RNA–Protein interactions for RNA: ENST00000373583.5

HDAC8-208, Transcript of histone deacetylase 8, humanhuman

TSL 5 BASIC

Gene HDAC8, Length 434 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-208ENST00000373583 GIMAP5Q96F15 307 aa14.55□□□□□ -0.08
HDAC8-208ENST00000373583 PRPF18Q99633 342 aaKnown RBP14.55□□□□□ -0.08
HDAC8-208ENST00000373583 OR2B2Q9GZK3 357 aa14.55□□□□□ -0.08
HDAC8-208ENST00000373583 SIRT3Q9NTG7 399 aaPredicted RBP14.55□□□□□ -0.08
HDAC8-208ENST00000373583 C15orf38-AP3S2A0A0A6YYH1 394 aa14.54□□□□□ -0.08
HDAC8-208ENST00000373583 A0A1W2PRB8 838 aa14.54□□□□□ -0.08
HDAC8-208ENST00000373583 EMC8O43402 210 aa14.54□□□□□ -0.08
HDAC8-208ENST00000373583 SNNO75324 88 aaPredicted RBP14.54□□□□□ -0.08
HDAC8-208ENST00000373583 TRAPPC6AO75865 159 aa14.54□□□□□ -0.08
HDAC8-208ENST00000373583 NKX2-2O95096 273 aa14.54□□□□□ -0.08
HDAC8-208ENST00000373583 LAMP1P11279 417 aa14.54□□□□□ -0.08
HDAC8-208ENST00000373583 G6PDP11413 515 aa14.54□□□□□ -0.08
HDAC8-208ENST00000373583 GRNP28799 593 aaKnown RBP14.54□□□□□ -0.08
HDAC8-208ENST00000373583 CHRNB4P30926 498 aa14.54□□□□□ -0.08
HDAC8-208ENST00000373583 CLDN8P56748 225 aa14.54□□□□□ -0.08
HDAC8-208ENST00000373583 NUP107P57740 925 aa14.54□□□□□ -0.08
HDAC8-208ENST00000373583 MAGOHP61326 146 aaKnown RBP14.54□□□□□ -0.08
HDAC8-208ENST00000373583 PRR5P85299 388 aa14.54□□□□□ -0.08
HDAC8-208ENST00000373583 EXOSC6Q5RKV6 272 aaKnown RBP14.54□□□□□ -0.08
HDAC8-208ENST00000373583 C1orf185Q5T7R7 199 aa14.54□□□□□ -0.08
HDAC8-208ENST00000373583 CPTPQ5TA50 214 aa14.54□□□□□ -0.08
HDAC8-208ENST00000373583 VASNQ6EMK4 673 aa14.54□□□□□ -0.08
HDAC8-208ENST00000373583 MFSD12Q6NUT3 480 aa14.54□□□□□ -0.08
HDAC8-208ENST00000373583 ZCCHC12Q6PEW1 402 aa14.54□□□□□ -0.08
HDAC8-208ENST00000373583 WDR53Q7Z5U6 358 aaPredicted RBP14.54□□□□□ -0.08
HDAC8-208ENST00000373583 PM20D2Q8IYS1 436 aa14.54□□□□□ -0.08
HDAC8-208ENST00000373583 ULK2Q8IYT8 1036 aa14.54□□□□□ -0.08
HDAC8-208ENST00000373583 FAM83FQ8NEG4 500 aaPredicted RBP14.54□□□□□ -0.08
HDAC8-208ENST00000373583 FAM120BQ96EK7 910 aaKnown RBP14.54□□□□□ -0.08
HDAC8-208ENST00000373583 PAIP2Q9BPZ3 127 aaKnown RBP14.54□□□□□ -0.08
HDAC8-208ENST00000373583 TTYH2Q9BSA4 534 aa14.54□□□□□ -0.08
HDAC8-208ENST00000373583 BHLHE41Q9C0J9 482 aaPredicted RBP14.54□□□□□ -0.08
HDAC8-208ENST00000373583 PRDM14Q9GZV8 571 aa14.54□□□□□ -0.08
HDAC8-208ENST00000373583 AKTIPQ9H8T0 292 aa14.54□□□□□ -0.08
HDAC8-208ENST00000373583 MEAF6Q9HAF1 191 aa14.54□□□□□ -0.08
HDAC8-208ENST00000373583 NEUROD4Q9HD90 331 aa14.54□□□□□ -0.08
HDAC8-208ENST00000373583 EQTNQ9NQ60 294 aa14.54□□□□□ -0.08
HDAC8-208ENST00000373583 SERHLQ9NQF3 203 aa14.54□□□□□ -0.08
HDAC8-208ENST00000373583 FAM120CQ9NX05 1096 aaKnown RBP14.54□□□□□ -0.08
HDAC8-208ENST00000373583 CACNA1DQ01668 2161 aa14.54□□□□□ -0.08
HDAC8-208ENST00000373583 ADGRG4Q8IZF6 3080 aa14.53□□□□□ -0.08
HDAC8-208ENST00000373583 DOCK7Q96N67 2140 aa14.53□□□□□ -0.08
HDAC8-208ENST00000373583 PCNX3Q9H6A9 2034 aa14.53□□□□□ -0.08
HDAC8-208ENST00000373583 FAM47E-STBD1D6RA91 191 aa14.53□□□□□ -0.08
HDAC8-208ENST00000373583 HNRNPRO43390 633 aaKnown RBP14.53□□□□□ -0.08
HDAC8-208ENST00000373583 FADS1O60427 444 aa14.53□□□□□ -0.08
HDAC8-208ENST00000373583 KCNH1O95259 989 aa14.53□□□□□ -0.08
HDAC8-208ENST00000373583 EIPR1Q53HC9 387 aa14.53□□□□□ -0.08
HDAC8-208ENST00000373583 SP5Q6BEB4 398 aaPredicted RBP14.53□□□□□ -0.08
HDAC8-208ENST00000373583 KRTCAP2Q8N6L1 136 aa14.53□□□□□ -0.08
HDAC8-208ENST00000373583 CA5BP1Q8WTZ4 195 aa14.53□□□□□ -0.08
HDAC8-208ENST00000373583 OR5P2Q8WZ92 322 aa14.53□□□□□ -0.08
HDAC8-208ENST00000373583 TIMP4Q99727 224 aa14.53□□□□□ -0.08
HDAC8-208ENST00000373583 THAP1Q9NVV9 213 aa14.53□□□□□ -0.08
HDAC8-208ENST00000373583 GIN1Q9NXP7 522 aa14.53□□□□□ -0.08
HDAC8-208ENST00000373583 NKIRAS1Q9NYS0 192 aa14.53□□□□□ -0.08
HDAC8-208ENST00000373583 RNF6Q9Y252 685 aa14.53□□□□□ -0.08
HDAC8-208ENST00000373583 MRPS18CQ9Y3D5 142 aaKnown RBP14.53□□□□□ -0.08
HDAC8-208ENST00000373583 MED12Q93074 2177 aa14.53□□□□□ -0.08
HDAC8-208ENST00000373583 C2orf72A6NCS6 295 aa14.52□□□□□ -0.09
HDAC8-208ENST00000373583 AHRRA9YTQ3 701 aa14.52□□□□□ -0.09
HDAC8-208ENST00000373583 ACTL6AO96019 429 aa14.52□□□□□ -0.09
HDAC8-208ENST00000373583 GLI4P10075 376 aa14.52□□□□□ -0.09
HDAC8-208ENST00000373583 ACP2P11117 423 aa14.52□□□□□ -0.09
HDAC8-208ENST00000373583 EFNA1P20827 205 aaPredicted RBP14.52□□□□□ -0.09
HDAC8-208ENST00000373583 SRD5A2P31213 254 aa14.52□□□□□ -0.09
HDAC8-208ENST00000373583 GABRA3P34903 492 aa14.52□□□□□ -0.09
HDAC8-208ENST00000373583 GCKP35557 465 aa14.52□□□□□ -0.09
HDAC8-208ENST00000373583 PRIM2P49643 509 aa14.52□□□□□ -0.09
HDAC8-208ENST00000373583 PMPCAQ10713 525 aa14.52□□□□□ -0.09
HDAC8-208ENST00000373583 TOMM20Q15388 145 aa14.52□□□□□ -0.09
HDAC8-208ENST00000373583 LSM12Q3MHD2 195 aaKnown RBP14.52□□□□□ -0.09
HDAC8-208ENST00000373583 WIPI1Q5MNZ9 446 aaPredicted RBP14.52□□□□□ -0.09
HDAC8-208ENST00000373583 AGBL2Q5U5Z8 902 aa14.52□□□□□ -0.09
HDAC8-208ENST00000373583 OGFOD2Q6N063 350 aa14.52□□□□□ -0.09
HDAC8-208ENST00000373583 SZRD1Q7Z422 152 aa14.52□□□□□ -0.09
HDAC8-208ENST00000373583 TRIM42Q8IWZ5 723 aa14.52□□□□□ -0.09
HDAC8-208ENST00000373583 FADS6Q8N9I5 356 aa14.52□□□□□ -0.09
HDAC8-208ENST00000373583 SFXN5Q8TD22 340 aa14.52□□□□□ -0.09
HDAC8-208ENST00000373583 GPR151Q8TDV0 419 aa14.52□□□□□ -0.09
HDAC8-208ENST00000373583 RMND5BQ96G75 393 aaPredicted RBP14.52□□□□□ -0.09
HDAC8-208ENST00000373583 PPP1R36Q96LQ0 422 aa14.52□□□□□ -0.09
HDAC8-208ENST00000373583 DUSP26Q9BV47 211 aa14.52□□□□□ -0.09
HDAC8-208ENST00000373583 UGT2B28Q9BY64 529 aa14.52□□□□□ -0.09
HDAC8-208ENST00000373583 NUF2Q9BZD4 464 aa14.52□□□□□ -0.09
HDAC8-208ENST00000373583 DUSP22Q9NRW4 184 aa14.52□□□□□ -0.09
HDAC8-208ENST00000373583 ZCCHC3Q9NUD5 404 aaKnown RBP14.52□□□□□ -0.09
HDAC8-208ENST00000373583 SLC6A5Q9Y345 797 aa14.52□□□□□ -0.09
HDAC8-208ENST00000373583 KIAA1549Q9HCM3 1950 aa14.52□□□□□ -0.09
HDAC8-208ENST00000373583 PKDREJQ9NTG1 2253 aa14.52□□□□□ -0.09
HDAC8-208ENST00000373583 GXYLT2A0PJZ3 443 aa14.51□□□□□ -0.09
HDAC8-208ENST00000373583 B4DXG7 233 aa14.51□□□□□ -0.09
HDAC8-208ENST00000373583 NGFRP08138 427 aa14.51□□□□□ -0.09
HDAC8-208ENST00000373583 BMP7P18075 431 aa14.51□□□□□ -0.09
HDAC8-208ENST00000373583 LBPP18428 481 aa14.51□□□□□ -0.09
HDAC8-208ENST00000373583 LCN1P31025 176 aa14.51□□□□□ -0.09
HDAC8-208ENST00000373583 PRKAG1P54619 331 aa14.51□□□□□ -0.09
HDAC8-208ENST00000373583 DIO3P55073 304 aa14.51□□□□□ -0.09
HDAC8-208ENST00000373583 GANABQ14697 944 aaKnown RBP14.51□□□□□ -0.09
HDAC8-208ENST00000373583 SF3B4Q15427 424 aaKnown RBP eCLIP14.51□□□□□ -0.094e-73■■■■■ 236.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms