RNA–Protein interactions for RNA: ENST00000370656.5

RPF1-202, Transcript of ribosome production factor 1 homolog, humanhuman

TSL 2 BASIC

Gene RPF1, Length 724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-202ENST00000370656 CLDN16Q9Y5I7 305 aa13.85□□□□□ -0.19
RPF1-202ENST00000370656 NINQ8N4C6 2090 aa13.84□□□□□ -0.19
RPF1-202ENST00000370656 NCKAP5O14513 1909 aa13.84□□□□□ -0.19
RPF1-202ENST00000370656 TUBAL3A6NHL2 446 aa13.84□□□□□ -0.19
RPF1-202ENST00000370656 ANKDD1BA6NHY2 528 aa13.84□□□□□ -0.19
RPF1-202ENST00000370656 C17orf105B2RV13 164 aa13.84□□□□□ -0.19
RPF1-202ENST00000370656 EEDO75530 441 aaKnown RBP13.84□□□□□ -0.19
RPF1-202ENST00000370656 ATE1O95260 518 aa13.84□□□□□ -0.19
RPF1-202ENST00000370656 INHBBP09529 407 aa13.84□□□□□ -0.19
RPF1-202ENST00000370656 CCL3P10147 92 aa13.84□□□□□ -0.19
RPF1-202ENST00000370656 PCNAP12004 261 aa13.84□□□□□ -0.19
RPF1-202ENST00000370656 SDC1P18827 310 aa13.84□□□□□ -0.19
RPF1-202ENST00000370656 TACR1P25103 407 aa13.84□□□□□ -0.19
RPF1-202ENST00000370656 HNRNPH1P31943 449 aaKnown RBP13.84□□□□□ -0.19
RPF1-202ENST00000370656 PLA2G16P53816 162 aa13.84□□□□□ -0.19
RPF1-202ENST00000370656 TGM3Q08188 693 aa13.84□□□□□ -0.19
RPF1-202ENST00000370656 SF3B4Q15427 424 aaKnown RBP eCLIP13.84□□□□□ -0.19
RPF1-202ENST00000370656 MPEG1Q2M385 716 aa13.84□□□□□ -0.19
RPF1-202ENST00000370656 FBXL19-AS1Q494R0 122 aa13.84□□□□□ -0.19
RPF1-202ENST00000370656 ULK2Q8IYT8 1036 aa13.84□□□□□ -0.19
RPF1-202ENST00000370656 PGAM4Q8N0Y7 254 aa13.84□□□□□ -0.19
RPF1-202ENST00000370656 WFDC11Q8NEX6 87 aa13.84□□□□□ -0.19
RPF1-202ENST00000370656 OR2L5Q8NG80 312 aa13.84□□□□□ -0.19
RPF1-202ENST00000370656 PTPMT1Q8WUK0 201 aaPredicted RBP13.84□□□□□ -0.19
RPF1-202ENST00000370656 TESCQ96BS2 214 aa13.84□□□□□ -0.19
RPF1-202ENST00000370656 RCN3Q96D15 328 aa13.84□□□□□ -0.19
RPF1-202ENST00000370656 SPDL1Q96EA4 605 aa13.84□□□□□ -0.19
RPF1-202ENST00000370656 REXO4Q9GZR2 422 aaKnown RBP13.84□□□□□ -0.19
RPF1-202ENST00000370656 AICDAQ9GZX7 198 aa13.84□□□□□ -0.19
RPF1-202ENST00000370656 QPCTLQ9NXS2 382 aa13.84□□□□□ -0.19
RPF1-202ENST00000370656 SPRR3Q9UBC9 169 aa13.84□□□□□ -0.19
RPF1-202ENST00000370656 ZNF629Q9UEG4 869 aaPredicted RBP13.84□□□□□ -0.19
RPF1-202ENST00000370656 DAPP1Q9UN19 280 aa13.84□□□□□ -0.19
RPF1-202ENST00000370656 AHRRA9YTQ3 701 aa13.83□□□□□ -0.2
RPF1-202ENST00000370656 CYR61O00622 381 aa13.83□□□□□ -0.2
RPF1-202ENST00000370656 GOSR1O95249 250 aa13.83□□□□□ -0.2
RPF1-202ENST00000370656 IL2RAP01589 272 aa13.83□□□□□ -0.2
RPF1-202ENST00000370656 EPXP11678 715 aa13.83□□□□□ -0.2
RPF1-202ENST00000370656 COX7A2P14406 83 aa13.83□□□□□ -0.2
RPF1-202ENST00000370656 CLNS1AP54105 237 aaKnown RBP13.83□□□□□ -0.2
RPF1-202ENST00000370656 MTTPP55157 894 aa13.83□□□□□ -0.2
RPF1-202ENST00000370656 LIM2P55344 173 aa13.83□□□□□ -0.2
RPF1-202ENST00000370656 LSM11P83369 360 aaKnown RBP eCLIP13.83□□□□□ -0.2
RPF1-202ENST00000370656 SLC25A3Q00325 362 aa13.83□□□□□ -0.2
RPF1-202ENST00000370656 ACSM2AQ08AH3 577 aa13.83□□□□□ -0.2
RPF1-202ENST00000370656 ACSM2BQ68CK6 577 aa13.83□□□□□ -0.2
RPF1-202ENST00000370656 REP15Q6BDI9 236 aa13.83□□□□□ -0.2
RPF1-202ENST00000370656 C16orf89Q6UX73 402 aa13.83□□□□□ -0.2
RPF1-202ENST00000370656 CLEC9AQ6UXN8 241 aa13.83□□□□□ -0.2
RPF1-202ENST00000370656 MSANTD1Q6ZTZ1 278 aa13.83□□□□□ -0.2
RPF1-202ENST00000370656 RETREG3Q86VR2 466 aa13.83□□□□□ -0.2
RPF1-202ENST00000370656 ARHGAP24Q8N264 748 aa13.83□□□□□ -0.2
RPF1-202ENST00000370656 PCYOX1LQ8NBM8 494 aa13.83□□□□□ -0.2
RPF1-202ENST00000370656 RELL2Q8NC24 303 aaPredicted RBP13.83□□□□□ -0.2
RPF1-202ENST00000370656 SLC22A8Q8TCC7 542 aa13.83□□□□□ -0.2
RPF1-202ENST00000370656 SLC2A12Q8TD20 617 aa13.83□□□□□ -0.2
RPF1-202ENST00000370656 QRFPRQ96P65 431 aa13.83□□□□□ -0.2
RPF1-202ENST00000370656 ZNF717Q9BY31 904 aaPredicted RBP13.83□□□□□ -0.2
RPF1-202ENST00000370656 ZNF703Q9H7S9 590 aaPredicted RBP13.83□□□□□ -0.2
RPF1-202ENST00000370656 ZFP64Q9NPA5 681 aa13.83□□□□□ -0.2
RPF1-202ENST00000370656 ACKR4Q9NPB9 350 aa13.83□□□□□ -0.2
RPF1-202ENST00000370656 ADAM29Q9UKF5 820 aa13.83□□□□□ -0.2
RPF1-202ENST00000370656 PRPF19Q9UMS4 504 aaKnown RBP13.83□□□□□ -0.2
RPF1-202ENST00000370656 SPACA6W5XKT8 324 aa13.83□□□□□ -0.2
RPF1-202ENST00000370656 AIM2O14862 343 aa13.82□□□□□ -0.2
RPF1-202ENST00000370656 DYRK3O43781 588 aa13.82□□□□□ -0.2
RPF1-202ENST00000370656 IL6P05231 212 aa13.82□□□□□ -0.2
RPF1-202ENST00000370656 PRPS1L1P21108 318 aa13.82□□□□□ -0.2
RPF1-202ENST00000370656 ENDOUP21128 410 aaKnown RBP13.82□□□□□ -0.2
RPF1-202ENST00000370656 HOXC12P31275 282 aa13.82□□□□□ -0.2
RPF1-202ENST00000370656 TIA1P31483 386 aaKnown RBP eCLIP13.82□□□□□ -0.2
RPF1-202ENST00000370656 PGM1P36871 562 aa13.82□□□□□ -0.2
RPF1-202ENST00000370656 PIGAP37287 484 aa13.82□□□□□ -0.2
RPF1-202ENST00000370656 ASMTP46597 345 aa13.82□□□□□ -0.2
RPF1-202ENST00000370656 DDX39BQ13838 428 aaKnown RBP13.82□□□□□ -0.2
RPF1-202ENST00000370656 PTGR1Q14914 329 aa13.82□□□□□ -0.2
RPF1-202ENST00000370656 DPY19L1Q2PZI1 675 aa13.82□□□□□ -0.2
RPF1-202ENST00000370656 VPS26BQ4G0F5 336 aa13.82□□□□□ -0.2
RPF1-202ENST00000370656 TMEM35AQ53FP2 167 aa13.82□□□□□ -0.2
RPF1-202ENST00000370656 PIGGQ5H8A4 983 aa13.82□□□□□ -0.2
RPF1-202ENST00000370656 KHDRBS2Q5VWX1 349 aaKnown RBP13.82□□□□□ -0.2
RPF1-202ENST00000370656 LACC1Q8IV20 430 aa13.82□□□□□ -0.2
RPF1-202ENST00000370656 DND1Q8IYX4 353 aaKnown RBP13.82□□□□□ -0.2
RPF1-202ENST00000370656 SLC15A4Q8N697 577 aa13.82□□□□□ -0.2
RPF1-202ENST00000370656 C1orf52Q8N6N3 182 aaKnown RBP13.82□□□□□ -0.2
RPF1-202ENST00000370656 NEIL3Q8TAT5 605 aa13.82□□□□□ -0.2
RPF1-202ENST00000370656 HSPBAP1Q96EW2 488 aa13.82□□□□□ -0.2
RPF1-202ENST00000370656 CSF3RQ99062 836 aa13.82□□□□□ -0.2
RPF1-202ENST00000370656 SMR3AQ99954 134 aa13.82□□□□□ -0.2
RPF1-202ENST00000370656 HOPXQ9BPY8 73 aaPredicted RBP13.82□□□□□ -0.2
RPF1-202ENST00000370656 DPY30Q9C005 99 aa13.82□□□□□ -0.2
RPF1-202ENST00000370656 ROGDIQ9GZN7 287 aa13.82□□□□□ -0.2
RPF1-202ENST00000370656 RYDENQ9NUL5 291 aaKnown RBP13.82□□□□□ -0.2
RPF1-202ENST00000370656 AHSPQ9NZD4 102 aa13.82□□□□□ -0.2
RPF1-202ENST00000370656 CNIH4Q9P003 139 aa13.82□□□□□ -0.2
RPF1-202ENST00000370656 MCM8Q9UJA3 840 aa13.82□□□□□ -0.2
RPF1-202ENST00000370656 MYOCOSA0A1B0GUC4 107 aa13.81□□□□□ -0.2
RPF1-202ENST00000370656 MRASO14807 208 aa13.81□□□□□ -0.2
RPF1-202ENST00000370656 CFLARO15519 480 aa13.81□□□□□ -0.2
RPF1-202ENST00000370656 EPPINO95925 133 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms