RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 ARRDC3Q96B67 414 aa12.87□□□□□ -0.35
GPC6-201ENST00000377047 SMCO3A2RU48 225 aa12.87□□□□□ -0.35
GPC6-201ENST00000377047 G3V2L1 256 aa12.87□□□□□ -0.35
GPC6-201ENST00000377047 RBBP9O75884 186 aa12.87□□□□□ -0.35
GPC6-201ENST00000377047 ABOP16442 354 aa12.87□□□□□ -0.35
GPC6-201ENST00000377047 MAGEA12P43365 314 aa12.87□□□□□ -0.35
GPC6-201ENST00000377047 ARHGAP19Q14CB8 494 aa12.87□□□□□ -0.35
GPC6-201ENST00000377047 MFSD13AQ14CX5 517 aa12.87□□□□□ -0.35
GPC6-201ENST00000377047 GTDC1Q4AE62 458 aa12.87□□□□□ -0.35
GPC6-201ENST00000377047 SHFQ7M4L6 423 aa12.87□□□□□ -0.35
GPC6-201ENST00000377047 OR4K5Q8NGD3 323 aa12.87□□□□□ -0.35
GPC6-201ENST00000377047 MFSD8Q8NHS3 518 aa12.87□□□□□ -0.35
GPC6-201ENST00000377047 NETO1Q8TDF5 533 aa12.87□□□□□ -0.35
GPC6-201ENST00000377047 FRS2Q8WU20 508 aa12.87□□□□□ -0.35
GPC6-201ENST00000377047 NECAB3Q96P71 396 aaPredicted RBP12.87□□□□□ -0.35
GPC6-201ENST00000377047 RDH14Q9HBH5 336 aa12.87□□□□□ -0.35
GPC6-201ENST00000377047 CNOT4O95628 575 aaKnown RBP12.87□□□□□ -0.35
GPC6-201ENST00000377047 PNMTP11086 282 aa12.87□□□□□ -0.35
GPC6-201ENST00000377047 MAGEA8P43361 318 aa12.87□□□□□ -0.35
GPC6-201ENST00000377047 EIF2B1Q14232 305 aaKnown RBP12.87□□□□□ -0.35
GPC6-201ENST00000377047 DCST2Q5T1A1 773 aa12.87□□□□□ -0.35
GPC6-201ENST00000377047 ACBD7Q8N6N7 88 aa12.87□□□□□ -0.35
GPC6-201ENST00000377047 CUTCQ9NTM9 273 aa12.87□□□□□ -0.35
GPC6-201ENST00000377047 LOC102723532A0A0G2JNH3 316 aa12.87□□□□□ -0.35
GPC6-201ENST00000377047 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.87□□□□□ -0.35
GPC6-201ENST00000377047 SCRG1O75711 98 aa12.87□□□□□ -0.35
GPC6-201ENST00000377047 STSP08842 583 aa12.87□□□□□ -0.35
GPC6-201ENST00000377047 OR1D4P47884 311 aa12.87□□□□□ -0.35
GPC6-201ENST00000377047 CDKL4Q5MAI5 379 aa12.87□□□□□ -0.35
GPC6-201ENST00000377047 WDR53Q7Z5U6 358 aaPredicted RBP12.87□□□□□ -0.35
GPC6-201ENST00000377047 RFT1Q96AA3 541 aa12.87□□□□□ -0.35
GPC6-201ENST00000377047 C12orf43Q96C57 262 aaKnown RBP12.87□□□□□ -0.35
GPC6-201ENST00000377047 SLC45A3Q96JT2 553 aa12.87□□□□□ -0.35
GPC6-201ENST00000377047 PRSS16Q9NQE7 514 aa12.87□□□□□ -0.35
GPC6-201ENST00000377047 REV1Q9UBZ9 1251 aa12.87□□□□□ -0.35
GPC6-201ENST00000377047 AP1M2Q9Y6Q5 423 aa12.87□□□□□ -0.35
GPC6-201ENST00000377047 ANTXRLA6NF34 631 aa12.87□□□□□ -0.35
GPC6-201ENST00000377047 TRIM64BA6NI03 449 aa12.87□□□□□ -0.35
GPC6-201ENST00000377047 EGFP01133 1207 aa12.87□□□□□ -0.35
GPC6-201ENST00000377047 DAP3P51398 398 aaKnown RBP12.87□□□□□ -0.35
GPC6-201ENST00000377047 FOXA1P55317 472 aa12.87□□□□□ -0.35
GPC6-201ENST00000377047 ALKAL1Q6UXT8 129 aa12.87□□□□□ -0.35
GPC6-201ENST00000377047 HACD2Q6Y1H2 254 aa12.87□□□□□ -0.35
GPC6-201ENST00000377047 TMEM173Q86WV6 379 aaPredicted RBP12.87□□□□□ -0.35
GPC6-201ENST00000377047 OR9A4Q8NGU2 314 aa12.87□□□□□ -0.35
GPC6-201ENST00000377047 FEVQ99581 238 aa12.87□□□□□ -0.35
GPC6-201ENST00000377047 MARCH5Q9NX47 278 aa12.87□□□□□ -0.35
GPC6-201ENST00000377047 PCDHA9Q9Y5H5 950 aa12.87□□□□□ -0.35
GPC6-201ENST00000377047 MYH8P13535 1937 aa12.86□□□□□ -0.35
GPC6-201ENST00000377047 MT-ND2P03891 347 aa12.86□□□□□ -0.35
GPC6-201ENST00000377047 TMEM225BP0DP42 221 aa12.86□□□□□ -0.35
GPC6-201ENST00000377047 VASPP50552 380 aaPredicted RBP12.86□□□□□ -0.35
GPC6-201ENST00000377047 RBPJQ06330 500 aa12.86□□□□□ -0.35
GPC6-201ENST00000377047 ATXN7L3Q14CW9 347 aaPredicted RBP12.86□□□□□ -0.35
GPC6-201ENST00000377047 C3orf38Q5JPI3 329 aa12.86□□□□□ -0.35
GPC6-201ENST00000377047 AWAT2Q6E213 333 aa12.86□□□□□ -0.35
GPC6-201ENST00000377047 TLDC1Q6P9B6 456 aa12.86□□□□□ -0.35
GPC6-201ENST00000377047 SYT14Q8NB59 555 aa12.86□□□□□ -0.35
GPC6-201ENST00000377047 OR9K2Q8NGE7 335 aa12.86□□□□□ -0.35
GPC6-201ENST00000377047 OR51L1Q8NGJ5 315 aa12.86□□□□□ -0.35
GPC6-201ENST00000377047 TMEM168Q9H0V1 697 aa12.86□□□□□ -0.35
GPC6-201ENST00000377047 RDH8Q9NYR8 311 aa12.86□□□□□ -0.35
GPC6-201ENST00000377047 CDC14CA4D256 554 aa12.86□□□□□ -0.35
GPC6-201ENST00000377047 EEF1E1O43324 174 aaKnown RBP12.86□□□□□ -0.35
GPC6-201ENST00000377047 PRLP01236 227 aa12.86□□□□□ -0.35
GPC6-201ENST00000377047 IFNGR1P15260 489 aa12.86□□□□□ -0.35
GPC6-201ENST00000377047 PRPS1P60891 318 aa12.86□□□□□ -0.35
GPC6-201ENST00000377047 MANEAQ5SRI9 462 aa12.86□□□□□ -0.35
GPC6-201ENST00000377047 RAB12Q6IQ22 244 aa12.86□□□□□ -0.35
GPC6-201ENST00000377047 RCBTB1Q8NDN9 531 aa12.86□□□□□ -0.35
GPC6-201ENST00000377047 SPPL3Q8TCT6 385 aa12.86□□□□□ -0.35
GPC6-201ENST00000377047 FAM46BQ96A09 425 aa12.86□□□□□ -0.35
GPC6-201ENST00000377047 R3HDMLQ9H3Y0 253 aa12.86□□□□□ -0.35
GPC6-201ENST00000377047 MYH7P12883 1935 aa12.86□□□□□ -0.35
GPC6-201ENST00000377047 ITGB8P26012 769 aa12.86□□□□□ -0.35
GPC6-201ENST00000377047 CD97P48960 835 aa12.86□□□□□ -0.35
GPC6-201ENST00000377047 AFF3P51826 1226 aaKnown RBP12.86□□□□□ -0.35
GPC6-201ENST00000377047 MELKQ14680 651 aa12.86□□□□□ -0.35
GPC6-201ENST00000377047 SHHQ15465 462 aa12.86□□□□□ -0.35
GPC6-201ENST00000377047 EIF5AL1Q6IS14 154 aaKnown RBP12.86□□□□□ -0.35
GPC6-201ENST00000377047 TMEM53Q6P2H8 277 aa12.86□□□□□ -0.35
GPC6-201ENST00000377047 ARL14Q8N4G2 192 aa12.86□□□□□ -0.35
GPC6-201ENST00000377047 FKBP10Q96AY3 582 aa12.86□□□□□ -0.35
GPC6-201ENST00000377047 ADOQ96SZ5 270 aa12.86□□□□□ -0.35
GPC6-201ENST00000377047 INSM2Q96T92 566 aaPredicted RBP12.86□□□□□ -0.35
GPC6-201ENST00000377047 GSTO2Q9H4Y5 243 aa12.86□□□□□ -0.35
GPC6-201ENST00000377047 JRKO75564 520 aa12.86□□□□□ -0.35
GPC6-201ENST00000377047 MRPL21Q7Z2W9 205 aaKnown RBP12.86□□□□□ -0.35
GPC6-201ENST00000377047 AGBL5Q8NDL9 886 aa12.86□□□□□ -0.35
GPC6-201ENST00000377047 PINK1Q9BXM7 581 aa12.86□□□□□ -0.35
GPC6-201ENST00000377047 CNIH4Q9P003 139 aa12.86□□□□□ -0.35
GPC6-201ENST00000377047 PTBP2Q9UKA9 531 aaKnown RBP12.86□□□□□ -0.35
GPC6-201ENST00000377047 RNASET2O00584 256 aaKnown RBP12.86□□□□□ -0.35
GPC6-201ENST00000377047 SYT7O43581 403 aa12.86□□□□□ -0.35
GPC6-201ENST00000377047 DIRAS3O95661 229 aa12.86□□□□□ -0.35
GPC6-201ENST00000377047 SLAMF7Q9NQ25 335 aa12.86□□□□□ -0.35
GPC6-201ENST00000377047 CUEDC1Q9NWM3 386 aaPredicted RBP12.86□□□□□ -0.35
GPC6-201ENST00000377047 MTMR10Q9NXD2 777 aa12.86□□□□□ -0.35
GPC6-201ENST00000377047 MYH3P11055 1940 aa12.86□□□□□ -0.35
GPC6-201ENST00000377047 FRS3O43559 492 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms