RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 ANKRD28O15084 1053 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 SLC19A1P41440 591 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 KCNJ5P48544 419 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 ZNF45Q02386 682 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 NSDHLQ15738 373 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 DEFB133Q30KQ1 61 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 COX20Q5RI15 118 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 LYSMD4Q5XG99 296 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 SAXO2Q658L1 398 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 CDH24Q86UP0 819 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 MARCH9Q86YJ5 346 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 TMEM151BQ8IW70 566 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 OR2A1Q8NGT9 310 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 CDS1Q92903 461 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 NAT6Q93015 286 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 TBC1D20Q96BZ9 403 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 SLC25A36Q96CQ1 311 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 HRASLS5Q96KN8 279 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 GTPBP2Q9BX10 602 aaKnown RBP4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 ANKRD19PQ9H560 264 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 UBE2ZQ9H832 354 aaPredicted RBP4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 POLE3Q9NRF9 147 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 PAK1IP1Q9NWT1 392 aaPredicted RBP4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 GPR83Q9NYM4 423 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 SLC35A3Q9Y2D2 325 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 PLEKHM1Q9Y4G2 1056 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 ATG4BQ9Y4P1 393 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 A0A1B0GW55 424 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 OR5K3A6NET4 321 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 BCAT2O15382 392 aaPredicted RBP4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 HCRTR2O43614 444 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 GMFGO60234 142 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 TBX19O60806 448 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 SDC3O75056 442 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 SNX4O95219 450 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 PAPLNO95428 1278 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 SYPP08247 313 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 DUX4L2P0CJ85 424 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 DUX4L3P0CJ86 424 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 DUX4L4P0CJ87 422 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 DUX4L5P0CJ88 424 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 DUX4L6P0CJ89 424 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 DUX4L7P0CJ90 424 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 PRKAR1BP31321 381 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 BSGP35613 385 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 SLC6A8P48029 635 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 DAPP51397 102 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 METAP1P53582 386 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 RAB25P57735 213 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 PPP2CBP62714 309 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 PPP2CAP67775 309 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 MADCAM1Q13477 382 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 HTR4Q13639 388 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 CAMK1Q14012 370 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 PLAG1Q6DJT9 500 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 SYCE2Q6PIF2 218 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 PLEKHG7Q6ZR37 379 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 RIMKLAQ8IXN7 391 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 ACBD7Q8N6N7 88 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 TP53I13Q8NBR0 393 aaPredicted RBP4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 SLC37A2Q8TED4 501 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 PMEPA1Q969W9 287 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 ELP4Q96EB1 424 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 FAM46AQ96IP4 442 aaKnown RBP4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 BMFQ96LC9 184 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 GABRG3Q99928 467 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 KCNS3Q9BQ31 491 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 GABARAPL1Q9H0R8 117 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 PIGUQ9H490 435 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 PTGES2Q9H7Z7 377 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 KLRF1Q9NZS2 232 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 NDUFAF4Q9P032 175 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 GRHPRQ9UBQ7 328 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 DUX4Q9UBX2 424 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 TESQ9UGI8 421 aaKnown RBP4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 ZFR2Q9UPR6 939 aaKnown RBP4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 FAM240BA0A1B0GVZ2 78 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 TLCD2A6NGC4 264 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 BLOC1S5-TXNDC5H3BN57 136 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 TP53I11O14683 189 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 PRODHO43272 600 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 LDB3O75112 727 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 ITGA10O75578 1167 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 ETHE1O95571 254 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 PNMTP11086 282 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 FAUP35544 74 aaKnown RBP4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 GPR4P46093 362 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 XCR1P46094 333 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 OMPP47874 163 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 AFF3P51826 1226 aaKnown RBP4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 C21orf58P58505 322 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 DCAF7P61962 342 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 PPP2R2BQ00005 443 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 CRYZQ08257 329 aaKnown RBP4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 TBCEQ15813 527 aaPredicted RBP4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 SLC35F1Q5T1Q4 408 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 C18orf63Q68DL7 685 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 KDM4DQ6B0I6 523 aa4.99□□□□□ -1.61
SMNDC1-202ENST00000369603 PODNL1Q6PEZ8 512 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms