RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 CDK5R2Q13319 367 aa7.59□□□□□ -1.19
CKAP2-203ENST00000378037 FAM71E1Q6IPT2 247 aa7.59□□□□□ -1.19
CKAP2-203ENST00000378037 SHQ1Q6PI26 577 aaKnown RBP7.59□□□□□ -1.19
CKAP2-203ENST00000378037 LAPTM4BQ86VI4 370 aa7.59□□□□□ -1.19
CKAP2-203ENST00000378037 TMEM151BQ8IW70 566 aa7.59□□□□□ -1.19
CKAP2-203ENST00000378037 SLC22A18ASQ8N1D0 253 aa7.59□□□□□ -1.19
CKAP2-203ENST00000378037 MARVELD2Q8N4S9 558 aa7.59□□□□□ -1.19
CKAP2-203ENST00000378037 POMGNT2Q8NAT1 580 aa7.59□□□□□ -1.19
CKAP2-203ENST00000378037 SDR9C7Q8NEX9 313 aa7.59□□□□□ -1.19
CKAP2-203ENST00000378037 PIGXQ8TBF5 258 aa7.59□□□□□ -1.19
CKAP2-203ENST00000378037 TM9SF2Q99805 663 aa7.59□□□□□ -1.19
CKAP2-203ENST00000378037 OCEL1Q9H607 264 aa7.59□□□□□ -1.19
CKAP2-203ENST00000378037 KIR3DX1Q9H7L2 352 aa7.59□□□□□ -1.19
CKAP2-203ENST00000378037 KLRF1Q9NZS2 232 aa7.59□□□□□ -1.19
CKAP2-203ENST00000378037 ABCD2Q9UBJ2 740 aa7.59□□□□□ -1.19
CKAP2-203ENST00000378037 DMTF1Q9Y222 760 aa7.59□□□□□ -1.19
CKAP2-203ENST00000378037 R4GN57 208 aa7.59□□□□□ -1.19
CKAP2-203ENST00000378037 PTPN13Q12923 2485 aa7.59□□□□□ -1.19
CKAP2-203ENST00000378037 MYLKQ15746 1914 aa7.59□□□□□ -1.2
CKAP2-203ENST00000378037 HYKKA2RU49 373 aa7.58□□□□□ -1.2
CKAP2-203ENST00000378037 TVP23AA6NH52 213 aa7.58□□□□□ -1.2
CKAP2-203ENST00000378037 CD8B2A6NJW9 211 aa7.58□□□□□ -1.2
CKAP2-203ENST00000378037 MCIDASD6RGH6 385 aa7.58□□□□□ -1.2
CKAP2-203ENST00000378037 CHRM4P08173 479 aa7.58□□□□□ -1.2
CKAP2-203ENST00000378037 CD8BP10966 210 aa7.58□□□□□ -1.2
CKAP2-203ENST00000378037 NDUFS1P28331 727 aa7.58□□□□□ -1.2
CKAP2-203ENST00000378037 BSGP35613 385 aa7.58□□□□□ -1.2
CKAP2-203ENST00000378037 MRPL2Q5T653 305 aaKnown RBP7.58□□□□□ -1.2
CKAP2-203ENST00000378037 FBXO42Q6P3S6 717 aa7.58□□□□□ -1.2
CKAP2-203ENST00000378037 RTL4Q6ZR62 310 aa7.58□□□□□ -1.2
CKAP2-203ENST00000378037 KRT74Q7RTS7 529 aa7.58□□□□□ -1.2
CKAP2-203ENST00000378037 OAFQ86UD1 273 aa7.58□□□□□ -1.2
CKAP2-203ENST00000378037 MARCH9Q86YJ5 346 aa7.58□□□□□ -1.2
CKAP2-203ENST00000378037 TMEM52Q8NDY8 209 aa7.58□□□□□ -1.2
CKAP2-203ENST00000378037 ZMYND19Q96E35 227 aaPredicted RBP7.58□□□□□ -1.2
CKAP2-203ENST00000378037 RNFT2Q96EX2 444 aa7.58□□□□□ -1.2
CKAP2-203ENST00000378037 ZNF597Q96LX8 424 aa7.58□□□□□ -1.2
CKAP2-203ENST00000378037 SLC38A2Q96QD8 506 aa7.58□□□□□ -1.2
CKAP2-203ENST00000378037 OR6C1Q96RD1 312 aa7.58□□□□□ -1.2
CKAP2-203ENST00000378037 RAB11FIP5Q9BXF6 653 aa7.58□□□□□ -1.2
CKAP2-203ENST00000378037 BHLHE41Q9C0J9 482 aaPredicted RBP7.58□□□□□ -1.2
CKAP2-203ENST00000378037 C8orf33Q9H7E9 229 aaPredicted RBP7.58□□□□□ -1.2
CKAP2-203ENST00000378037 CENPMQ9NSP4 180 aa7.58□□□□□ -1.2
CKAP2-203ENST00000378037 ZNF346Q9UL40 294 aaKnown RBP7.58□□□□□ -1.2
CKAP2-203ENST00000378037 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.58□□□□□ -1.23e-6■■■■■ 38.2
CKAP2-203ENST00000378037 FRYQ5TBA9 3013 aa7.58□□□□□ -1.2
CKAP2-203ENST00000378037 A0A1W2PRG6 482 aa7.58□□□□□ -1.2
CKAP2-203ENST00000378037 ZNHIT1O43257 154 aa7.58□□□□□ -1.2
CKAP2-203ENST00000378037 EMC8O43402 210 aa7.58□□□□□ -1.2
CKAP2-203ENST00000378037 UGT2B11O75310 529 aa7.58□□□□□ -1.2
CKAP2-203ENST00000378037 CSTF2P33240 577 aaKnown RBP eCLIP7.58□□□□□ -1.2
CKAP2-203ENST00000378037 CDH11P55287 796 aa7.58□□□□□ -1.2
CKAP2-203ENST00000378037 NDUFA9Q16795 377 aa7.58□□□□□ -1.2
CKAP2-203ENST00000378037 ZNF57Q68EA5 555 aaPredicted RBP7.58□□□□□ -1.2
CKAP2-203ENST00000378037 SYT9Q86SS6 491 aa7.58□□□□□ -1.2
CKAP2-203ENST00000378037 CHDHQ8NE62 594 aaPredicted RBP7.58□□□□□ -1.2
CKAP2-203ENST00000378037 TESCQ96BS2 214 aa7.58□□□□□ -1.2
CKAP2-203ENST00000378037 ZFP3Q96NJ6 502 aa7.58□□□□□ -1.2
CKAP2-203ENST00000378037 OR5M11Q96RB7 305 aa7.58□□□□□ -1.2
CKAP2-203ENST00000378037 GFM1Q96RP9 751 aaKnown RBP7.58□□□□□ -1.2
CKAP2-203ENST00000378037 SGPP1Q9BX95 441 aa7.58□□□□□ -1.2
CKAP2-203ENST00000378037 HDHD2Q9H0R4 259 aa7.58□□□□□ -1.2
CKAP2-203ENST00000378037 SEC61A2Q9H9S3 476 aa7.58□□□□□ -1.2
CKAP2-203ENST00000378037 TIGARQ9NQ88 270 aa7.58□□□□□ -1.2
CKAP2-203ENST00000378037 ING1Q9UK53 422 aaPredicted RBP7.58□□□□□ -1.2
CKAP2-203ENST00000378037 CREBBPQ92793 2442 aa7.58□□□□□ -1.2
CKAP2-203ENST00000378037 PTPRQQ9UMZ3 2332 aa7.58□□□□□ -1.2
CKAP2-203ENST00000378037 KCNE1BA0A087WTH5 132 aa7.58□□□□□ -1.2
CKAP2-203ENST00000378037 C17orf113A0A1B0GUU1 675 aa7.58□□□□□ -1.2
CKAP2-203ENST00000378037 ELOA3DA6NLF2 546 aaPredicted RBP7.58□□□□□ -1.2
CKAP2-203ENST00000378037 ZNF99A8MXY4 864 aaPredicted RBP7.58□□□□□ -1.2
CKAP2-203ENST00000378037 HMGN4O00479 90 aa7.58□□□□□ -1.2
CKAP2-203ENST00000378037 RNASET2O00584 256 aaKnown RBP7.58□□□□□ -1.2
CKAP2-203ENST00000378037 SEC14L5O43304 696 aa7.58□□□□□ -1.2
CKAP2-203ENST00000378037 TSC22D2O75157 780 aa7.58□□□□□ -1.2
CKAP2-203ENST00000378037 TRAPPC6AO75865 159 aa7.58□□□□□ -1.2
CKAP2-203ENST00000378037 SPINK2P20155 84 aa7.58□□□□□ -1.2
CKAP2-203ENST00000378037 DPTQ07507 201 aa7.58□□□□□ -1.2
CKAP2-203ENST00000378037 ELOA3BQ3SY89 546 aa7.58□□□□□ -1.2
CKAP2-203ENST00000378037 ALG10BQ5I7T1 473 aa7.58□□□□□ -1.2
CKAP2-203ENST00000378037 C22orf42Q6IC83 251 aa7.58□□□□□ -1.2
CKAP2-203ENST00000378037 FRRS1Q6ZNA5 592 aa7.58□□□□□ -1.2
CKAP2-203ENST00000378037 ELOA3Q8NG57 546 aa7.58□□□□□ -1.2
CKAP2-203ENST00000378037 TTLQ8NG68 377 aa7.58□□□□□ -1.2
CKAP2-203ENST00000378037 OR13C2Q8NGS9 318 aa7.58□□□□□ -1.2
CKAP2-203ENST00000378037 OR51Q1Q8NH59 317 aa7.58□□□□□ -1.2
CKAP2-203ENST00000378037 ZNF671Q8TAW3 534 aa7.58□□□□□ -1.2
CKAP2-203ENST00000378037 RHBDD1Q8TEB9 315 aa7.58□□□□□ -1.2
CKAP2-203ENST00000378037 CNOT9Q92600 299 aaKnown RBP7.58□□□□□ -1.2
CKAP2-203ENST00000378037 ZNF578Q96N58 590 aaPredicted RBP7.58□□□□□ -1.2
CKAP2-203ENST00000378037 TSSK2Q96PF2 358 aa7.58□□□□□ -1.2
CKAP2-203ENST00000378037 ERMAPQ96PL5 475 aaPredicted RBP7.58□□□□□ -1.2
CKAP2-203ENST00000378037 SECISBP2Q96T21 854 aaKnown RBP7.58□□□□□ -1.2
CKAP2-203ENST00000378037 GDF15Q99988 308 aa7.58□□□□□ -1.2
CKAP2-203ENST00000378037 TTYH2Q9BSA4 534 aa7.58□□□□□ -1.2
CKAP2-203ENST00000378037 TEX101Q9BY14 249 aa7.58□□□□□ -1.2
CKAP2-203ENST00000378037 TRIM2Q9C040 744 aa7.58□□□□□ -1.2
CKAP2-203ENST00000378037 GALNT8Q9NY28 637 aa7.58□□□□□ -1.2
CKAP2-203ENST00000378037 ETAA1Q9NY74 926 aa7.58□□□□□ -1.2
CKAP2-203ENST00000378037 WBP11Q9Y2W2 641 aaKnown RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms