RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 ZNF431Q8TF32 576 aaPredicted RBP13.53□□□□□ -0.24
TNFRSF1B-201ENST00000376259 TMEM106CQ9BVX2 250 aa13.53□□□□□ -0.24
TNFRSF1B-201ENST00000376259 ZNF717Q9BY31 904 aaPredicted RBP13.53□□□□□ -0.24
TNFRSF1B-201ENST00000376259 NCKAP1Q9Y2A7 1128 aa13.53□□□□□ -0.24
TNFRSF1B-201ENST00000376259 NAALAD2Q9Y3Q0 740 aa13.53□□□□□ -0.24
TNFRSF1B-201ENST00000376259 CHST10O43529 356 aa13.52□□□□□ -0.24
TNFRSF1B-201ENST00000376259 TYRP1P17643 537 aa13.52□□□□□ -0.24
TNFRSF1B-201ENST00000376259 ACSL1P33121 698 aa13.52□□□□□ -0.24
TNFRSF1B-201ENST00000376259 PSPHP78330 225 aa13.52□□□□□ -0.24
TNFRSF1B-201ENST00000376259 FABP5Q01469 135 aa13.52□□□□□ -0.24
TNFRSF1B-201ENST00000376259 ILKQ13418 452 aa13.52□□□□□ -0.24
TNFRSF1B-201ENST00000376259 TOMM5Q8N4H5 51 aa13.52□□□□□ -0.24
TNFRSF1B-201ENST00000376259 TMEM255BQ8WV15 326 aa13.52□□□□□ -0.24
TNFRSF1B-201ENST00000376259 LYSMD1Q96S90 227 aa13.52□□□□□ -0.24
TNFRSF1B-201ENST00000376259 DPCDQ9BVM2 203 aaPredicted RBP13.52□□□□□ -0.24
TNFRSF1B-201ENST00000376259 GPR174Q9BXC1 333 aa13.52□□□□□ -0.24
TNFRSF1B-201ENST00000376259 ZDHHC5Q9C0B5 715 aa13.52□□□□□ -0.24
TNFRSF1B-201ENST00000376259 PPIEQ9UNP9 301 aaKnown RBP13.52□□□□□ -0.24
TNFRSF1B-201ENST00000376259 A0A0C4DFX4 3053 aa13.52□□□□□ -0.24
TNFRSF1B-201ENST00000376259 BPTFQ12830 3046 aa13.52□□□□□ -0.25
TNFRSF1B-201ENST00000376259 RIIAD1A6NNX1 92 aa13.52□□□□□ -0.25
TNFRSF1B-201ENST00000376259 KIAA0355O15063 1070 aa13.52□□□□□ -0.25
TNFRSF1B-201ENST00000376259 CSF3P09919 207 aa13.52□□□□□ -0.25
TNFRSF1B-201ENST00000376259 TRIM23P36406 574 aa13.52□□□□□ -0.25
TNFRSF1B-201ENST00000376259 HCCSP53701 268 aa13.52□□□□□ -0.25
TNFRSF1B-201ENST00000376259 RGS1Q08116 209 aa13.52□□□□□ -0.25
TNFRSF1B-201ENST00000376259 CHMP1BQ7LBR1 199 aa13.52□□□□□ -0.25
TNFRSF1B-201ENST00000376259 SPRED2Q7Z698 418 aa13.52□□□□□ -0.25
TNFRSF1B-201ENST00000376259 TSEN54Q7Z6J9 526 aaKnown RBP13.52□□□□□ -0.25
TNFRSF1B-201ENST00000376259 UBQLNLQ8IYU4 475 aa13.52□□□□□ -0.25
TNFRSF1B-201ENST00000376259 SLC16A11Q8NCK7 471 aa13.52□□□□□ -0.25
TNFRSF1B-201ENST00000376259 CDS1Q92903 461 aa13.52□□□□□ -0.25
TNFRSF1B-201ENST00000376259 EFHD2Q96C19 240 aaPredicted RBP13.52□□□□□ -0.25
TNFRSF1B-201ENST00000376259 CD180Q99467 661 aa13.52□□□□□ -0.25
TNFRSF1B-201ENST00000376259 PSD2Q9BQI7 771 aa13.52□□□□□ -0.25
TNFRSF1B-201ENST00000376259 GSDMCQ9BYG8 508 aa13.52□□□□□ -0.25
TNFRSF1B-201ENST00000376259 SRMSQ9H3Y6 488 aa13.52□□□□□ -0.25
TNFRSF1B-201ENST00000376259 ATP13A2Q9NQ11 1180 aa13.52□□□□□ -0.25
TNFRSF1B-201ENST00000376259 RASD1Q9Y272 281 aa13.52□□□□□ -0.25
TNFRSF1B-201ENST00000376259 GRIP1Q9Y3R0 1128 aa13.52□□□□□ -0.25
TNFRSF1B-201ENST00000376259 CHD5Q8TDI0 1954 aa13.52□□□□□ -0.25
TNFRSF1B-201ENST00000376259 TSPAN4O14817 238 aa13.52□□□□□ -0.25
TNFRSF1B-201ENST00000376259 KCNJ5P48544 419 aa13.52□□□□□ -0.25
TNFRSF1B-201ENST00000376259 GNG2P59768 71 aa13.52□□□□□ -0.25
TNFRSF1B-201ENST00000376259 ARPC4P59998 168 aa13.52□□□□□ -0.25
TNFRSF1B-201ENST00000376259 RPA4Q13156 261 aa13.52□□□□□ -0.25
TNFRSF1B-201ENST00000376259 ADAM15Q13444 863 aa13.52□□□□□ -0.25
TNFRSF1B-201ENST00000376259 DEFB110Q30KQ9 67 aa13.52□□□□□ -0.25
TNFRSF1B-201ENST00000376259 TP53I3Q53FA7 332 aa13.52□□□□□ -0.25
TNFRSF1B-201ENST00000376259 OTPQ5XKR4 325 aa13.52□□□□□ -0.25
TNFRSF1B-201ENST00000376259 OR4K13Q8NH42 304 aa13.52□□□□□ -0.25
TNFRSF1B-201ENST00000376259 ZMYND19Q96E35 227 aaPredicted RBP13.52□□□□□ -0.25
TNFRSF1B-201ENST00000376259 NDOR1Q9UHB4 597 aa13.52□□□□□ -0.25
TNFRSF1B-201ENST00000376259 AK6Q9Y3D8 172 aaKnown RBP13.52□□□□□ -0.25
TNFRSF1B-201ENST00000376259 A0A0G2JMP0 313 aa13.51□□□□□ -0.25
TNFRSF1B-201ENST00000376259 A0A0X1KG70 313 aa13.51□□□□□ -0.25
TNFRSF1B-201ENST00000376259 H0YC42 278 aa13.51□□□□□ -0.25
TNFRSF1B-201ENST00000376259 H3BQ06 376 aaPredicted RBP13.51□□□□□ -0.25
TNFRSF1B-201ENST00000376259 PRODHO43272 600 aa13.51□□□□□ -0.25
TNFRSF1B-201ENST00000376259 CTSAP10619 480 aa13.51□□□□□ -0.25
TNFRSF1B-201ENST00000376259 PVRP15151 417 aa13.51□□□□□ -0.25
TNFRSF1B-201ENST00000376259 PSMB10P40306 273 aa13.51□□□□□ -0.25
TNFRSF1B-201ENST00000376259 MLLT11Q13015 90 aaPredicted RBP13.51□□□□□ -0.25
TNFRSF1B-201ENST00000376259 ELAVL3Q14576 367 aaKnown RBP13.51□□□□□ -0.25
TNFRSF1B-201ENST00000376259 DPPA4Q7L190 304 aa13.51□□□□□ -0.25
TNFRSF1B-201ENST00000376259 PIAS4Q8N2W9 510 aaPredicted RBP13.51□□□□□ -0.25
TNFRSF1B-201ENST00000376259 OR2T33Q8NG76 320 aa13.51□□□□□ -0.25
TNFRSF1B-201ENST00000376259 OR4M2Q8NGB6 313 aa13.51□□□□□ -0.25
TNFRSF1B-201ENST00000376259 C17orf50Q8WW18 174 aa13.51□□□□□ -0.25
TNFRSF1B-201ENST00000376259 PDXPQ96GD0 296 aa13.51□□□□□ -0.25
TNFRSF1B-201ENST00000376259 ZNF559Q9BR84 538 aa13.51□□□□□ -0.25
TNFRSF1B-201ENST00000376259 KATNB1Q9BVA0 655 aa13.51□□□□□ -0.25
TNFRSF1B-201ENST00000376259 TBC1D24Q9ULP9 559 aa13.51□□□□□ -0.25
TNFRSF1B-201ENST00000376259 SPACA6W5XKT8 324 aa13.51□□□□□ -0.25
TNFRSF1B-201ENST00000376259 WDR87Q6ZQQ6 2873 aa13.51□□□□□ -0.25
TNFRSF1B-201ENST00000376259 SCN10AQ9Y5Y9 1956 aa13.51□□□□□ -0.25
TNFRSF1B-201ENST00000376259 GABRPO00591 440 aa13.51□□□□□ -0.25
TNFRSF1B-201ENST00000376259 ADRA2AP08913 450 aa13.51□□□□□ -0.25
TNFRSF1B-201ENST00000376259 BMPR1AP36894 532 aa13.51□□□□□ -0.25
TNFRSF1B-201ENST00000376259 CLDN12P56749 244 aa13.51□□□□□ -0.25
TNFRSF1B-201ENST00000376259 NTRK2Q16620 822 aa13.51□□□□□ -0.25
TNFRSF1B-201ENST00000376259 ACBD7Q8N6N7 88 aa13.51□□□□□ -0.25
TNFRSF1B-201ENST00000376259 TP53I13Q8NBR0 393 aaPredicted RBP13.51□□□□□ -0.25
TNFRSF1B-201ENST00000376259 SLC7A6Q92536 515 aa13.51□□□□□ -0.25
TNFRSF1B-201ENST00000376259 GCDHQ92947 438 aaPredicted RBP13.51□□□□□ -0.25
TNFRSF1B-201ENST00000376259 NARS2Q96I59 477 aaKnown RBP13.51□□□□□ -0.25
TNFRSF1B-201ENST00000376259 PLCXD1Q9NUJ7 323 aa13.51□□□□□ -0.25
TNFRSF1B-201ENST00000376259 GNG8Q9UK08 70 aa13.51□□□□□ -0.25
TNFRSF1B-201ENST00000376259 RAD1O60671 282 aa13.51□□□□□ -0.25
TNFRSF1B-201ENST00000376259 STX11O75558 287 aa13.51□□□□□ -0.25
TNFRSF1B-201ENST00000376259 CHRM4P08173 479 aa13.51□□□□□ -0.25
TNFRSF1B-201ENST00000376259 SLC35G6P0C7Q6 338 aa13.51□□□□□ -0.25
TNFRSF1B-201ENST00000376259 CHRNB1P11230 501 aa13.51□□□□□ -0.25
TNFRSF1B-201ENST00000376259 GSTM3P21266 225 aa13.51□□□□□ -0.25
TNFRSF1B-201ENST00000376259 KIR2DL3P43628 341 aa13.51□□□□□ -0.25
TNFRSF1B-201ENST00000376259 RHAGQ02094 409 aa13.51□□□□□ -0.25
TNFRSF1B-201ENST00000376259 ENTPD8Q5MY95 495 aa13.51□□□□□ -0.25
TNFRSF1B-201ENST00000376259 SLX4IPQ5VYV7 408 aa13.51□□□□□ -0.25
TNFRSF1B-201ENST00000376259 XKRXQ6PP77 449 aa13.51□□□□□ -0.25
TNFRSF1B-201ENST00000376259 CCDC190Q86UF4 302 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms