RNA–Protein interactions for RNA: ENST00000370532.3

CDR1-201, Transcript of cerebellar degeneration related protein 1, humanhuman

APPRIS P1 BASIC

Gene CDR1, Length 2,467 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-201ENST00000370532 NAA40Q86UY6 237 aa4.21□□□□□ -1.74
CDR1-201ENST00000370532 PUSL1Q8N0Z8 303 aaKnown RBP4.21□□□□□ -1.74
CDR1-201ENST00000370532 PGBD5Q8N414 524 aa4.21□□□□□ -1.74
CDR1-201ENST00000370532 HDDC3Q8N4P3 179 aa4.21□□□□□ -1.74
CDR1-201ENST00000370532 EIF4E3Q8N5X7 224 aaKnown RBP4.21□□□□□ -1.74
CDR1-201ENST00000370532 CPEB3Q8NE35 698 aaKnown RBP4.21□□□□□ -1.74
CDR1-201ENST00000370532 RNASE11Q8TAA1 199 aaKnown RBP4.21□□□□□ -1.74
CDR1-201ENST00000370532 BAHD1Q8TBE0 780 aaPredicted RBP4.21□□□□□ -1.74
CDR1-201ENST00000370532 BTN2A2Q8WVV5 523 aa4.21□□□□□ -1.74
CDR1-201ENST00000370532 UCN3Q969E3 161 aa4.21□□□□□ -1.74
CDR1-201ENST00000370532 COL26A1Q96A83 441 aa4.21□□□□□ -1.74
CDR1-201ENST00000370532 TMEM125Q96AQ2 219 aa4.21□□□□□ -1.74
CDR1-201ENST00000370532 ZC3HAV1LQ96H79 300 aaKnown RBP4.21□□□□□ -1.74
CDR1-201ENST00000370532 PPP3R2Q96LZ3 170 aa4.21□□□□□ -1.74
CDR1-201ENST00000370532 TMEM74Q96NL1 305 aa4.21□□□□□ -1.74
CDR1-201ENST00000370532 SLC22A12Q96S37 553 aa4.21□□□□□ -1.74
CDR1-201ENST00000370532 C7orf50Q9BRJ6 194 aaKnown RBP4.21□□□□□ -1.74
CDR1-201ENST00000370532 C2orf88Q9BSF0 95 aa4.21□□□□□ -1.74
CDR1-201ENST00000370532 GGACTQ9BVM4 153 aa4.21□□□□□ -1.74
CDR1-201ENST00000370532 POLR1EQ9GZS1 481 aaKnown RBP4.21□□□□□ -1.74
CDR1-201ENST00000370532 MED28Q9H204 178 aa4.21□□□□□ -1.74
CDR1-201ENST00000370532 SPACA1Q9HBV2 294 aa4.21□□□□□ -1.74
CDR1-201ENST00000370532 ABCB9Q9NP78 766 aa4.21□□□□□ -1.74
CDR1-201ENST00000370532 EMC7Q9NPA0 242 aa4.21□□□□□ -1.74
CDR1-201ENST00000370532 B3GAT2Q9NPZ5 323 aa4.21□□□□□ -1.74
CDR1-201ENST00000370532 OXSMQ9NWU1 459 aa4.21□□□□□ -1.74
CDR1-201ENST00000370532 GRHPRQ9UBQ7 328 aa4.21□□□□□ -1.74
CDR1-201ENST00000370532 NDRG4Q9ULP0 352 aaKnown RBP4.21□□□□□ -1.74
CDR1-201ENST00000370532 FZD4Q9ULV1 537 aa4.21□□□□□ -1.74
CDR1-201ENST00000370532 RUVBL1Q9Y265 456 aaKnown RBP4.21□□□□□ -1.74
CDR1-201ENST00000370532 CA5BQ9Y2D0 317 aa4.21□□□□□ -1.74
CDR1-201ENST00000370532 PCDHA9Q9Y5H5 950 aa4.21□□□□□ -1.74
CDR1-201ENST00000370532 SNX10Q9Y5X0 201 aa4.21□□□□□ -1.74
CDR1-201ENST00000370532 GPR45Q9Y5Y3 372 aa4.21□□□□□ -1.74
CDR1-201ENST00000370532 HS3ST4Q9Y661 456 aa4.21□□□□□ -1.74
CDR1-201ENST00000370532 WNT6Q9Y6F9 365 aa4.21□□□□□ -1.74
CDR1-201ENST00000370532 REV3LO60673 3130 aa4.21□□□□□ -1.74
CDR1-201ENST00000370532 C5orf42Q9H799 3197 aa4.21□□□□□ -1.74
CDR1-201ENST00000370532 IGHV1OR15-9A0A0B4J2B8 117 aa4.2□□□□□ -1.74
CDR1-201ENST00000370532 GLYATL1P3A0A0U1RQE8 302 aa4.2□□□□□ -1.74
CDR1-201ENST00000370532 DCDC2BA2VCK2 349 aa4.2□□□□□ -1.74
CDR1-201ENST00000370532 SLC35F4A4IF30 521 aa4.2□□□□□ -1.74
CDR1-201ENST00000370532 CD3EAPO15446 510 aaKnown RBP4.2□□□□□ -1.74
CDR1-201ENST00000370532 LYRM1O43325 122 aa4.2□□□□□ -1.74
CDR1-201ENST00000370532 OIP5O43482 229 aa4.2□□□□□ -1.74
CDR1-201ENST00000370532 ORC5O43913 435 aa4.2□□□□□ -1.74
CDR1-201ENST00000370532 VPS26AO75436 327 aa4.2□□□□□ -1.74
CDR1-201ENST00000370532 STC2O76061 302 aa4.2□□□□□ -1.74
CDR1-201ENST00000370532 PRAMEF1O95521 474 aa4.2□□□□□ -1.74
CDR1-201ENST00000370532 HIST1H2AGP0C0S8 130 aaPredicted RBP4.2□□□□□ -1.74
CDR1-201ENST00000370532 MLNP12872 115 aa4.2□□□□□ -1.74
CDR1-201ENST00000370532 HOXB2P14652 356 aa4.2□□□□□ -1.74
CDR1-201ENST00000370532 RPS2P15880 293 aaKnown RBP4.2□□□□□ -1.74
CDR1-201ENST00000370532 HIST1H2ADP20671 130 aa4.2□□□□□ -1.74
CDR1-201ENST00000370532 DNASE1P24855 282 aa4.2□□□□□ -1.74
CDR1-201ENST00000370532 ITGA3P26006 1051 aa4.2□□□□□ -1.74
CDR1-201ENST00000370532 APEX1P27695 318 aaKnown RBP4.2□□□□□ -1.74
CDR1-201ENST00000370532 EPHA2P29317 976 aa4.2□□□□□ -1.74
CDR1-201ENST00000370532 CCR7P32248 378 aa4.2□□□□□ -1.74
CDR1-201ENST00000370532 MPIP34949 423 aa4.2□□□□□ -1.74
CDR1-201ENST00000370532 MMP12P39900 470 aa4.2□□□□□ -1.74
CDR1-201ENST00000370532 SLC11A2P49281 568 aa4.2□□□□□ -1.74
CDR1-201ENST00000370532 DGKGP49619 791 aa4.2□□□□□ -1.74
CDR1-201ENST00000370532 OR4D2P58180 307 aa4.2□□□□□ -1.74
CDR1-201ENST00000370532 NUTF2P61970 127 aaKnown RBP4.2□□□□□ -1.74
CDR1-201ENST00000370532 BTG1P62324 171 aa4.2□□□□□ -1.74
CDR1-201ENST00000370532 ZXDBP98169 803 aa4.2□□□□□ -1.74
CDR1-201ENST00000370532 NRG1Q02297 640 aaPredicted RBP4.2□□□□□ -1.74
CDR1-201ENST00000370532 FABP9Q0Z7S8 132 aa4.2□□□□□ -1.74
CDR1-201ENST00000370532 ILF3Q12906 894 aaKnown RBP eCLIP4.2□□□□□ -1.74
CDR1-201ENST00000370532 PLA2G7Q13093 441 aa4.2□□□□□ -1.74
CDR1-201ENST00000370532 OPCMLQ14982 345 aa4.2□□□□□ -1.74
CDR1-201ENST00000370532 LAPTM4AQ15012 233 aa4.2□□□□□ -1.74
CDR1-201ENST00000370532 PAFAH1B3Q15102 231 aaKnown RBP4.2□□□□□ -1.74
CDR1-201ENST00000370532 TRAM1Q15629 374 aa4.2□□□□□ -1.74
CDR1-201ENST00000370532 GUCA2BQ16661 112 aa4.2□□□□□ -1.74
CDR1-201ENST00000370532 FNDC3BQ53EP0 1204 aaKnown RBP4.2□□□□□ -1.74
CDR1-201ENST00000370532 MS4A13Q5J8X5 152 aa4.2□□□□□ -1.74
CDR1-201ENST00000370532 BCL2L15Q5TBC7 163 aa4.2□□□□□ -1.74
CDR1-201ENST00000370532 LCN1P1Q5VSP4 162 aa4.2□□□□□ -1.74
CDR1-201ENST00000370532 MLIPQ5VWP3 458 aa4.2□□□□□ -1.74
CDR1-201ENST00000370532 NCBP2-AS2Q69YL0 99 aa4.2□□□□□ -1.74
CDR1-201ENST00000370532 HIST2H2AA3Q6FI13 130 aa4.2□□□□□ -1.74
CDR1-201ENST00000370532 ETFRF1Q6IPR1 90 aa4.2□□□□□ -1.74
CDR1-201ENST00000370532 LIN54Q6MZP7 749 aa4.2□□□□□ -1.74
CDR1-201ENST00000370532 KIAA1211LQ6NV74 962 aa4.2□□□□□ -1.74
CDR1-201ENST00000370532 CFAP161Q6P656 301 aa4.2□□□□□ -1.74
CDR1-201ENST00000370532 TMEM107Q6UX40 140 aa4.2□□□□□ -1.74
CDR1-201ENST00000370532 NPSR1Q6W5P4 371 aa4.2□□□□□ -1.74
CDR1-201ENST00000370532 C3P1Q6ZMU1 363 aa4.2□□□□□ -1.74
CDR1-201ENST00000370532 RPS27LQ71UM5 84 aaKnown RBP4.2□□□□□ -1.74
CDR1-201ENST00000370532 GVINP1Q7Z2Y8 2422 aa4.2□□□□□ -1.74
CDR1-201ENST00000370532 CUZD1Q86UP6 607 aa4.2□□□□□ -1.74
CDR1-201ENST00000370532 IQCHQ86VS3 1027 aa4.2□□□□□ -1.74
CDR1-201ENST00000370532 CCDC71Q8IV32 467 aaPredicted RBP4.2□□□□□ -1.74
CDR1-201ENST00000370532 FTMTQ8N4E7 242 aa4.2□□□□□ -1.74
CDR1-201ENST00000370532 CDYL2Q8N8U2 506 aa4.2□□□□□ -1.74
CDR1-201ENST00000370532 ACVR1CQ8NER5 493 aa4.2□□□□□ -1.74
CDR1-201ENST00000370532 BPIFCQ8NFQ6 507 aa4.2□□□□□ -1.74
CDR1-201ENST00000370532 DNAJB14Q8TBM8 379 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms