RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 SLC38A1Q9H2H9 487 aa19.63■□□□□ 0.73
CBWD3-202ENST00000377342 LIPT1Q9Y234 373 aa19.63■□□□□ 0.73
CBWD3-202ENST00000377342 PCDHGB3Q9Y5G1 929 aa19.63■□□□□ 0.73
CBWD3-202ENST00000377342 A6NL46 340 aa19.62■□□□□ 0.73
CBWD3-202ENST00000377342 SLC28A2O43868 658 aa19.62■□□□□ 0.73
CBWD3-202ENST00000377342 TSPAN2O60636 221 aa19.62■□□□□ 0.73
CBWD3-202ENST00000377342 CEACAM4O75871 244 aa19.62■□□□□ 0.73
CBWD3-202ENST00000377342 SOX30O94993 753 aa19.62■□□□□ 0.73
CBWD3-202ENST00000377342 PGM1P36871 562 aa19.62■□□□□ 0.73
CBWD3-202ENST00000377342 SOX3P41225 446 aa19.62■□□□□ 0.73
CBWD3-202ENST00000377342 PSPHP78330 225 aa19.62■□□□□ 0.73
CBWD3-202ENST00000377342 RBBP4Q09028 425 aa19.62■□□□□ 0.73
CBWD3-202ENST00000377342 SPATS1Q496A3 300 aa19.62■□□□□ 0.73
CBWD3-202ENST00000377342 DESI1Q6ICB0 168 aa19.62■□□□□ 0.73
CBWD3-202ENST00000377342 ERICH5Q6P6B1 374 aa19.62■□□□□ 0.73
CBWD3-202ENST00000377342 FRRS1Q6ZNA5 592 aa19.62■□□□□ 0.73
CBWD3-202ENST00000377342 ULK2Q8IYT8 1036 aa19.62■□□□□ 0.73
CBWD3-202ENST00000377342 TAGAPQ8N103 731 aa19.62■□□□□ 0.73
CBWD3-202ENST00000377342 SLC22A8Q8TCC7 542 aa19.62■□□□□ 0.73
CBWD3-202ENST00000377342 TRNT1Q96Q11 434 aaKnown RBP19.62■□□□□ 0.73
CBWD3-202ENST00000377342 YARS2Q9Y2Z4 477 aaKnown RBP19.62■□□□□ 0.73
CBWD3-202ENST00000377342 NPFFR2Q9Y5X5 522 aa19.62■□□□□ 0.73
CBWD3-202ENST00000377342 DSPPQ9NZW4 1301 aa19.62■□□□□ 0.73
CBWD3-202ENST00000377342 EML6Q6ZMW3 1958 aa19.62■□□□□ 0.73
CBWD3-202ENST00000377342 ELOVL7A1L3X0 281 aa19.62■□□□□ 0.73
CBWD3-202ENST00000377342 FCMRO60667 390 aa19.62■□□□□ 0.73
CBWD3-202ENST00000377342 IL33O95760 270 aa19.62■□□□□ 0.73
CBWD3-202ENST00000377342 FBXO45P0C2W1 286 aa19.62■□□□□ 0.73
CBWD3-202ENST00000377342 NR2F1P10589 423 aa19.62■□□□□ 0.73
CBWD3-202ENST00000377342 HTR1EP28566 365 aa19.62■□□□□ 0.73
CBWD3-202ENST00000377342 RFX3P48380 749 aa19.62■□□□□ 0.73
CBWD3-202ENST00000377342 PCBP3P57721 371 aaKnown RBP19.62■□□□□ 0.73
CBWD3-202ENST00000377342 DECR1Q16698 335 aa19.62■□□□□ 0.73
CBWD3-202ENST00000377342 MEP1AQ16819 746 aa19.62■□□□□ 0.73
CBWD3-202ENST00000377342 CPEB4Q17RY0 729 aaKnown RBP eCLIP19.62■□□□□ 0.73
CBWD3-202ENST00000377342 GPAT3Q53EU6 434 aa19.62■□□□□ 0.73
CBWD3-202ENST00000377342 CRB2Q5IJ48 1285 aa19.62■□□□□ 0.73
CBWD3-202ENST00000377342 TYW3Q6IPR3 259 aaKnown RBP19.62■□□□□ 0.73
CBWD3-202ENST00000377342 BEST3Q8N1M1 668 aa19.62■□□□□ 0.73
CBWD3-202ENST00000377342 FDCSPQ8NFU4 85 aa19.62■□□□□ 0.73
CBWD3-202ENST00000377342 DIO2Q92813 273 aa19.62■□□□□ 0.73
CBWD3-202ENST00000377342 TREX2Q9BQ50 279 aaPredicted RBP19.62■□□□□ 0.73
CBWD3-202ENST00000377342 ZNF552Q9H707 407 aaPredicted RBP19.62■□□□□ 0.73
CBWD3-202ENST00000377342 TNRC6AQ8NDV7 1962 aaKnown RBP19.61■□□□□ 0.73
CBWD3-202ENST00000377342 CENPVL1A0A0U1RR11 272 aa19.61■□□□□ 0.73
CBWD3-202ENST00000377342 KIAA0513O60268 411 aa19.61■□□□□ 0.73
CBWD3-202ENST00000377342 GCM2O75603 506 aaPredicted RBP19.61■□□□□ 0.73
CBWD3-202ENST00000377342 OR6B1O95007 311 aa19.61■□□□□ 0.73
CBWD3-202ENST00000377342 ALPPP05187 535 aa19.61■□□□□ 0.73
CBWD3-202ENST00000377342 CCL11P51671 97 aa19.61■□□□□ 0.73
CBWD3-202ENST00000377342 CRISP3P54108 245 aa19.61■□□□□ 0.73
CBWD3-202ENST00000377342 NRG3P56975 720 aa19.61■□□□□ 0.73
CBWD3-202ENST00000377342 KCNJ2P63252 427 aa19.61■□□□□ 0.73
CBWD3-202ENST00000377342 ZNF468Q5VIY5 522 aaPredicted RBP19.61■□□□□ 0.73
CBWD3-202ENST00000377342 SLC15A4Q8N697 577 aa19.61■□□□□ 0.73
CBWD3-202ENST00000377342 HIPK4Q8NE63 616 aa19.61■□□□□ 0.73
CBWD3-202ENST00000377342 MCUR1Q96AQ8 359 aa19.61■□□□□ 0.73
CBWD3-202ENST00000377342 CCDC124Q96CT7 223 aaKnown RBP19.61■□□□□ 0.73
CBWD3-202ENST00000377342 ZNF354BQ96LW1 612 aa19.61■□□□□ 0.73
CBWD3-202ENST00000377342 FLRT3Q9NZU0 649 aa19.61■□□□□ 0.73
CBWD3-202ENST00000377342 EGFL7Q9UHF1 273 aa19.61■□□□□ 0.73
CBWD3-202ENST00000377342 USP24Q9UPU5 2620 aa19.61■□□□□ 0.73
CBWD3-202ENST00000377342 UGT2B11O75310 529 aa19.6■□□□□ 0.73
CBWD3-202ENST00000377342 PPM1BO75688 479 aa19.6■□□□□ 0.73
CBWD3-202ENST00000377342 AQP1P29972 269 aa19.6■□□□□ 0.73
CBWD3-202ENST00000377342 SSR4P51571 173 aa19.6■□□□□ 0.73
CBWD3-202ENST00000377342 CRYBA2P53672 197 aa19.6■□□□□ 0.73
CBWD3-202ENST00000377342 CXADRP78310 365 aa19.6■□□□□ 0.73
CBWD3-202ENST00000377342 CHRNEQ04844 493 aa19.6■□□□□ 0.73
CBWD3-202ENST00000377342 VEZF1Q14119 521 aa19.6■□□□□ 0.73
CBWD3-202ENST00000377342 ZNF791Q3KP31 576 aaPredicted RBP19.6■□□□□ 0.73
CBWD3-202ENST00000377342 REEP3Q6NUK4 255 aa19.6■□□□□ 0.73
CBWD3-202ENST00000377342 LRRC74BQ6ZQY2 392 aa19.6■□□□□ 0.73
CBWD3-202ENST00000377342 PTRH1Q86Y79 214 aaKnown RBP19.6■□□□□ 0.73
CBWD3-202ENST00000377342 FBXW8Q8N3Y1 598 aa19.6■□□□□ 0.73
CBWD3-202ENST00000377342 APOBEC4Q8WW27 367 aaKnown RBP19.6■□□□□ 0.73
CBWD3-202ENST00000377342 SPACA9Q96E40 222 aaPredicted RBP19.6■□□□□ 0.73
CBWD3-202ENST00000377342 CRELD1Q96HD1 420 aa19.6■□□□□ 0.73
CBWD3-202ENST00000377342 ADOQ96SZ5 270 aa19.6■□□□□ 0.73
CBWD3-202ENST00000377342 SAP130Q9H0E3 1048 aa19.6■□□□□ 0.73
CBWD3-202ENST00000377342 PCDHAC1Q9H158 963 aa19.6■□□□□ 0.73
CBWD3-202ENST00000377342 BCL2L10Q9HD36 194 aa19.6■□□□□ 0.73
CBWD3-202ENST00000377342 SUCOQ9UBS9 1254 aaKnown RBP19.6■□□□□ 0.73
CBWD3-202ENST00000377342 SLC7A8Q9UHI5 535 aa19.6■□□□□ 0.73
CBWD3-202ENST00000377342 WDR45Q9Y484 360 aa19.6■□□□□ 0.73
CBWD3-202ENST00000377342 ATMQ13315 3056 aa19.59■□□□□ 0.73
CBWD3-202ENST00000377342 NPIPA5A0A0B4J1W7 369 aa19.59■□□□□ 0.73
CBWD3-202ENST00000377342 NPIPA7E9PJI5 369 aa19.59■□□□□ 0.73
CBWD3-202ENST00000377342 STX11O75558 287 aa19.59■□□□□ 0.73
CBWD3-202ENST00000377342 PGM3O95394 542 aa19.59■□□□□ 0.73
CBWD3-202ENST00000377342 GUSBP08236 651 aa19.59■□□□□ 0.73
CBWD3-202ENST00000377342 NPIPA8P0DM63 369 aa19.59■□□□□ 0.73
CBWD3-202ENST00000377342 CYP4B1P13584 511 aa19.59■□□□□ 0.73
CBWD3-202ENST00000377342 GGT1P19440 569 aa19.59■□□□□ 0.73
CBWD3-202ENST00000377342 ME2P23368 584 aa19.59■□□□□ 0.73
CBWD3-202ENST00000377342 FBXW4P57775 412 aa19.59■□□□□ 0.73
CBWD3-202ENST00000377342 IRAK1BP1Q5VVH5 260 aa19.59■□□□□ 0.73
CBWD3-202ENST00000377342 PRAMEF8Q5VWM4 474 aa19.59■□□□□ 0.73
CBWD3-202ENST00000377342 PRAMEF7Q5VXH5 474 aa19.59■□□□□ 0.73
CBWD3-202ENST00000377342 AP1ARQ63HQ0 302 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms