RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 NXF5Q9H1B4 397 aaKnown RBP17.47■□□□□ 0.39
TRAPPC3-204ENST00000373166 CALHM2Q9HA72 323 aa17.47■□□□□ 0.39
TRAPPC3-204ENST00000373166 JKAMPQ9P055 326 aa17.47■□□□□ 0.39
TRAPPC3-204ENST00000373166 TMED5Q9Y3A6 229 aa17.47■□□□□ 0.39
TRAPPC3-204ENST00000373166 ACTL7BQ9Y614 415 aa17.47■□□□□ 0.39
TRAPPC3-204ENST00000373166 MYO1GB0I1T2 1018 aa17.46■□□□□ 0.39
TRAPPC3-204ENST00000373166 LSM1O15116 133 aaKnown RBP17.46■□□□□ 0.39
TRAPPC3-204ENST00000373166 ACOX3O15254 700 aa17.46■□□□□ 0.39
TRAPPC3-204ENST00000373166 SLITRK5O94991 958 aa17.46■□□□□ 0.39
TRAPPC3-204ENST00000373166 SNX4O95219 450 aa17.46■□□□□ 0.39
TRAPPC3-204ENST00000373166 HPNP05981 417 aa17.46■□□□□ 0.39
TRAPPC3-204ENST00000373166 ABCD3P28288 659 aa17.46■□□□□ 0.39
TRAPPC3-204ENST00000373166 NCBP2P52298 156 aaKnown RBP eCLIP17.46■□□□□ 0.391e-7■■■□□ 16.3
TRAPPC3-204ENST00000373166 FBXW4P57775 412 aa17.46■□□□□ 0.39
TRAPPC3-204ENST00000373166 PLCXD2Q0VAA5 305 aa17.46■□□□□ 0.39
TRAPPC3-204ENST00000373166 GALNTL6Q49A17 601 aa17.46■□□□□ 0.39
TRAPPC3-204ENST00000373166 NHSL2Q5HYW2 709 aa17.46■□□□□ 0.39
TRAPPC3-204ENST00000373166 Q6ZSR9 355 aa17.46■□□□□ 0.39
TRAPPC3-204ENST00000373166 PACS2Q86VP3 889 aa17.46■□□□□ 0.39
TRAPPC3-204ENST00000373166 PRIMA1Q86XR5 153 aa17.46■□□□□ 0.39
TRAPPC3-204ENST00000373166 P3H2Q8IVL5 708 aa17.46■□□□□ 0.39
TRAPPC3-204ENST00000373166 PRR22Q8IZ63 422 aa17.46■□□□□ 0.39
TRAPPC3-204ENST00000373166 SIMC1Q8NDZ2 872 aa17.46■□□□□ 0.39
TRAPPC3-204ENST00000373166 SMPDL3BQ92485 455 aa17.46■□□□□ 0.39
TRAPPC3-204ENST00000373166 FCRL1Q96LA6 429 aa17.46■□□□□ 0.39
TRAPPC3-204ENST00000373166 SECISBP2Q96T21 854 aaKnown RBP17.46■□□□□ 0.39
TRAPPC3-204ENST00000373166 MDFIQ99750 246 aa17.46■□□□□ 0.39
TRAPPC3-204ENST00000373166 TAS2R7Q9NYW3 318 aa17.46■□□□□ 0.39
TRAPPC3-204ENST00000373166 SLC6A5Q9Y345 797 aa17.46■□□□□ 0.39
TRAPPC3-204ENST00000373166 JMJD1CQ15652 2540 aa17.45■□□□□ 0.38
TRAPPC3-204ENST00000373166 WDR91A4D1P6 747 aa17.45■□□□□ 0.38
TRAPPC3-204ENST00000373166 FRG2CA6NGY1 282 aa17.45■□□□□ 0.38
TRAPPC3-204ENST00000373166 CASKO14936 926 aa17.45■□□□□ 0.38
TRAPPC3-204ENST00000373166 BIRC5O15392 142 aa17.45■□□□□ 0.38
TRAPPC3-204ENST00000373166 COQ9O75208 318 aa17.45■□□□□ 0.38
TRAPPC3-204ENST00000373166 ERN1O75460 977 aaKnown RBP17.45■□□□□ 0.38
TRAPPC3-204ENST00000373166 HSPA4LO95757 839 aa17.45■□□□□ 0.38
TRAPPC3-204ENST00000373166 JUNP05412 331 aaKnown RBP17.45■□□□□ 0.38
TRAPPC3-204ENST00000373166 SDC1P18827 310 aa17.45■□□□□ 0.38
TRAPPC3-204ENST00000373166 MAPK1P28482 360 aa17.45■□□□□ 0.38
TRAPPC3-204ENST00000373166 SOX18P35713 384 aa17.45■□□□□ 0.38
TRAPPC3-204ENST00000373166 MASP1P48740 699 aa17.45■□□□□ 0.38
TRAPPC3-204ENST00000373166 EMDP50402 254 aa17.45■□□□□ 0.38
TRAPPC3-204ENST00000373166 RCAN2Q14206 197 aa17.45■□□□□ 0.38
TRAPPC3-204ENST00000373166 TOMM20Q15388 145 aa17.45■□□□□ 0.38
TRAPPC3-204ENST00000373166 UGT3A2Q3SY77 523 aa17.45■□□□□ 0.38
TRAPPC3-204ENST00000373166 CXorf67Q86X51 503 aaPredicted RBP17.45■□□□□ 0.38
TRAPPC3-204ENST00000373166 SPPL2AQ8TCT8 520 aa17.45■□□□□ 0.38
TRAPPC3-204ENST00000373166 ZBTB9Q96C00 473 aa17.45■□□□□ 0.38
TRAPPC3-204ENST00000373166 WDYHV1Q96HA8 205 aa17.45■□□□□ 0.38
TRAPPC3-204ENST00000373166 PPP3R2Q96LZ3 170 aa17.45■□□□□ 0.38
TRAPPC3-204ENST00000373166 RILPQ96NA2 401 aa17.45■□□□□ 0.38
TRAPPC3-204ENST00000373166 GNRHR2Q96P88 292 aa17.45■□□□□ 0.38
TRAPPC3-204ENST00000373166 RBM24Q9BX46 236 aaKnown RBP17.45■□□□□ 0.38
TRAPPC3-204ENST00000373166 UBQLN3Q9H347 655 aa17.45■□□□□ 0.38
TRAPPC3-204ENST00000373166 KCNK9Q9NPC2 374 aa17.45■□□□□ 0.38
TRAPPC3-204ENST00000373166 EML6Q6ZMW3 1958 aa17.45■□□□□ 0.38
TRAPPC3-204ENST00000373166 EXPH5Q8NEV8 1989 aa17.44■□□□□ 0.38
TRAPPC3-204ENST00000373166 KIAA1324LA8MWY0 1029 aaPredicted RBP17.44■□□□□ 0.38
TRAPPC3-204ENST00000373166 TMEM114B3SHH9 223 aa17.44■□□□□ 0.38
TRAPPC3-204ENST00000373166 PLOD3O60568 738 aa17.44■□□□□ 0.38
TRAPPC3-204ENST00000373166 SKAP2O75563 359 aaPredicted RBP17.44■□□□□ 0.38
TRAPPC3-204ENST00000373166 PPM1BO75688 479 aa17.44■□□□□ 0.38
TRAPPC3-204ENST00000373166 SERPINE1P05121 402 aa17.44■□□□□ 0.38
TRAPPC3-204ENST00000373166 TMIGD3P0DMS9 266 aaPredicted RBP17.44■□□□□ 0.38
TRAPPC3-204ENST00000373166 NAGAP17050 411 aa17.44■□□□□ 0.38
TRAPPC3-204ENST00000373166 BMP7P18075 431 aa17.44■□□□□ 0.38
TRAPPC3-204ENST00000373166 DRD5P21918 477 aa17.44■□□□□ 0.38
TRAPPC3-204ENST00000373166 ARRB2P32121 409 aa17.44■□□□□ 0.38
TRAPPC3-204ENST00000373166 PPICP45877 212 aa17.44■□□□□ 0.38
TRAPPC3-204ENST00000373166 PSPHP78330 225 aa17.44■□□□□ 0.38
TRAPPC3-204ENST00000373166 ZNF155Q12901 538 aaPredicted RBP17.44■□□□□ 0.38
TRAPPC3-204ENST00000373166 CHI3L2Q15782 390 aa17.44■□□□□ 0.38
TRAPPC3-204ENST00000373166 RFTN2Q52LD8 501 aaPredicted RBP17.44■□□□□ 0.38
TRAPPC3-204ENST00000373166 XKR7Q5GH72 579 aa17.44■□□□□ 0.38
TRAPPC3-204ENST00000373166 TNFAIP8L3Q5GJ75 292 aa17.44■□□□□ 0.38
TRAPPC3-204ENST00000373166 Q5PR19 223 aa17.44■□□□□ 0.38
TRAPPC3-204ENST00000373166 OR7G2Q8NG99 324 aa17.44■□□□□ 0.38
TRAPPC3-204ENST00000373166 OR6Y1Q8NGX8 325 aa17.44■□□□□ 0.38
TRAPPC3-204ENST00000373166 ABTB1Q969K4 478 aaPredicted RBP17.44■□□□□ 0.38
TRAPPC3-204ENST00000373166 GFM2Q969S9 779 aaKnown RBP17.44■□□□□ 0.38
TRAPPC3-204ENST00000373166 OMA1Q96E52 524 aa17.44■□□□□ 0.38
TRAPPC3-204ENST00000373166 ZNF764Q96H86 408 aaPredicted RBP17.44■□□□□ 0.38
TRAPPC3-204ENST00000373166 COX4I2Q96KJ9 171 aa17.44■□□□□ 0.38
TRAPPC3-204ENST00000373166 EGLN2Q96KS0 407 aa17.44■□□□□ 0.38
TRAPPC3-204ENST00000373166 TSSK3Q96PN8 268 aa17.44■□□□□ 0.38
TRAPPC3-204ENST00000373166 UGT2B28Q9BY64 529 aa17.44■□□□□ 0.38
TRAPPC3-204ENST00000373166 ANGPTL4Q9BY76 406 aa17.44■□□□□ 0.38
TRAPPC3-204ENST00000373166 ANKRA2Q9H9E1 313 aa17.44■□□□□ 0.38
TRAPPC3-204ENST00000373166 EXO1Q9UQ84 846 aaKnown RBP17.44■□□□□ 0.38
TRAPPC3-204ENST00000373166 EIF3LQ9Y262 564 aaKnown RBP17.44■□□□□ 0.38
TRAPPC3-204ENST00000373166 C15orf41Q9Y2V0 281 aa17.44■□□□□ 0.38
TRAPPC3-204ENST00000373166 FN1P02751 2386 aaKnown RBP17.43■□□□□ 0.38
TRAPPC3-204ENST00000373166 ARHGAP21Q5T5U3 1957 aa17.43■□□□□ 0.38
TRAPPC3-204ENST00000373166 A0A1W2PPR1 153 aa17.43■□□□□ 0.38
TRAPPC3-204ENST00000373166 SH3D21A4FU49 640 aa17.43■□□□□ 0.38
TRAPPC3-204ENST00000373166 PDPK1O15530 556 aa17.43■□□□□ 0.38
TRAPPC3-204ENST00000373166 DDX5P17844 614 aaKnown RBP17.43■□□□□ 0.38
TRAPPC3-204ENST00000373166 ASMTP46597 345 aa17.43■□□□□ 0.38
TRAPPC3-204ENST00000373166 CPA2P48052 419 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms