RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 PIPP12273 146 aaPredicted RBP11.3□□□□□ -0.6
HMGCL-202ENST00000374487 GSTM3P21266 225 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 UGT2B10P36537 528 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 RANBP1P43487 201 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 RABIFP47224 123 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 CSNK1EP49674 416 aaKnown RBP11.3□□□□□ -0.6
HMGCL-202ENST00000374487 SNRPNP63162 240 aaKnown RBP11.3□□□□□ -0.6
HMGCL-202ENST00000374487 ALDH6A1Q02252 535 aaKnown RBP11.3□□□□□ -0.6
HMGCL-202ENST00000374487 RUNX2Q13950 521 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 COL9A2Q14055 689 aaPredicted RBP11.3□□□□□ -0.6
HMGCL-202ENST00000374487 INAQ16352 499 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 C1orf94Q6P1W5 598 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 CD300LDQ6UXZ3 194 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 OR4N4Q8N0Y3 316 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 IQCF1Q8N6M8 205 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 ZNF655Q8N720 491 aaPredicted RBP11.3□□□□□ -0.6
HMGCL-202ENST00000374487 SLC16A11Q8NCK7 471 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 OR6Q1Q8NGQ2 317 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 OR52P1PQ8NH57 321 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 C1orf216Q8TAB5 229 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 ZFPM2Q8WW38 1151 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 NR4A3Q92570 626 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 SLC35A4Q96G79 324 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 LOXL4Q96JB6 756 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 OR5M11Q96RB7 305 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 MGLLQ99685 303 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 PRR14Q9BWN1 585 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 SLIRPQ9GZT3 109 aaKnown RBP11.3□□□□□ -0.6
HMGCL-202ENST00000374487 SLC25A19Q9HC21 320 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 FBXO8Q9NRD0 319 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 HRASLS2Q9NWW9 162 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 MKLN1Q9UL63 735 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 ZNF232Q9UNY5 417 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 SPACA6W5XKT8 324 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 ZNF860A6NHJ4 632 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 CPSF4LA6NMK7 179 aaKnown RBP11.3□□□□□ -0.6
HMGCL-202ENST00000374487 FCMRO60667 390 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 CBFA2T3O75081 653 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 CYP7B1O75881 506 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 ZNF806P0C7X5 589 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 SMIM10L1P0DMW3 83 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 ALOX12P18054 663 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 SLC15A1P46059 708 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 GIPRP48546 466 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 PDX1P52945 283 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 LSM11P83369 360 aaKnown RBP eCLIP11.3□□□□□ -0.6
HMGCL-202ENST00000374487 BNC1Q01954 994 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 ST3GAL3Q11203 375 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 GINS1Q14691 196 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 TRAM2Q15035 370 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 CSRP2Q16527 193 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 ZNF542PQ5EBM4 170 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 MEDAGQ5VYS4 303 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 KIAA0895LQ68EN5 471 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 MFSD12Q6NUT3 480 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 FAM111BQ6SJ93 734 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 ZNF730Q6ZMV8 503 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 DCDC5Q6ZRR9 648 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 SLC34A3Q8N130 599 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 CENPSQ8N2Z9 138 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 AMER2Q8N7J2 671 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 MORN4Q8NDC4 146 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 KBTBD8Q8NFY9 601 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 GIMAP5Q96F15 307 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 TMEM80Q96HE8 168 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 SMIM10Q96HG1 83 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 SLC6A18Q96N87 628 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 CHCHD6Q9BRQ6 235 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 GSDMCQ9BYG8 508 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 OR51E2Q9H255 320 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 ANKHQ9HCJ1 492 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 POT1Q9NUX5 634 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 FAIMQ9NVQ4 179 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 PILRAQ9UKJ1 303 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 ENTPD2Q9Y5L3 495 aa11.3□□□□□ -0.6
HMGCL-202ENST00000374487 SNRNP200O75643 2136 aaKnown RBP11.29□□□□□ -0.6
HMGCL-202ENST00000374487 MDC1Q14676 2089 aaKnown RBP11.29□□□□□ -0.6
HMGCL-202ENST00000374487 ADAMTS9Q9P2N4 1935 aa11.29□□□□□ -0.6
HMGCL-202ENST00000374487 H0YGG7 62 aa11.29□□□□□ -0.6
HMGCL-202ENST00000374487 AP3D1O14617 1153 aa11.29□□□□□ -0.6
HMGCL-202ENST00000374487 ZSCAN9O15535 394 aaPredicted RBP11.29□□□□□ -0.6
HMGCL-202ENST00000374487 WNT1P04628 370 aa11.29□□□□□ -0.6
HMGCL-202ENST00000374487 DBTP11182 482 aaKnown RBP11.29□□□□□ -0.6
HMGCL-202ENST00000374487 PVRP15151 417 aa11.29□□□□□ -0.6
HMGCL-202ENST00000374487 PORP16435 677 aaPredicted RBP11.29□□□□□ -0.6
HMGCL-202ENST00000374487 PRKAR1BP31321 381 aa11.29□□□□□ -0.6
HMGCL-202ENST00000374487 CSTF2P33240 577 aaKnown RBP eCLIP11.29□□□□□ -0.6
HMGCL-202ENST00000374487 PCYT1AP49585 367 aa11.29□□□□□ -0.6
HMGCL-202ENST00000374487 SMSP52788 366 aa11.29□□□□□ -0.6
HMGCL-202ENST00000374487 RGS8P57771 180 aaPredicted RBP11.29□□□□□ -0.6
HMGCL-202ENST00000374487 ARF3P61204 181 aaPredicted RBP11.29□□□□□ -0.6
HMGCL-202ENST00000374487 TSTQ16762 297 aaKnown RBP11.29□□□□□ -0.6
HMGCL-202ENST00000374487 TIMM50Q3ZCQ8 353 aa11.29□□□□□ -0.6
HMGCL-202ENST00000374487 ZNF404Q494X3 552 aa11.29□□□□□ -0.6
HMGCL-202ENST00000374487 TMEM201Q5SNT2 666 aa11.29□□□□□ -0.6
HMGCL-202ENST00000374487 CDC73Q6P1J9 531 aa11.29□□□□□ -0.6
HMGCL-202ENST00000374487 BTLAQ7Z6A9 289 aa11.29□□□□□ -0.6
HMGCL-202ENST00000374487 TAF8Q7Z7C8 310 aa11.29□□□□□ -0.6
HMGCL-202ENST00000374487 CADM4Q8NFZ8 388 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms