST00000378161 PAGE3Q5JUK9 113 aa11.14□□□□□ -0.63
NPHP4-202ENST00000378161 PRSS36Q5K4E3 855 aa11.14□□□□□ -0.63
NPHP4-202ENST00000378161 ARMC12Q5T9G4 340 aa11.14□□□□□ -0.63
NPHP4-202ENST00000378161 LDB1Q86U70 411 aaPredicted RBP11.14□□□□□ -0.63
NPHP4-202ENST00000378161 PUSL1Q8N0Z8 303 aaKnown RBP11.14□□□□□ -0.63
NPHP4-202ENST00000378161 PCED1BQ96HM7 432 aa11.14□□□□□ -0.63
NPHP4-202ENST00000378161 PHB2Q99623 299 aa11.14□□□□□ -0.63
NPHP4-202ENST00000378161 SDR39U1Q9NRG7 319 aaPredicted RBP11.14□□□□□ -0.63
NPHP4-202ENST00000378161 ZNF282Q9UDV7 671 aaPredicted RBP11.14□□□□□ -0.63
NPHP4-202ENST00000378161 CDH10Q9Y6N8 788 aa11.14□□□□□ -0.63
NPHP4-202ENST00000378161 SIGLEC5O15389 551 aa11.14□□□□□ -0.63
NPHP4-202ENST00000378161 RNF13O43567 381 aa11.14□□□□□ -0.63
NPHP4-202ENST00000378161 OR10H3O60404 316 aa11.14□□□□□ -0.63
NPHP4-202ENST00000378161 UROSP10746 265 aa11.14□□□□□ -0.63
NPHP4-202ENST00000378161 SIGLEC14Q08ET2 396 aa11.14□□□□□ -0.63
NPHP4-202ENST00000378161 GINS1Q14691 196 aa11.14□□□□□ -0.63
NPHP4-202ENST00000378161 ZNF239Q16600 458 aaKnown RBP11.14□□□□□ -0.63
NPHP4-202ENST00000378161 B3GNTL1Q67FW5 361 aaPredicted RBP11.14□□□□□ -0.63
NPHP4-202ENST00000378161 MTFR2Q6P444 385 aa11.14□□□□□ -0.63
NPHP4-202ENST00000378161 PELI3Q8N2H9 469 aa11.14□□□□□ -0.63
NPHP4-202ENST00000378161 ASB16Q96NS5 453 aa11.14□□□□□ -0.63
NPHP4-202ENST00000378161 BRINP2Q9C0B6 783 aa11.14□□□□□ -0.63
NPHP4-202ENST00000378161 ARL15Q9NXU5 204 aa11.14□□□□□ -0.63
NPHP4-202ENST00000378161 TAS2R10Q9NYW0 307 aa11.14□□□□□ -0.63
NPHP4-202ENST00000378161 CNOT2Q9NZN8 540 aaKnown RBP11.14□□□□□ -0.63
NPHP4-202ENST00000378161 GGT3PA6NGU5 568 aa11.14□□□□□ -0.63
NPHP4-202ENST00000378161 M0QZK8 103 aa11.14□□□□□ -0.63
NPHP4-202ENST00000378161 MAGEB4O15481 346 aaPredicted RBP11.14□□□□□ -0.63
NPHP4-202ENST00000378161 RPLP1P05386 114 aaKnown RBP11.14□□□□□ -0.63
NPHP4-202ENST00000378161 CD3GP09693 182 aa11.14□□□□□ -0.63
NPHP4-202ENST00000378161 GABRR2P28476 465 aa11.14□□□□□ -0.63
NPHP4-202ENST00000378161 PTTG1IPP53801 180 aa11.14□□□□□ -0.63
NPHP4-202ENST00000378161 YBEYP58557 167 aaPredicted RBP11.14□□□□□ -0.63
NPHP4-202ENST00000378161 ACSM2AQ08AH3 577 aa11.14□□□□□ -0.63
NPHP4-202ENST00000378161 PTPRRQ15256 657 aa11.14□□□□□ -0.63
NPHP4-202ENST00000378161 FAM174BQ3ZCQ3 159 aa11.14□□□□□ -0.63
NPHP4-202ENST00000378161 ATG9BQ674R7 924 aa11.14□□□□□ -0.63
NPHP4-202ENST00000378161 ACSM2BQ68CK6 577 aa11.14□□□□□ -0.63
NPHP4-202ENST00000378161 C18orf63Q68DL7 685 aa11.14□□□□□ -0.63
NPHP4-202ENST00000378161 LPCAT3Q6P1A2 487 aa11.14□□□□□ -0.63
NPHP4-202ENST00000378161 FBXO46Q6PJ61 603 aaPredicted RBP11.14□□□□□ -0.63
NPHP4-202ENST00000378161 OR2L3Q8NG85 312 aa11.14□□□□□ -0.63
NPHP4-202ENST00000378161 CREB3L4Q8TEY5 395 aa11.14□□□□□ -0.63
NPHP4-202ENST00000378161 NPY6RQ99463 290 aa11.14□□□□□ -0.63
NPHP4-202ENST00000378161 SPSB2Q99619 263 aa11.14□□□□□ -0.63
NPHP4-202ENST00000378161 CREBZFQ9NS37 354 aa11.14□□□□□ -0.63
NPHP4-202ENST00000378161 PDE4DIPQ5VU43 2346 aa11.14□□□□□ -0.63
NPHP4-202ENST00000378161 MYBPHLA2RUH7 354 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms