RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 MRASO14807 208 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 MYL12BO14950 172 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 HCN1O60741 890 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 DHFRP00374 187 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 NPPAP01160 153 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 ACAA1P09110 424 aaPredicted RBP6.43□□□□□ -1.38
CSDE1-204ENST00000369530 SMIM10L1P0DMW3 83 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 MYL12AP19105 171 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 KIR2DL3P43628 341 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 DNAJB13P59910 316 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 SCN1BQ07699 218 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 SOWAHCQ53LP3 525 aaPredicted RBP6.43□□□□□ -1.38
CSDE1-204ENST00000369530 ARL13AQ5H913 290 aaPredicted RBP6.43□□□□□ -1.38
CSDE1-204ENST00000369530 HECTD2Q5U5R9 776 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 PTRHD1Q6GMV3 140 aaKnown RBP6.43□□□□□ -1.38
CSDE1-204ENST00000369530 KIAA0930Q6ICG6 404 aaPredicted RBP6.43□□□□□ -1.38
CSDE1-204ENST00000369530 LRRC8EQ6NSJ5 796 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 CYP2R1Q6VVX0 501 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 GK5Q6ZS86 529 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 MAMDC2Q7Z304 686 aaPredicted RBP6.43□□□□□ -1.38
CSDE1-204ENST00000369530 C16orf62Q7Z3J2 963 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 SLC9B2Q86UD5 537 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 CEP97Q8IW35 865 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 STX19Q8N4C7 294 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.43□□□□□ -1.38
CSDE1-204ENST00000369530 NLGN4YQ8NFZ3 816 aaPredicted RBP6.43□□□□□ -1.38
CSDE1-204ENST00000369530 SCAMP4Q969E2 229 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 RBM18Q96H35 190 aaKnown RBP6.43□□□□□ -1.38
CSDE1-204ENST00000369530 SMIM10Q96HG1 83 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 NRTNQ99748 197 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 TBCDQ9BTW9 1192 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 SEMA6CQ9H3T2 930 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 SOX17Q9H6I2 414 aaPredicted RBP6.43□□□□□ -1.38
CSDE1-204ENST00000369530 ZBTB20Q9HC78 741 aaPredicted RBP6.43□□□□□ -1.38
CSDE1-204ENST00000369530 EXD2Q9NVH0 621 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 SDHAF2Q9NX18 166 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 TAAR2Q9P1P5 351 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 MAP10Q9P2G4 905 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 GALPQ9UBC7 116 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 LAMP5Q9UJQ1 280 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 NCKAP1Q9Y2A7 1128 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 KNL1Q8NG31 2342 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 IQCMA0A1B0GVH7 501 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 PIPSLA2A3N6 862 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 PRMT5O14744 637 aaPredicted RBP6.43□□□□□ -1.38
CSDE1-204ENST00000369530 SEC22BO75396 215 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 ATP6AP2O75787 350 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 AP2A2O94973 939 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 AGXTP21549 392 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 DHPSP49366 369 aaPredicted RBP6.43□□□□□ -1.38
CSDE1-204ENST00000369530 SLC7A2P52569 658 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 ERVK-8P63133 956 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 TLE3Q04726 772 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 SRSF1Q07955 248 aaKnown RBP eCLIP6.43□□□□□ -1.38
CSDE1-204ENST00000369530 ZIC1Q15915 447 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 ARMC12Q5T9G4 340 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 SEZ6L2Q6UXD5 910 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 COX15Q7KZN9 410 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 ARL14Q8N4G2 192 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 OR4K1Q8NGD4 311 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 TUBGCP3Q96CW5 907 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 WDR34Q96EX3 536 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 KLHDC7BQ96G42 594 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 HS6ST2Q96MM7 605 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 GPR22Q99680 433 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 RBM4BQ9BQ04 359 aaKnown RBP6.43□□□□□ -1.38
CSDE1-204ENST00000369530 RBM4Q9BWF3 364 aaKnown RBP6.43□□□□□ -1.38
CSDE1-204ENST00000369530 PAPOLGQ9BWT3 736 aaKnown RBP6.43□□□□□ -1.38
CSDE1-204ENST00000369530 QRSL1Q9H0R6 528 aaKnown RBP6.43□□□□□ -1.38
CSDE1-204ENST00000369530 NCOR1P1Q9H4R4 102 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 CMTM6Q9NX76 183 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 MALT1Q9UDY8 824 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 FKBPLQ9UIM3 349 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 KLHL20Q9Y2M5 609 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 PCDHGA9Q9Y5G4 932 aaKnown RBP6.43□□□□□ -1.38
CSDE1-204ENST00000369530 NPTNQ9Y639 398 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 ALG5Q9Y673 324 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 SLC22A7Q9Y694 548 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 C9orf170A2RU37 121 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 C7orf66A4D0T2 115 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 MPC2O95563 127 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 PTBP3O95758 552 aaKnown RBP6.43□□□□□ -1.38
CSDE1-204ENST00000369530 LALBAP00709 142 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 SBK3P0C264 359 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 FOLR2P14207 255 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 MC4RP32245 332 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 NNMTP40261 264 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 VEGFCP49767 419 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 TSPAN5P62079 268 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 POLR2LP62875 67 aaKnown RBP6.43□□□□□ -1.38
CSDE1-204ENST00000369530 GABREP78334 506 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 TIGD6Q17RP2 521 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 FAM151BQ6UXP7 276 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 CACUL1Q86Y37 369 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 TBC1D19Q8N5T2 526 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 SLC37A3Q8NCC5 494 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 SETD9Q8NE22 299 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 ZNF555Q8NEP9 628 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 OR6C4Q8NGE1 309 aa6.43□□□□□ -1.38
CSDE1-204ENST00000369530 TMEM125Q96AQ2 219 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms