RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 ATCAYQ86WG3 371 aa14.92□□□□□ -0.02
CNKSR1-202ENST00000374253 OR2L13Q8N349 312 aa14.92□□□□□ -0.02
CNKSR1-202ENST00000374253 CRELD1Q96HD1 420 aa14.92□□□□□ -0.02
CNKSR1-202ENST00000374253 CNPPD1Q9BV87 410 aa14.92□□□□□ -0.02
CNKSR1-202ENST00000374253 WDR12Q9GZL7 423 aaKnown RBP14.92□□□□□ -0.02
CNKSR1-202ENST00000374253 SAP130Q9H0E3 1048 aa14.92□□□□□ -0.02
CNKSR1-202ENST00000374253 PRAMEF26H0Y7S4 382 aa14.91□□□□□ -0.02
CNKSR1-202ENST00000374253 BOLA2-SMG1P6H3BVE0 249 aa14.91□□□□□ -0.02
CNKSR1-202ENST00000374253 AP3D1O14617 1153 aa14.91□□□□□ -0.02
CNKSR1-202ENST00000374253 GPX5O75715 221 aa14.91□□□□□ -0.02
CNKSR1-202ENST00000374253 HBQ1P09105 142 aa14.91□□□□□ -0.02
CNKSR1-202ENST00000374253 ZNF12P17014 697 aa14.91□□□□□ -0.02
CNKSR1-202ENST00000374253 RABIFP47224 123 aa14.91□□□□□ -0.02
CNKSR1-202ENST00000374253 UBE2IP63279 158 aaKnown RBP14.91□□□□□ -0.02
CNKSR1-202ENST00000374253 HHEXQ03014 270 aa14.91□□□□□ -0.02
CNKSR1-202ENST00000374253 FBXO43Q4G163 708 aa14.91□□□□□ -0.02
CNKSR1-202ENST00000374253 USP43Q70EL4 1123 aa14.91□□□□□ -0.02
CNKSR1-202ENST00000374253 ABI3BPQ7Z7G0 1075 aa14.91□□□□□ -0.02
CNKSR1-202ENST00000374253 OR9A4Q8NGU2 314 aa14.91□□□□□ -0.02
CNKSR1-202ENST00000374253 ZNF582Q96NG8 517 aaPredicted RBP14.91□□□□□ -0.02
CNKSR1-202ENST00000374253 CDADC1Q9BWV3 514 aa14.91□□□□□ -0.02
CNKSR1-202ENST00000374253 HHATLQ9HCP6 504 aa14.91□□□□□ -0.02
CNKSR1-202ENST00000374253 FBXO8Q9NRD0 319 aa14.91□□□□□ -0.02
CNKSR1-202ENST00000374253 NDOR1Q9UHB4 597 aa14.91□□□□□ -0.02
CNKSR1-202ENST00000374253 SLC7A7Q9UM01 511 aa14.91□□□□□ -0.02
CNKSR1-202ENST00000374253 URADA6NGE7 173 aa14.91□□□□□ -0.02
CNKSR1-202ENST00000374253 METTL15A6NJ78 407 aa14.91□□□□□ -0.02
CNKSR1-202ENST00000374253 CCRL2O00421 344 aa14.91□□□□□ -0.02
CNKSR1-202ENST00000374253 KPNA4O00629 521 aaPredicted RBP14.91□□□□□ -0.02
CNKSR1-202ENST00000374253 ASNA1O43681 348 aa14.91□□□□□ -0.02
CNKSR1-202ENST00000374253 MAZP56270 477 aaKnown RBP14.91□□□□□ -0.02
CNKSR1-202ENST00000374253 TRAM2Q15035 370 aa14.91□□□□□ -0.02
CNKSR1-202ENST00000374253 TRIM16LQ309B1 348 aa14.91□□□□□ -0.02
CNKSR1-202ENST00000374253 ZNF628Q5EBL2 1059 aa14.91□□□□□ -0.02
CNKSR1-202ENST00000374253 LIPKQ5VXJ0 399 aa14.91□□□□□ -0.02
CNKSR1-202ENST00000374253 GDF7Q7Z4P5 450 aa14.91□□□□□ -0.02
CNKSR1-202ENST00000374253 AVL9Q8NBF6 648 aa14.91□□□□□ -0.02
CNKSR1-202ENST00000374253 TEX47Q8TBZ9 253 aa14.91□□□□□ -0.02
CNKSR1-202ENST00000374253 GPR151Q8TDV0 419 aa14.91□□□□□ -0.02
CNKSR1-202ENST00000374253 CHPT1Q8WUD6 406 aa14.91□□□□□ -0.02
CNKSR1-202ENST00000374253 TMEM203Q969S6 136 aa14.91□□□□□ -0.02
CNKSR1-202ENST00000374253 TRMT61AQ96FX7 289 aaKnown RBP14.91□□□□□ -0.02
CNKSR1-202ENST00000374253 DACH2Q96NX9 599 aa14.91□□□□□ -0.02
CNKSR1-202ENST00000374253 NECTIN4Q96NY8 510 aa14.91□□□□□ -0.02
CNKSR1-202ENST00000374253 SDF2Q99470 211 aa14.91□□□□□ -0.02
CNKSR1-202ENST00000374253 KCNS3Q9BQ31 491 aa14.91□□□□□ -0.02
CNKSR1-202ENST00000374253 GSDMCQ9BYG8 508 aa14.91□□□□□ -0.02
CNKSR1-202ENST00000374253 MIR1-1HGQ9H1L0 117 aa14.91□□□□□ -0.02
CNKSR1-202ENST00000374253 QPCTLQ9NXS2 382 aa14.91□□□□□ -0.02
CNKSR1-202ENST00000374253 KLHL28Q9NXS3 571 aa14.91□□□□□ -0.02
CNKSR1-202ENST00000374253 RPL36Q9Y3U8 105 aaKnown RBP14.91□□□□□ -0.02
CNKSR1-202ENST00000374253 MTCH2Q9Y6C9 303 aa14.91□□□□□ -0.02
CNKSR1-202ENST00000374253 TRIOBPQ9H2D6 2365 aa14.9□□□□□ -0.02
CNKSR1-202ENST00000374253 SPTY2D1-AS1A0A0U1RR47 76 aa14.9□□□□□ -0.02
CNKSR1-202ENST00000374253 MAOBP27338 520 aa14.9□□□□□ -0.02
CNKSR1-202ENST00000374253 CSTF2P33240 577 aaKnown RBP eCLIP14.9□□□□□ -0.02
CNKSR1-202ENST00000374253 ETV5P41161 510 aa14.9□□□□□ -0.02
CNKSR1-202ENST00000374253 TGM4P49221 684 aa14.9□□□□□ -0.02
CNKSR1-202ENST00000374253 ETV1P50549 477 aa14.9□□□□□ -0.02
CNKSR1-202ENST00000374253 CDK5Q00535 292 aa14.9□□□□□ -0.02
CNKSR1-202ENST00000374253 SFSWAPQ12872 951 aaKnown RBP14.9□□□□□ -0.02
CNKSR1-202ENST00000374253 SPHARQ15513 63 aa14.9□□□□□ -0.02
CNKSR1-202ENST00000374253 HEPHL1Q6MZM0 1159 aa14.9□□□□□ -0.02
CNKSR1-202ENST00000374253 USP53Q70EK8 1073 aa14.9□□□□□ -0.02
CNKSR1-202ENST00000374253 DRAXINQ8NBI3 349 aaPredicted RBP14.9□□□□□ -0.02
CNKSR1-202ENST00000374253 C9orf43Q8TAL5 461 aaPredicted RBP14.9□□□□□ -0.02
CNKSR1-202ENST00000374253 OTULINQ96BN8 352 aa14.9□□□□□ -0.02
CNKSR1-202ENST00000374253 SLC41A3Q96GZ6 507 aa14.9□□□□□ -0.02
CNKSR1-202ENST00000374253 POLR2J2Q9GZM3 115 aaKnown RBP14.9□□□□□ -0.02
CNKSR1-202ENST00000374253 ABCB10Q9NRK6 738 aa14.9□□□□□ -0.02
CNKSR1-202ENST00000374253 POT1Q9NUX5 634 aa14.9□□□□□ -0.02
CNKSR1-202ENST00000374253 USP36Q9P275 1121 aaKnown RBP14.9□□□□□ -0.02
CNKSR1-202ENST00000374253 KCNE5Q9UJ90 142 aa14.9□□□□□ -0.02
CNKSR1-202ENST00000374253 HS3ST3A1Q9Y663 406 aa14.9□□□□□ -0.02
CNKSR1-202ENST00000374253 CFAP54Q96N23 3096 aa14.9□□□□□ -0.02
CNKSR1-202ENST00000374253 COL4A2P08572 1712 aa14.9□□□□□ -0.02
CNKSR1-202ENST00000374253 A0A0J9YY10 115 aa14.9□□□□□ -0.02
CNKSR1-202ENST00000374253 GXYLT2A0PJZ3 443 aa14.9□□□□□ -0.02
CNKSR1-202ENST00000374253 DUXAA6NLW8 204 aa14.9□□□□□ -0.02
CNKSR1-202ENST00000374253 SLC2A10O95528 541 aa14.9□□□□□ -0.02
CNKSR1-202ENST00000374253 OMPP47874 163 aa14.9□□□□□ -0.02
CNKSR1-202ENST00000374253 ST3GAL3Q11203 375 aa14.9□□□□□ -0.02
CNKSR1-202ENST00000374253 COX10Q12887 443 aa14.9□□□□□ -0.02
CNKSR1-202ENST00000374253 ERV3-1Q14264 604 aa14.9□□□□□ -0.02
CNKSR1-202ENST00000374253 TMEM201Q5SNT2 666 aa14.9□□□□□ -0.02
CNKSR1-202ENST00000374253 OR2G6Q5TZ20 316 aa14.9□□□□□ -0.02
CNKSR1-202ENST00000374253 KIAA0895LQ68EN5 471 aa14.9□□□□□ -0.02
CNKSR1-202ENST00000374253 ZAR1Q86SH2 424 aa14.9□□□□□ -0.02
CNKSR1-202ENST00000374253 PEX5LQ8IYB4 626 aa14.9□□□□□ -0.02
CNKSR1-202ENST00000374253 METTL27Q8N6F8 245 aaPredicted RBP14.9□□□□□ -0.02
CNKSR1-202ENST00000374253 ZNF614Q8N883 585 aa14.9□□□□□ -0.02
CNKSR1-202ENST00000374253 OR52I1Q8NGK6 324 aa14.9□□□□□ -0.02
CNKSR1-202ENST00000374253 S100ZQ8WXG8 99 aa14.9□□□□□ -0.02
CNKSR1-202ENST00000374253 POLDIP3Q9BY77 421 aaKnown RBP14.9□□□□□ -0.02
CNKSR1-202ENST00000374253 PALMDQ9NP74 551 aa14.9□□□□□ -0.02
CNKSR1-202ENST00000374253 CALML5Q9NZT1 146 aa14.9□□□□□ -0.02
CNKSR1-202ENST00000374253 LSM2Q9Y333 95 aaKnown RBP14.9□□□□□ -0.02
CNKSR1-202ENST00000374253 SYT5O00445 386 aa14.89□□□□□ -0.03
CNKSR1-202ENST00000374253 CYR61O00622 381 aa14.89□□□□□ -0.03
CNKSR1-202ENST00000374253 CDC42EP2O14613 210 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms