RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 MTERF3Q96E29 417 aa11.57□□□□□ -0.56
VRK3-202ENST00000377011 DACH2Q96NX9 599 aa11.57□□□□□ -0.56
VRK3-202ENST00000377011 ZFYVE21Q9BQ24 234 aa11.57□□□□□ -0.56
VRK3-202ENST00000377011 EHD1Q9H4M9 534 aa11.57□□□□□ -0.56
VRK3-202ENST00000377011 CCDC177Q9NQR7 707 aaPredicted RBP11.57□□□□□ -0.56
VRK3-202ENST00000377011 CUTCQ9NTM9 273 aa11.57□□□□□ -0.56
VRK3-202ENST00000377011 CTSFQ9UBX1 484 aa11.57□□□□□ -0.56
VRK3-202ENST00000377011 TCFL5Q9UL49 500 aa11.57□□□□□ -0.56
VRK3-202ENST00000377011 TSC22D4Q9Y3Q8 395 aa11.57□□□□□ -0.56
VRK3-202ENST00000377011 SCN2AQ99250 2005 aa11.57□□□□□ -0.56
VRK3-202ENST00000377011 FITM1A5D6W6 292 aa11.57□□□□□ -0.56
VRK3-202ENST00000377011 GABRR3A8MPY1 467 aa11.57□□□□□ -0.56
VRK3-202ENST00000377011 C21orf140B9A014 251 aa11.57□□□□□ -0.56
VRK3-202ENST00000377011 DNAJB6O75190 326 aa11.57□□□□□ -0.56
VRK3-202ENST00000377011 PDGFAP04085 211 aa11.57□□□□□ -0.56
VRK3-202ENST00000377011 KLK3P07288 261 aaPredicted RBP11.57□□□□□ -0.56
VRK3-202ENST00000377011 UMODP07911 640 aa11.57□□□□□ -0.56
VRK3-202ENST00000377011 ANXA4P09525 319 aaPredicted RBP11.57□□□□□ -0.56
VRK3-202ENST00000377011 ITGA2P17301 1181 aa11.57□□□□□ -0.56
VRK3-202ENST00000377011 KRT20P35900 424 aa11.57□□□□□ -0.56
VRK3-202ENST00000377011 GGT2P36268 569 aa11.57□□□□□ -0.56
VRK3-202ENST00000377011 BCL6P41182 706 aa11.57□□□□□ -0.56
VRK3-202ENST00000377011 SELENOWP63302 87 aa11.57□□□□□ -0.56
VRK3-202ENST00000377011 RPP38P78345 283 aaKnown RBP11.57□□□□□ -0.56
VRK3-202ENST00000377011 SYT16Q17RD7 645 aa11.57□□□□□ -0.56
VRK3-202ENST00000377011 ADPRMQ3LIE5 342 aa11.57□□□□□ -0.56
VRK3-202ENST00000377011 NKAIN1Q4KMZ8 207 aa11.57□□□□□ -0.56
VRK3-202ENST00000377011 MRPL14Q6P1L8 145 aaKnown RBP11.57□□□□□ -0.56
VRK3-202ENST00000377011 MED27Q6P2C8 311 aa11.57□□□□□ -0.56
VRK3-202ENST00000377011 TUBA3EQ6PEY2 450 aa11.57□□□□□ -0.56
VRK3-202ENST00000377011 ADCK2Q7Z695 626 aa11.57□□□□□ -0.56
VRK3-202ENST00000377011 VTCN1Q7Z7D3 282 aa11.57□□□□□ -0.56
VRK3-202ENST00000377011 CLECL1Q8IZS7 167 aa11.57□□□□□ -0.56
VRK3-202ENST00000377011 DEPDC4Q8N2C3 294 aa11.57□□□□□ -0.56
VRK3-202ENST00000377011 ZNF843Q8N446 348 aa11.57□□□□□ -0.56
VRK3-202ENST00000377011 MFSD4AQ8N468 514 aa11.57□□□□□ -0.56
VRK3-202ENST00000377011 RAB42Q8N4Z0 105 aa11.57□□□□□ -0.56
VRK3-202ENST00000377011 C1orf52Q8N6N3 182 aaKnown RBP11.57□□□□□ -0.56
VRK3-202ENST00000377011 MYDGFQ969H8 173 aa11.57□□□□□ -0.56
VRK3-202ENST00000377011 TAMM41Q96BW9 452 aa11.57□□□□□ -0.56
VRK3-202ENST00000377011 EFCAB11Q9BUY7 163 aa11.57□□□□□ -0.56
VRK3-202ENST00000377011 SLC7A5P2Q9GIP4 190 aa11.57□□□□□ -0.56
VRK3-202ENST00000377011 TMEM38AQ9H6F2 299 aa11.57□□□□□ -0.56
VRK3-202ENST00000377011 EXD2Q9NVH0 621 aa11.57□□□□□ -0.56
VRK3-202ENST00000377011 FKBP14Q9NWM8 211 aa11.57□□□□□ -0.56
VRK3-202ENST00000377011 NDOR1Q9UHB4 597 aa11.57□□□□□ -0.56
VRK3-202ENST00000377011 POFUT2Q9Y2G5 429 aa11.57□□□□□ -0.56
VRK3-202ENST00000377011 KCNMB2Q9Y691 235 aa11.57□□□□□ -0.56
VRK3-202ENST00000377011 KCNE2Q9Y6J6 123 aa11.57□□□□□ -0.56
VRK3-202ENST00000377011 HYKKA2RU49 373 aa11.56□□□□□ -0.56
VRK3-202ENST00000377011 PYCARD-AS1I3L0S3 204 aa11.56□□□□□ -0.56
VRK3-202ENST00000377011 ALOX12BO75342 701 aa11.56□□□□□ -0.56
VRK3-202ENST00000377011 WBP4O75554 376 aaKnown RBP11.56□□□□□ -0.56
VRK3-202ENST00000377011 NADKO95544 446 aaPredicted RBP11.56□□□□□ -0.56
VRK3-202ENST00000377011 IFNA14P01570 189 aa11.56□□□□□ -0.56
VRK3-202ENST00000377011 CYP4B1P13584 511 aa11.56□□□□□ -0.56
VRK3-202ENST00000377011 PSMB9P28065 219 aa11.56□□□□□ -0.56
VRK3-202ENST00000377011 ZNF763Q0D2J5 394 aa11.56□□□□□ -0.56
VRK3-202ENST00000377011 PDE7AQ13946 482 aa11.56□□□□□ -0.56
VRK3-202ENST00000377011 HIST2H2ACQ16777 129 aaPredicted RBP11.56□□□□□ -0.56
VRK3-202ENST00000377011 PAGE2BQ5JRK9 111 aa11.56□□□□□ -0.56
VRK3-202ENST00000377011 AGAP7PQ5VUJ5 663 aa11.56□□□□□ -0.56
VRK3-202ENST00000377011 NCCRP1Q6ZVX7 275 aaPredicted RBP11.56□□□□□ -0.56
VRK3-202ENST00000377011 ADCK1Q86TW2 530 aa11.56□□□□□ -0.56
VRK3-202ENST00000377011 LACC1Q8IV20 430 aa11.56□□□□□ -0.56
VRK3-202ENST00000377011 P3H2Q8IVL5 708 aa11.56□□□□□ -0.56
VRK3-202ENST00000377011 LAS2Q8IYD9 372 aa11.56□□□□□ -0.56
VRK3-202ENST00000377011 ENTHD1Q8IYW4 607 aa11.56□□□□□ -0.56
VRK3-202ENST00000377011 ZSCAN1Q8NBB4 408 aa11.56□□□□□ -0.56
VRK3-202ENST00000377011 OR7G3Q8NG95 312 aa11.56□□□□□ -0.56
VRK3-202ENST00000377011 OR52N2Q8NGI0 321 aa11.56□□□□□ -0.56
VRK3-202ENST00000377011 OR10Q1Q8NGQ4 319 aa11.56□□□□□ -0.56
VRK3-202ENST00000377011 SLC38A4Q969I6 547 aa11.56□□□□□ -0.56
VRK3-202ENST00000377011 NEIL2Q969S2 332 aa11.56□□□□□ -0.56
VRK3-202ENST00000377011 MTERF1Q99551 399 aaKnown RBP11.56□□□□□ -0.56
VRK3-202ENST00000377011 ITPAQ9BY32 194 aa11.56□□□□□ -0.56
VRK3-202ENST00000377011 NLNQ9BYT8 704 aa11.56□□□□□ -0.56
VRK3-202ENST00000377011 REEP4Q9H6H4 257 aa11.56□□□□□ -0.56
VRK3-202ENST00000377011 ENAMQ9NRM1 1142 aa11.56□□□□□ -0.56
VRK3-202ENST00000377011 ISPDA4D126 451 aa11.55□□□□□ -0.56
VRK3-202ENST00000377011 ARRDC5A6NEK1 342 aa11.55□□□□□ -0.56
VRK3-202ENST00000377011 FOXS1O43638 330 aa11.55□□□□□ -0.56
VRK3-202ENST00000377011 PCDH7O60245 1069 aa11.55□□□□□ -0.56
VRK3-202ENST00000377011 FADS2O95864 444 aaKnown RBP11.55□□□□□ -0.56
VRK3-202ENST00000377011 ITGB2P05107 769 aa11.55□□□□□ -0.56
VRK3-202ENST00000377011 CD40LGP29965 261 aa11.55□□□□□ -0.56
VRK3-202ENST00000377011 HSD17B2P37059 387 aa11.55□□□□□ -0.56
VRK3-202ENST00000377011 TGFBR2P37173 567 aa11.55□□□□□ -0.56
VRK3-202ENST00000377011 MAP2K4P45985 399 aa11.55□□□□□ -0.56
VRK3-202ENST00000377011 DCDP81605 110 aaKnown RBP11.55□□□□□ -0.56
VRK3-202ENST00000377011 IL1RL1Q01638 556 aa11.55□□□□□ -0.56
VRK3-202ENST00000377011 IFI44LQ53G44 452 aa11.55□□□□□ -0.56
VRK3-202ENST00000377011 TOR1AIP1Q5JTV8 583 aa11.55□□□□□ -0.56
VRK3-202ENST00000377011 GCNT6Q5T4J0 391 aa11.55□□□□□ -0.56
VRK3-202ENST00000377011 ADNP2Q6IQ32 1131 aa11.55□□□□□ -0.56
VRK3-202ENST00000377011 SLCO4C1Q6ZQN7 724 aa11.55□□□□□ -0.56
VRK3-202ENST00000377011 LAPTM4BQ86VI4 370 aa11.55□□□□□ -0.56
VRK3-202ENST00000377011 CCDC71Q8IV32 467 aaPredicted RBP11.55□□□□□ -0.56
VRK3-202ENST00000377011 PRSS58Q8IYP2 241 aa11.55□□□□□ -0.56
VRK3-202ENST00000377011 CSNK1A1LQ8N752 337 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms