RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 TDGQ13569 410 aa18.88■□□□□ 0.61
VSX1-202ENST00000376709 INAQ16352 499 aa18.88■□□□□ 0.61
VSX1-202ENST00000376709 SNAPC1Q16533 368 aa18.88■□□□□ 0.61
VSX1-202ENST00000376709 SOWAHCQ53LP3 525 aaPredicted RBP18.88■□□□□ 0.61
VSX1-202ENST00000376709 CCNJQ5T5M9 372 aa18.88■□□□□ 0.61
VSX1-202ENST00000376709 KIF18BQ86Y91 864 aa18.88■□□□□ 0.61
VSX1-202ENST00000376709 SHISA5Q8N114 240 aa18.88■□□□□ 0.61
VSX1-202ENST00000376709 MFSD4AQ8N468 514 aa18.88■□□□□ 0.61
VSX1-202ENST00000376709 FAM26EQ8N5C1 309 aa18.88■□□□□ 0.61
VSX1-202ENST00000376709 FAM160A2Q8N612 972 aaPredicted RBP18.88■□□□□ 0.61
VSX1-202ENST00000376709 RLN3Q8WXF3 142 aa18.88■□□□□ 0.61
VSX1-202ENST00000376709 FAM46AQ96IP4 442 aaKnown RBP18.88■□□□□ 0.61
VSX1-202ENST00000376709 LRR1Q96L50 414 aa18.88■□□□□ 0.61
VSX1-202ENST00000376709 SLC6A18Q96N87 628 aa18.88■□□□□ 0.61
VSX1-202ENST00000376709 MCHR1Q99705 422 aa18.88■□□□□ 0.61
VSX1-202ENST00000376709 PLA2G12AQ9BZM1 189 aa18.88■□□□□ 0.61
VSX1-202ENST00000376709 ANKRD19PQ9H560 264 aa18.88■□□□□ 0.61
VSX1-202ENST00000376709 ANKHQ9HCJ1 492 aa18.88■□□□□ 0.61
VSX1-202ENST00000376709 OR5K3A6NET4 321 aa18.88■□□□□ 0.61
VSX1-202ENST00000376709 GALR3O60755 368 aaPredicted RBP18.88■□□□□ 0.61
VSX1-202ENST00000376709 ATP1B1P05026 303 aa18.88■□□□□ 0.61
VSX1-202ENST00000376709 RAB15P59190 212 aa18.88■□□□□ 0.61
VSX1-202ENST00000376709 NCF4Q15080 339 aa18.88■□□□□ 0.61
VSX1-202ENST00000376709 GPR68Q15743 365 aa18.88■□□□□ 0.61
VSX1-202ENST00000376709 TIMM50Q3ZCQ8 353 aa18.88■□□□□ 0.61
VSX1-202ENST00000376709 ZNF404Q494X3 552 aa18.88■□□□□ 0.61
VSX1-202ENST00000376709 SLC27A4Q6P1M0 643 aa18.88■□□□□ 0.61
VSX1-202ENST00000376709 PRICKLE2Q7Z3G6 844 aa18.88■□□□□ 0.61
VSX1-202ENST00000376709 C11orf74Q86VG3 221 aa18.88■□□□□ 0.61
VSX1-202ENST00000376709 AMER2Q8N7J2 671 aa18.88■□□□□ 0.61
VSX1-202ENST00000376709 TMEM52Q8NDY8 209 aa18.88■□□□□ 0.61
VSX1-202ENST00000376709 PIGXQ8TBF5 258 aa18.88■□□□□ 0.61
VSX1-202ENST00000376709 CENPOQ9BU64 300 aa18.88■□□□□ 0.61
VSX1-202ENST00000376709 WSB2Q9NYS7 404 aaPredicted RBP18.88■□□□□ 0.61
VSX1-202ENST00000376709 NTNG1Q9Y2I2 539 aa18.88■□□□□ 0.61
VSX1-202ENST00000376709 TRIOBPQ9H2D6 2365 aa18.87■□□□□ 0.61
VSX1-202ENST00000376709 B4DGG1 531 aa18.87■□□□□ 0.61
VSX1-202ENST00000376709 CBFA2T3O75081 653 aa18.87■□□□□ 0.61
VSX1-202ENST00000376709 NTN1O95631 604 aa18.87■□□□□ 0.61
VSX1-202ENST00000376709 CKMT1AP12532 417 aa18.87■□□□□ 0.61
VSX1-202ENST00000376709 BLKP51451 505 aa18.87■□□□□ 0.61
VSX1-202ENST00000376709 MLLT1Q03111 559 aaPredicted RBP18.87■□□□□ 0.61
VSX1-202ENST00000376709 TSPAN31Q12999 210 aa18.87■□□□□ 0.61
VSX1-202ENST00000376709 SYT14P1Q58G82 188 aa18.87■□□□□ 0.61
VSX1-202ENST00000376709 ZNF836Q6ZNA1 936 aa18.87■□□□□ 0.61
VSX1-202ENST00000376709 ZDHHC1Q8WTX9 485 aa18.87■□□□□ 0.61
VSX1-202ENST00000376709 SDF2Q99470 211 aa18.87■□□□□ 0.61
VSX1-202ENST00000376709 MND1Q9BWT6 205 aa18.87■□□□□ 0.61
VSX1-202ENST00000376709 TPSD1Q9BZJ3 242 aa18.87■□□□□ 0.61
VSX1-202ENST00000376709 DSN1Q9H410 356 aa18.87■□□□□ 0.61
VSX1-202ENST00000376709 PIGUQ9H490 435 aa18.87■□□□□ 0.61
VSX1-202ENST00000376709 RNF167Q9H6Y7 350 aa18.87■□□□□ 0.61
VSX1-202ENST00000376709 CLEC2DQ9UHP7 191 aa18.87■□□□□ 0.61
VSX1-202ENST00000376709 PCDHGA3Q9Y5H0 932 aa18.87■□□□□ 0.61
VSX1-202ENST00000376709 CYR61O00622 381 aa18.86■□□□□ 0.61
VSX1-202ENST00000376709 GPR75O95800 540 aa18.86■□□□□ 0.61
VSX1-202ENST00000376709 SOX18P35713 384 aa18.86■□□□□ 0.61
VSX1-202ENST00000376709 RHAGQ02094 409 aa18.86■□□□□ 0.61
VSX1-202ENST00000376709 SYT13Q7L8C5 426 aa18.86■□□□□ 0.61
VSX1-202ENST00000376709 ZNF554Q86TJ5 538 aa18.86■□□□□ 0.61
VSX1-202ENST00000376709 PARGQ86W56 976 aa18.86■□□□□ 0.61
VSX1-202ENST00000376709 KLHDC7BQ96G42 594 aa18.86■□□□□ 0.61
VSX1-202ENST00000376709 GAS2L1Q99501 681 aaPredicted RBP18.86■□□□□ 0.61
VSX1-202ENST00000376709 C6orf62Q9GZU0 229 aaPredicted RBP18.86■□□□□ 0.61
VSX1-202ENST00000376709 MMP27Q9H306 513 aa18.86■□□□□ 0.61
VSX1-202ENST00000376709 LMAN1LQ9HAT1 526 aa18.86■□□□□ 0.61
VSX1-202ENST00000376709 GON4LQ3T8J9 2241 aa18.86■□□□□ 0.61
VSX1-202ENST00000376709 SGK494L7N484 410 aa18.86■□□□□ 0.61
VSX1-202ENST00000376709 ARHGAP33O14559 1287 aa18.86■□□□□ 0.61
VSX1-202ENST00000376709 HNRNPCP07910 306 aaKnown RBP eCLIP18.86■□□□□ 0.61
VSX1-202ENST00000376709 ALOX5P09917 674 aa18.86■□□□□ 0.61
VSX1-202ENST00000376709 GAS6Q14393 721 aa18.86■□□□□ 0.61
VSX1-202ENST00000376709 DEFB110Q30KQ9 67 aa18.86■□□□□ 0.61
VSX1-202ENST00000376709 EIPR1Q53HC9 387 aa18.86■□□□□ 0.61
VSX1-202ENST00000376709 FHL5Q5TD97 284 aa18.86■□□□□ 0.61
VSX1-202ENST00000376709 NKAIN4Q8IVV8 208 aa18.86■□□□□ 0.61
VSX1-202ENST00000376709 CA13Q8N1Q1 262 aa18.86■□□□□ 0.61
VSX1-202ENST00000376709 COX18Q8N8Q8 333 aa18.86■□□□□ 0.61
VSX1-202ENST00000376709 ACOT11Q8WXI4 607 aaPredicted RBP18.86■□□□□ 0.61
VSX1-202ENST00000376709 SLC41A3Q96GZ6 507 aa18.86■□□□□ 0.61
VSX1-202ENST00000376709 SAP130Q9H0E3 1048 aa18.86■□□□□ 0.61
VSX1-202ENST00000376709 A0A087WV62 115 aa18.85■□□□□ 0.61
VSX1-202ENST00000376709 A0A1W2PPC4 97 aa18.85■□□□□ 0.61
VSX1-202ENST00000376709 RPS3AP61247 264 aaKnown RBP18.85■□□□□ 0.61
VSX1-202ENST00000376709 MAP4K2Q12851 820 aa18.85■□□□□ 0.61
VSX1-202ENST00000376709 DUSP8Q13202 625 aa18.85■□□□□ 0.61
VSX1-202ENST00000376709 SPHARQ15513 63 aa18.85■□□□□ 0.61
VSX1-202ENST00000376709 PERM1Q5SV97 790 aa18.85■□□□□ 0.61
VSX1-202ENST00000376709 SLC25A30Q5SVS4 291 aa18.85■□□□□ 0.61
VSX1-202ENST00000376709 DCST2Q5T1A1 773 aa18.85■□□□□ 0.61
VSX1-202ENST00000376709 GDF7Q7Z4P5 450 aa18.85■□□□□ 0.61
VSX1-202ENST00000376709 CDRT4Q8N9R6 151 aa18.85■□□□□ 0.61
VSX1-202ENST00000376709 TSTD1Q8NFU3 115 aa18.85■□□□□ 0.61
VSX1-202ENST00000376709 ZNF582Q96NG8 517 aaPredicted RBP18.85■□□□□ 0.61
VSX1-202ENST00000376709 OPALINQ96PE5 141 aa18.85■□□□□ 0.61
VSX1-202ENST00000376709 IL21RQ9HBE5 538 aa18.85■□□□□ 0.61
VSX1-202ENST00000376709 AGAP5A6NIR3 686 aa18.85■□□□□ 0.61
VSX1-202ENST00000376709 MYL12BO14950 172 aa18.85■□□□□ 0.61
VSX1-202ENST00000376709 HCRTR1O43613 425 aa18.85■□□□□ 0.61
VSX1-202ENST00000376709 PLOD3O60568 738 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms