RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 ACOT11Q8WXI4 607 aaPredicted RBP27.04■■□□□ 1.92
SSBP3-204ENST00000371320 SP140LQ9H930 580 aa27.04■■□□□ 1.92
SSBP3-204ENST00000371320 CRNNQ9UBG3 495 aaPredicted RBP27.04■■□□□ 1.92
SSBP3-204ENST00000371320 GPR52Q9Y2T5 361 aa27.04■■□□□ 1.92
SSBP3-204ENST00000371320 SLC22A7Q9Y694 548 aa27.04■■□□□ 1.92
SSBP3-204ENST00000371320 ACP2P11117 423 aa27.04■■□□□ 1.92
SSBP3-204ENST00000371320 CPMP14384 443 aa27.04■■□□□ 1.92
SSBP3-204ENST00000371320 AKT2P31751 481 aa27.04■■□□□ 1.92
SSBP3-204ENST00000371320 SLC13A2Q13183 592 aa27.04■■□□□ 1.92
SSBP3-204ENST00000371320 RAB30Q15771 203 aa27.04■■□□□ 1.92
SSBP3-204ENST00000371320 ARHGAP11BQ3KRB8 267 aa27.04■■□□□ 1.92
SSBP3-204ENST00000371320 C3orf38Q5JPI3 329 aa27.04■■□□□ 1.92
SSBP3-204ENST00000371320 TYW3Q6IPR3 259 aaKnown RBP27.04■■□□□ 1.92
SSBP3-204ENST00000371320 TMEM92Q6UXU6 159 aa27.04■■□□□ 1.92
SSBP3-204ENST00000371320 PHC2Q8IXK0 858 aa27.04■■□□□ 1.92
SSBP3-204ENST00000371320 CADM3Q8N126 398 aa27.04■■□□□ 1.92
SSBP3-204ENST00000371320 FAM83FQ8NEG4 500 aaPredicted RBP27.04■■□□□ 1.92
SSBP3-204ENST00000371320 RNF217Q8TC41 542 aa27.04■■□□□ 1.92
SSBP3-204ENST00000371320 PRRG3Q9BZD7 231 aa27.04■■□□□ 1.92
SSBP3-204ENST00000371320 A0A075B6Q4 140 aa27.03■■□□□ 1.92
SSBP3-204ENST00000371320 ZNF860A6NHJ4 632 aa27.03■■□□□ 1.92
SSBP3-204ENST00000371320 EIF2S1P05198 315 aaKnown RBP27.03■■□□□ 1.92
SSBP3-204ENST00000371320 GTF2E2P29084 291 aaKnown RBP27.03■■□□□ 1.92
SSBP3-204ENST00000371320 RPS19P39019 145 aaKnown RBP27.03■■□□□ 1.92
SSBP3-204ENST00000371320 YPEL5P62699 121 aa27.03■■□□□ 1.92
SSBP3-204ENST00000371320 LARS2Q15031 903 aaKnown RBP27.03■■□□□ 1.92
SSBP3-204ENST00000371320 DUSP5Q16690 384 aa27.03■■□□□ 1.92
SSBP3-204ENST00000371320 CLEC12AQ5QGZ9 265 aa27.03■■□□□ 1.92
SSBP3-204ENST00000371320 RERGQ96A58 199 aaPredicted RBP27.03■■□□□ 1.92
SSBP3-204ENST00000371320 RNFT2Q96EX2 444 aa27.03■■□□□ 1.92
SSBP3-204ENST00000371320 SLC41A3Q96GZ6 507 aa27.03■■□□□ 1.92
SSBP3-204ENST00000371320 ZFYVE21Q9BQ24 234 aa27.03■■□□□ 1.92
SSBP3-204ENST00000371320 TMEM74BQ9NUR3 256 aa27.03■■□□□ 1.92
SSBP3-204ENST00000371320 MRPS18AQ9NVS2 196 aaKnown RBP27.03■■□□□ 1.92
SSBP3-204ENST00000371320 CHCHD3Q9NX63 227 aaKnown RBP27.03■■□□□ 1.92
SSBP3-204ENST00000371320 SSR3Q9UNL2 185 aa27.03■■□□□ 1.92
SSBP3-204ENST00000371320 CARD8Q9Y2G2 431 aa27.03■■□□□ 1.92
SSBP3-204ENST00000371320 IRGMA1A4Y4 181 aa27.02■■□□□ 1.92
SSBP3-204ENST00000371320 ZSCAN9O15535 394 aaPredicted RBP27.02■■□□□ 1.92
SSBP3-204ENST00000371320 ALOX12P18054 663 aa27.02■■□□□ 1.92
SSBP3-204ENST00000371320 ETV6P41212 452 aa27.02■■□□□ 1.92
SSBP3-204ENST00000371320 RAB40BQ12829 278 aa27.02■■□□□ 1.92
SSBP3-204ENST00000371320 ILF3Q12906 894 aaKnown RBP eCLIP27.02■■□□□ 1.922e-9■□□□□ 9
SSBP3-204ENST00000371320 GDF7Q7Z4P5 450 aa27.02■■□□□ 1.92
SSBP3-204ENST00000371320 POC5Q8NA72 575 aa27.02■■□□□ 1.92
SSBP3-204ENST00000371320 PRDM9Q9NQV7 894 aa27.02■■□□□ 1.92
SSBP3-204ENST00000371320 HYKKA2RU49 373 aa27.02■■□□□ 1.92
SSBP3-204ENST00000371320 CTDSP2O14595 271 aa27.02■■□□□ 1.92
SSBP3-204ENST00000371320 OR5F1O95221 314 aa27.02■■□□□ 1.92
SSBP3-204ENST00000371320 STAT5AP42229 794 aa27.02■■□□□ 1.92
SSBP3-204ENST00000371320 GAS1P54826 345 aa27.02■■□□□ 1.92
SSBP3-204ENST00000371320 ID2Q02363 134 aa27.02■■□□□ 1.92
SSBP3-204ENST00000371320 TRMT12Q53H54 448 aaKnown RBP27.02■■□□□ 1.92
SSBP3-204ENST00000371320 Q6ZSR6 202 aa27.02■■□□□ 1.92
SSBP3-204ENST00000371320 ANKK1Q8NFD2 765 aa27.02■■□□□ 1.92
SSBP3-204ENST00000371320 RPLP0P6Q8NHW5 317 aa27.02■■□□□ 1.92
SSBP3-204ENST00000371320 TRMT61AQ96FX7 289 aaKnown RBP27.02■■□□□ 1.92
SSBP3-204ENST00000371320 CEP19Q96LK0 163 aa27.02■■□□□ 1.92
SSBP3-204ENST00000371320 PCDHGB6Q9Y5F9 930 aa27.02■■□□□ 1.92
SSBP3-204ENST00000371320 APOL3O95236 402 aa27.01■■□□□ 1.91
SSBP3-204ENST00000371320 FPR3P25089 353 aa27.01■■□□□ 1.91
SSBP3-204ENST00000371320 CDC20Q12834 499 aa27.01■■□□□ 1.91
SSBP3-204ENST00000371320 ZNF836Q6ZNA1 936 aa27.01■■□□□ 1.91
SSBP3-204ENST00000371320 CCDC190Q86UF4 302 aa27.01■■□□□ 1.91
SSBP3-204ENST00000371320 TMEFF1Q8IYR6 380 aa27.01■■□□□ 1.91
SSBP3-204ENST00000371320 PATE1Q8WXA2 126 aa27.01■■□□□ 1.91
SSBP3-204ENST00000371320 OSTF1Q92882 214 aa27.01■■□□□ 1.91
SSBP3-204ENST00000371320 LYRM4Q9HD34 91 aa27.01■■□□□ 1.91
SSBP3-204ENST00000371320 FGF20Q9NP95 211 aaPredicted RBP27.01■■□□□ 1.91
SSBP3-204ENST00000371320 ZNF670-ZNF695F2Z2N8 137 aa27.01■■□□□ 1.91
SSBP3-204ENST00000371320 H0YGG7 62 aa27.01■■□□□ 1.91
SSBP3-204ENST00000371320 THY1P04216 161 aa27.01■■□□□ 1.91
SSBP3-204ENST00000371320 GNSP15586 552 aa27.01■■□□□ 1.91
SSBP3-204ENST00000371320 MTNR1AP48039 350 aa27.01■■□□□ 1.91
SSBP3-204ENST00000371320 ARF3P61204 181 aaPredicted RBP27.01■■□□□ 1.91
SSBP3-204ENST00000371320 MINDY4Q4G0A6 757 aa27.01■■□□□ 1.91
SSBP3-204ENST00000371320 NRMQ8IXM6 262 aa27.01■■□□□ 1.91
SSBP3-204ENST00000371320 FAM3CQ92520 227 aa27.01■■□□□ 1.91
SSBP3-204ENST00000371320 CPNE5Q9HCH3 593 aa27.01■■□□□ 1.91
SSBP3-204ENST00000371320 MRPS2Q9Y399 296 aaKnown RBP27.01■■□□□ 1.91
SSBP3-204ENST00000371320 TCRBV21S2A2A0A5A6 115 aa27■■□□□ 1.91
SSBP3-204ENST00000371320 PVRP15151 417 aa27■■□□□ 1.91
SSBP3-204ENST00000371320 GPR4P46093 362 aa27■■□□□ 1.91
SSBP3-204ENST00000371320 WNT4P56705 351 aa27■■□□□ 1.91
SSBP3-204ENST00000371320 ZNF628Q5EBL2 1059 aa27■■□□□ 1.91
SSBP3-204ENST00000371320 MBOAT2Q6ZWT7 520 aa27■■□□□ 1.91
SSBP3-204ENST00000371320 DOK4Q8TEW6 326 aa27■■□□□ 1.91
SSBP3-204ENST00000371320 SDF2Q99470 211 aa27■■□□□ 1.91
SSBP3-204ENST00000371320 TEX12Q9BXU0 123 aa27■■□□□ 1.91
SSBP3-204ENST00000371320 C19orf53Q9UNZ5 99 aaPredicted RBP27■■□□□ 1.91
SSBP3-204ENST00000371320 SZT2Q5T011 3432 aa27■■□□□ 1.91
SSBP3-204ENST00000371320 C2orf74A8MZ97 194 aa26.99■■□□□ 1.91
SSBP3-204ENST00000371320 CPEP16870 476 aa26.99■■□□□ 1.91
SSBP3-204ENST00000371320 SOX18P35713 384 aa26.99■■□□□ 1.91
SSBP3-204ENST00000371320 RORCP51449 518 aa26.99■■□□□ 1.91
SSBP3-204ENST00000371320 GPR68Q15743 365 aa26.99■■□□□ 1.91
SSBP3-204ENST00000371320 CCNJQ5T5M9 372 aa26.99■■□□□ 1.91
SSBP3-204ENST00000371320 TMEM255BQ8WV15 326 aa26.99■■□□□ 1.91
SSBP3-204ENST00000371320 ZFPM2Q8WW38 1151 aa26.99■■□□□ 1.91
SSBP3-204ENST00000371320 HTRA1Q92743 480 aa26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms