RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 COL28A1Q2UY09 1125 aa12.64□□□□□ -0.39
RAPGEF1-201ENST00000372189 CYP27C1Q4G0S4 372 aa12.64□□□□□ -0.39
RAPGEF1-201ENST00000372189 COQ5Q5HYK3 327 aa12.64□□□□□ -0.39
RAPGEF1-201ENST00000372189 ARHGAP11AQ6P4F7 1023 aa12.64□□□□□ -0.39
RAPGEF1-201ENST00000372189 PARS2Q7L3T8 475 aaKnown RBP12.64□□□□□ -0.39
RAPGEF1-201ENST00000372189 ZNF101Q8IZC7 436 aa12.64□□□□□ -0.39
RAPGEF1-201ENST00000372189 JAGN1Q8N5M9 183 aa12.64□□□□□ -0.39
RAPGEF1-201ENST00000372189 PIP5K1AQ99755 562 aa12.64□□□□□ -0.39
RAPGEF1-201ENST00000372189 TXLNGYQ9BZA5 131 aa12.64□□□□□ -0.39
RAPGEF1-201ENST00000372189 HHATLQ9HCP6 504 aa12.64□□□□□ -0.39
RAPGEF1-201ENST00000372189 DOC2AQ14183 400 aa12.64□□□□□ -0.39
RAPGEF1-201ENST00000372189 GINS1Q14691 196 aa12.64□□□□□ -0.39
RAPGEF1-201ENST00000372189 EXOC3L2Q2M3D2 409 aa12.64□□□□□ -0.39
RAPGEF1-201ENST00000372189 LCN8Q6JVE9 175 aa12.64□□□□□ -0.39
RAPGEF1-201ENST00000372189 PET117Q6UWS5 81 aa12.64□□□□□ -0.39
RAPGEF1-201ENST00000372189 OR6N1Q8NGY5 312 aa12.64□□□□□ -0.39
RAPGEF1-201ENST00000372189 OR2L8Q8NGY9 312 aa12.64□□□□□ -0.39
RAPGEF1-201ENST00000372189 NEIL3Q8TAT5 605 aa12.64□□□□□ -0.39
RAPGEF1-201ENST00000372189 NEDD4LQ96PU5 975 aa12.64□□□□□ -0.39
RAPGEF1-201ENST00000372189 IFT52Q9Y366 437 aa12.64□□□□□ -0.39
RAPGEF1-201ENST00000372189 PCDHGB5Q9Y5G0 923 aa12.64□□□□□ -0.39
RAPGEF1-201ENST00000372189 MYH11P35749 1972 aa12.64□□□□□ -0.39
RAPGEF1-201ENST00000372189 LOC100509620A0A075B734 347 aa12.64□□□□□ -0.39
RAPGEF1-201ENST00000372189 E7EQ34 232 aa12.64□□□□□ -0.39
RAPGEF1-201ENST00000372189 CD68P34810 354 aaPredicted RBP12.64□□□□□ -0.39
RAPGEF1-201ENST00000372189 IDH3GP51553 393 aaPredicted RBP12.64□□□□□ -0.39
RAPGEF1-201ENST00000372189 TMEM240Q5SV17 173 aa12.64□□□□□ -0.39
RAPGEF1-201ENST00000372189 LIPKQ5VXJ0 399 aa12.64□□□□□ -0.39
RAPGEF1-201ENST00000372189 ACVR1CQ8NER5 493 aa12.64□□□□□ -0.39
RAPGEF1-201ENST00000372189 NUP43Q8NFH3 380 aa12.64□□□□□ -0.39
RAPGEF1-201ENST00000372189 SLC2A9Q9NRM0 540 aa12.64□□□□□ -0.39
RAPGEF1-201ENST00000372189 TO15178 435 aa12.63□□□□□ -0.39
RAPGEF1-201ENST00000372189 EVI2BP34910 448 aa12.63□□□□□ -0.39
RAPGEF1-201ENST00000372189 CSNK1DP48730 415 aa12.63□□□□□ -0.39
RAPGEF1-201ENST00000372189 GRIN2CQ14957 1233 aa12.63□□□□□ -0.39
RAPGEF1-201ENST00000372189 IRF4Q15306 451 aa12.63□□□□□ -0.39
RAPGEF1-201ENST00000372189 GXYLT1Q4G148 440 aa12.63□□□□□ -0.39
RAPGEF1-201ENST00000372189 COL13A1Q5TAT6 717 aaPredicted RBP12.63□□□□□ -0.39
RAPGEF1-201ENST00000372189 STEAP4Q687X5 459 aa12.63□□□□□ -0.39
RAPGEF1-201ENST00000372189 OR52E8Q6IFG1 317 aa12.63□□□□□ -0.39
RAPGEF1-201ENST00000372189 ZNF550Q7Z398 422 aa12.63□□□□□ -0.39
RAPGEF1-201ENST00000372189 ZFAND4Q86XD8 727 aa12.63□□□□□ -0.39
RAPGEF1-201ENST00000372189 BBS10Q8TAM1 723 aa12.63□□□□□ -0.39
RAPGEF1-201ENST00000372189 CCDC120Q96HB5 630 aa12.63□□□□□ -0.39
RAPGEF1-201ENST00000372189 NSUN5Q96P11 429 aaKnown RBP12.63□□□□□ -0.39
RAPGEF1-201ENST00000372189 STUB1Q9UNE7 303 aa12.63□□□□□ -0.39
RAPGEF1-201ENST00000372189 DNMT3AQ9Y6K1 912 aaPredicted RBP12.63□□□□□ -0.39
RAPGEF1-201ENST00000372189 SLC1A7O00341 560 aa12.63□□□□□ -0.39
RAPGEF1-201ENST00000372189 CYTIPO60759 359 aa12.63□□□□□ -0.39
RAPGEF1-201ENST00000372189 TIMP2P16035 220 aa12.63□□□□□ -0.39
RAPGEF1-201ENST00000372189 SLC1A3P43003 542 aa12.63□□□□□ -0.39
RAPGEF1-201ENST00000372189 UNC50Q53HI1 259 aa12.63□□□□□ -0.39
RAPGEF1-201ENST00000372189 CMKLR1Q99788 373 aa12.63□□□□□ -0.39
RAPGEF1-201ENST00000372189 EMC8O43402 210 aa12.63□□□□□ -0.39
RAPGEF1-201ENST00000372189 FOXD2O60548 495 aaPredicted RBP12.63□□□□□ -0.39
RAPGEF1-201ENST00000372189 PMS2P3Q13401 168 aa12.63□□□□□ -0.39
RAPGEF1-201ENST00000372189 KIAA0895LQ68EN5 471 aa12.63□□□□□ -0.39
RAPGEF1-201ENST00000372189 HSD11B1LQ7Z5J1 315 aa12.63□□□□□ -0.39
RAPGEF1-201ENST00000372189 C12orf45Q8N5I9 185 aaPredicted RBP12.63□□□□□ -0.39
RAPGEF1-201ENST00000372189 SLC15A4Q8N697 577 aa12.63□□□□□ -0.39
RAPGEF1-201ENST00000372189 BEX1Q9HBH7 125 aa12.63□□□□□ -0.39
RAPGEF1-201ENST00000372189 CENPMQ9NSP4 180 aa12.63□□□□□ -0.39
RAPGEF1-201ENST00000372189 LAMP5Q9UJQ1 280 aa12.63□□□□□ -0.39
RAPGEF1-201ENST00000372189 SH2B3Q9UQQ2 575 aa12.63□□□□□ -0.39
RAPGEF1-201ENST00000372189 SPO11Q9Y5K1 396 aa12.63□□□□□ -0.39
RAPGEF1-201ENST00000372189 MYH4Q9Y623 1939 aa12.63□□□□□ -0.39
RAPGEF1-201ENST00000372189 EIF3FO00303 357 aaPredicted RBP12.63□□□□□ -0.39
RAPGEF1-201ENST00000372189 EEF1E1O43324 174 aaKnown RBP12.63□□□□□ -0.39
RAPGEF1-201ENST00000372189 NUAK1O60285 661 aa12.63□□□□□ -0.39
RAPGEF1-201ENST00000372189 BMP2P12643 396 aa12.63□□□□□ -0.39
RAPGEF1-201ENST00000372189 MLF2Q15773 248 aaPredicted RBP12.63□□□□□ -0.39
RAPGEF1-201ENST00000372189 BLOC1S3Q6QNY0 202 aa12.63□□□□□ -0.39
RAPGEF1-201ENST00000372189 LRFN5Q96NI6 719 aa12.63□□□□□ -0.39
RAPGEF1-201ENST00000372189 OPA3Q9H6K4 179 aa12.63□□□□□ -0.39
RAPGEF1-201ENST00000372189 CPNE5Q9HCH3 593 aa12.63□□□□□ -0.39
RAPGEF1-201ENST00000372189 USP36Q9P275 1121 aaKnown RBP12.63□□□□□ -0.39
RAPGEF1-201ENST00000372189 EPHA6Q9UF33 1036 aa12.63□□□□□ -0.39
RAPGEF1-201ENST00000372189 FUOMA2VDF0 154 aa12.63□□□□□ -0.39
RAPGEF1-201ENST00000372189 SHOXO15266 292 aa12.63□□□□□ -0.39
RAPGEF1-201ENST00000372189 DRD2P14416 443 aa12.63□□□□□ -0.39
RAPGEF1-201ENST00000372189 OR1E2P47887 323 aa12.63□□□□□ -0.39
RAPGEF1-201ENST00000372189 NKAPLQ5M9Q1 402 aa12.63□□□□□ -0.39
RAPGEF1-201ENST00000372189 UBQLNLQ8IYU4 475 aa12.63□□□□□ -0.39
RAPGEF1-201ENST00000372189 OR10R2Q8NGX6 335 aa12.63□□□□□ -0.39
RAPGEF1-201ENST00000372189 FANK1Q8TC84 345 aa12.63□□□□□ -0.39
RAPGEF1-201ENST00000372189 NXPE3Q969Y0 559 aa12.63□□□□□ -0.39
RAPGEF1-201ENST00000372189 PRR11Q96HE9 360 aaPredicted RBP12.63□□□□□ -0.39
RAPGEF1-201ENST00000372189 PELI2Q9HAT8 420 aa12.63□□□□□ -0.39
RAPGEF1-201ENST00000372189 GRHPRQ9UBQ7 328 aa12.63□□□□□ -0.39
RAPGEF1-201ENST00000372189 ENTPD2Q9Y5L3 495 aa12.63□□□□□ -0.39
RAPGEF1-201ENST00000372189 ZNF207O43670 478 aaKnown RBP12.62□□□□□ -0.39
RAPGEF1-201ENST00000372189 PRKYO43930 277 aa12.62□□□□□ -0.39
RAPGEF1-201ENST00000372189 SLC35E2BP0CK96 405 aa12.62□□□□□ -0.39
RAPGEF1-201ENST00000372189 CKMT1AP12532 417 aa12.62□□□□□ -0.39
RAPGEF1-201ENST00000372189 HSD17B1P14061 328 aa12.62□□□□□ -0.39
RAPGEF1-201ENST00000372189 CDK3Q00526 305 aa12.62□□□□□ -0.39
RAPGEF1-201ENST00000372189 FADDQ13158 208 aa12.62□□□□□ -0.39
RAPGEF1-201ENST00000372189 KCTD9Q7L273 389 aa12.62□□□□□ -0.39
RAPGEF1-201ENST00000372189 MTURNQ8N3F0 131 aa12.62□□□□□ -0.39
RAPGEF1-201ENST00000372189 RLN3Q8WXF3 142 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms