RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 RAET1LQ5VY80 246 aa12.43□□□□□ -0.42
CXCL12-202ENST00000374426 ZNF550Q7Z398 422 aa12.43□□□□□ -0.42
CXCL12-202ENST00000374426 ZNF572Q7Z3I7 529 aaPredicted RBP12.43□□□□□ -0.42
CXCL12-202ENST00000374426 MEIOBQ8N635 442 aa12.43□□□□□ -0.42
CXCL12-202ENST00000374426 CDYL2Q8N8U2 506 aa12.43□□□□□ -0.42
CXCL12-202ENST00000374426 OR2M3Q8NG83 312 aa12.43□□□□□ -0.42
CXCL12-202ENST00000374426 OR7G2Q8NG99 324 aa12.43□□□□□ -0.42
CXCL12-202ENST00000374426 FNDC9Q8TBE3 224 aa12.43□□□□□ -0.42
CXCL12-202ENST00000374426 MTBPQ96DY7 904 aa12.43□□□□□ -0.42
CXCL12-202ENST00000374426 PERPQ96FX8 193 aa12.43□□□□□ -0.42
CXCL12-202ENST00000374426 MDFIQ99750 246 aa12.43□□□□□ -0.42
CXCL12-202ENST00000374426 BDH2Q9BUT1 245 aa12.43□□□□□ -0.42
CXCL12-202ENST00000374426 FUT8Q9BYC5 575 aa12.43□□□□□ -0.42
CXCL12-202ENST00000374426 ACPTQ9BZG2 426 aa12.43□□□□□ -0.42
CXCL12-202ENST00000374426 DSN1Q9H410 356 aa12.43□□□□□ -0.42
CXCL12-202ENST00000374426 RNF122Q9H9V4 155 aa12.43□□□□□ -0.42
CXCL12-202ENST00000374426 ELOVL5Q9NYP7 299 aa12.43□□□□□ -0.42
CXCL12-202ENST00000374426 PPP4R1LQ9P1A2 415 aa12.43□□□□□ -0.42
CXCL12-202ENST00000374426 ZNF337Q9Y3M9 751 aa12.43□□□□□ -0.42
CXCL12-202ENST00000374426 C16orf97H3BN30 126 aa12.42□□□□□ -0.42
CXCL12-202ENST00000374426 EMC8O43402 210 aa12.42□□□□□ -0.42
CXCL12-202ENST00000374426 SCO2O43819 266 aa12.42□□□□□ -0.42
CXCL12-202ENST00000374426 PCDH7O60245 1069 aa12.42□□□□□ -0.42
CXCL12-202ENST00000374426 FADS1O60427 444 aa12.42□□□□□ -0.42
CXCL12-202ENST00000374426 CD8BP10966 210 aa12.42□□□□□ -0.42
CXCL12-202ENST00000374426 PSG6Q00889 435 aa12.42□□□□□ -0.42
CXCL12-202ENST00000374426 CLCQ05315 142 aa12.42□□□□□ -0.42
CXCL12-202ENST00000374426 CSTF3Q12996 717 aaKnown RBP12.42□□□□□ -0.42
CXCL12-202ENST00000374426 GUSBP1Q15486 140 aa12.42□□□□□ -0.42
CXCL12-202ENST00000374426 C20orf204Q6ZNR8 217 aa12.42□□□□□ -0.42
CXCL12-202ENST00000374426 RELL1Q8IUW5 271 aa12.42□□□□□ -0.42
CXCL12-202ENST00000374426 SAMD14Q8IZD0 417 aaPredicted RBP12.42□□□□□ -0.42
CXCL12-202ENST00000374426 ZNF610Q8N9Z0 462 aa12.42□□□□□ -0.42
CXCL12-202ENST00000374426 ZC3HAV1LQ96H79 300 aaKnown RBP12.42□□□□□ -0.42
CXCL12-202ENST00000374426 ZNF845Q96IR2 970 aaPredicted RBP12.42□□□□□ -0.42
CXCL12-202ENST00000374426 PAFAH2Q99487 392 aa12.42□□□□□ -0.42
CXCL12-202ENST00000374426 SLC39A3Q9BRY0 314 aa12.42□□□□□ -0.42
CXCL12-202ENST00000374426 PINK1Q9BXM7 581 aa12.42□□□□□ -0.42
CXCL12-202ENST00000374426 RTN4RQ9BZR6 473 aa12.42□□□□□ -0.42
CXCL12-202ENST00000374426 SLC35C2Q9NQQ7 365 aa12.42□□□□□ -0.42
CXCL12-202ENST00000374426 TAS2R9Q9NYW1 312 aa12.42□□□□□ -0.42
CXCL12-202ENST00000374426 FLRT3Q9NZU0 649 aa12.42□□□□□ -0.42
CXCL12-202ENST00000374426 MED11Q9P086 117 aa12.42□□□□□ -0.42
CXCL12-202ENST00000374426 OR10H1Q9Y4A9 318 aa12.42□□□□□ -0.42
CXCL12-202ENST00000374426 RAI1Q7Z5J4 1906 aaPredicted RBP12.42□□□□□ -0.42
CXCL12-202ENST00000374426 PRR14LQ5THK1 2151 aa12.42□□□□□ -0.42
CXCL12-202ENST00000374426 RTTNQ86VV8 2226 aa12.41□□□□□ -0.42
CXCL12-202ENST00000374426 GNG14A0A1W2PPG7 69 aa12.41□□□□□ -0.42
CXCL12-202ENST00000374426 OR2M5A3KFT3 312 aa12.41□□□□□ -0.42
CXCL12-202ENST00000374426 TRIM49D1C9J1S8 452 aa12.41□□□□□ -0.42
CXCL12-202ENST00000374426 SEC14L5O43304 696 aa12.41□□□□□ -0.42
CXCL12-202ENST00000374426 KRT6AP02538 564 aa12.41□□□□□ -0.42
CXCL12-202ENST00000374426 KRT6BP04259 564 aa12.41□□□□□ -0.42
CXCL12-202ENST00000374426 HK1P19367 917 aa12.41□□□□□ -0.42
CXCL12-202ENST00000374426 CASQ1P31415 396 aa12.41□□□□□ -0.42
CXCL12-202ENST00000374426 KCNJ5P48544 419 aa12.41□□□□□ -0.42
CXCL12-202ENST00000374426 KRT6CP48668 564 aa12.41□□□□□ -0.42
CXCL12-202ENST00000374426 HTR6P50406 440 aa12.41□□□□□ -0.42
CXCL12-202ENST00000374426 SERPINB9P50453 376 aa12.41□□□□□ -0.42
CXCL12-202ENST00000374426 CLDN20P56880 219 aa12.41□□□□□ -0.42
CXCL12-202ENST00000374426 EEFSECP57772 596 aaKnown RBP12.41□□□□□ -0.42
CXCL12-202ENST00000374426 MRPS22P82650 360 aaKnown RBP12.41□□□□□ -0.42
CXCL12-202ENST00000374426 ZNF155Q12901 538 aaPredicted RBP12.41□□□□□ -0.42
CXCL12-202ENST00000374426 HEPACAMQ14CZ8 416 aa12.41□□□□□ -0.42
CXCL12-202ENST00000374426 PON3Q15166 354 aa12.41□□□□□ -0.42
CXCL12-202ENST00000374426 RASA2Q15283 850 aa12.41□□□□□ -0.42
CXCL12-202ENST00000374426 UNC50Q53HI1 259 aa12.41□□□□□ -0.42
CXCL12-202ENST00000374426 FAM9CQ8IZT9 166 aa12.41□□□□□ -0.42
CXCL12-202ENST00000374426 OR5M1Q8NGP8 315 aa12.41□□□□□ -0.42
CXCL12-202ENST00000374426 C16orf78Q8WTQ4 265 aa12.41□□□□□ -0.42
CXCL12-202ENST00000374426 IGFBPL1Q8WX77 278 aa12.41□□□□□ -0.42
CXCL12-202ENST00000374426 C11orf24Q96F05 449 aaPredicted RBP12.41□□□□□ -0.42
CXCL12-202ENST00000374426 APIPQ96GX9 242 aa12.41□□□□□ -0.42
CXCL12-202ENST00000374426 ZNF382Q96SR6 550 aa12.41□□□□□ -0.42
CXCL12-202ENST00000374426 GSX2Q9BZM3 304 aa12.41□□□□□ -0.42
CXCL12-202ENST00000374426 STMN4Q9H169 189 aaPredicted RBP12.41□□□□□ -0.42
CXCL12-202ENST00000374426 CDC42EP4Q9H3Q1 356 aaKnown RBP12.41□□□□□ -0.42
CXCL12-202ENST00000374426 PCNX3Q9H6A9 2034 aa12.41□□□□□ -0.42
CXCL12-202ENST00000374426 GIMAP4Q9NUV9 329 aa12.41□□□□□ -0.42
CXCL12-202ENST00000374426 SENP1Q9P0U3 644 aa12.41□□□□□ -0.42
CXCL12-202ENST00000374426 ZNF175Q9Y473 711 aa12.41□□□□□ -0.42
CXCL12-202ENST00000374426 HEATR5AQ86XA9 2040 aa12.4□□□□□ -0.42
CXCL12-202ENST00000374426 H3BML4 177 aa12.4□□□□□ -0.42
CXCL12-202ENST00000374426 LINC01387J3KSC0 135 aa12.4□□□□□ -0.42
CXCL12-202ENST00000374426 ULK1O75385 1050 aa12.4□□□□□ -0.42
CXCL12-202ENST00000374426 AQP8O94778 261 aa12.4□□□□□ -0.42
CXCL12-202ENST00000374426 SUPT7LO94864 414 aa12.4□□□□□ -0.42
CXCL12-202ENST00000374426 TIA1P31483 386 aaKnown RBP eCLIP12.4□□□□□ -0.42
CXCL12-202ENST00000374426 MPIP34949 423 aa12.4□□□□□ -0.42
CXCL12-202ENST00000374426 ACSM2AQ08AH3 577 aa12.4□□□□□ -0.42
CXCL12-202ENST00000374426 STX5Q13190 355 aa12.4□□□□□ -0.42
CXCL12-202ENST00000374426 FGFBP1Q14512 234 aa12.4□□□□□ -0.42
CXCL12-202ENST00000374426 GANABQ14697 944 aaKnown RBP12.4□□□□□ -0.42
CXCL12-202ENST00000374426 PRSS53Q2L4Q9 553 aa12.4□□□□□ -0.42
CXCL12-202ENST00000374426 CYP27C1Q4G0S4 372 aa12.4□□□□□ -0.42
CXCL12-202ENST00000374426 SPIN4Q56A73 249 aa12.4□□□□□ -0.42
CXCL12-202ENST00000374426 SH2D4BQ5SQS7 431 aa12.4□□□□□ -0.42
CXCL12-202ENST00000374426 ZNF678Q5SXM1 525 aa12.4□□□□□ -0.42
CXCL12-202ENST00000374426 ACSM2BQ68CK6 577 aa12.4□□□□□ -0.42
CXCL12-202ENST00000374426 ANKRD34AQ69YU3 496 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms