RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 NPDC1Q9NQX5 325 aaPredicted RBP15.21■□□□□ 0.03
CHD1L-203ENST00000369259 D6RAR5 112 aa15.21■□□□□ 0.03
CHD1L-203ENST00000369259 ADAM11O75078 769 aa15.21■□□□□ 0.03
CHD1L-203ENST00000369259 URODP06132 367 aa15.21■□□□□ 0.03
CHD1L-203ENST00000369259 GSTM3P21266 225 aa15.21■□□□□ 0.03
CHD1L-203ENST00000369259 RNF144AP50876 292 aaPredicted RBP15.21■□□□□ 0.03
CHD1L-203ENST00000369259 OR10A3P58181 314 aa15.21■□□□□ 0.03
CHD1L-203ENST00000369259 DYRK1AQ13627 763 aa15.21■□□□□ 0.03
CHD1L-203ENST00000369259 PRSS53Q2L4Q9 553 aa15.21■□□□□ 0.03
CHD1L-203ENST00000369259 TNFAIP8L2Q6P589 184 aaPredicted RBP15.21■□□□□ 0.03
CHD1L-203ENST00000369259 C16orf59Q7L2K0 433 aa15.21■□□□□ 0.03
CHD1L-203ENST00000369259 MCATQ8IVS2 390 aaKnown RBP15.21■□□□□ 0.03
CHD1L-203ENST00000369259 PDZD9Q8IXQ8 264 aa15.21■□□□□ 0.03
CHD1L-203ENST00000369259 CBARPQ8N350 705 aaPredicted RBP15.21■□□□□ 0.03
CHD1L-203ENST00000369259 RFKQ969G6 155 aa15.21■□□□□ 0.03
CHD1L-203ENST00000369259 ZFP3Q96NJ6 502 aa15.21■□□□□ 0.03
CHD1L-203ENST00000369259 TMPRSS13Q9BYE2 586 aa15.21■□□□□ 0.03
CHD1L-203ENST00000369259 SMG9Q9H0W8 520 aaKnown RBP15.21■□□□□ 0.03
CHD1L-203ENST00000369259 WDR26Q9H7D7 661 aa15.21■□□□□ 0.03
CHD1L-203ENST00000369259 MARK1Q9P0L2 795 aa15.21■□□□□ 0.03
CHD1L-203ENST00000369259 MGAT4CQ9UBM8 478 aa15.21■□□□□ 0.03
CHD1L-203ENST00000369259 NINQ8N4C6 2090 aa15.2■□□□□ 0.02
CHD1L-203ENST00000369259 SLC9B1P1A6NJY1 282 aa15.2■□□□□ 0.02
CHD1L-203ENST00000369259 FAM74A7A6NL05 159 aa15.2■□□□□ 0.02
CHD1L-203ENST00000369259 F8W036 122 aa15.2■□□□□ 0.02
CHD1L-203ENST00000369259 RP2O75695 350 aa15.2■□□□□ 0.02
CHD1L-203ENST00000369259 GIPP09681 153 aaPredicted RBP15.2■□□□□ 0.02
CHD1L-203ENST00000369259 RPS26P62854 115 aaKnown RBP15.2■□□□□ 0.02
CHD1L-203ENST00000369259 SEMG2Q02383 582 aa15.2■□□□□ 0.02
CHD1L-203ENST00000369259 KLF9Q13886 244 aaPredicted RBP15.2■□□□□ 0.02
CHD1L-203ENST00000369259 FAM74A3Q4VXF1 159 aa15.2■□□□□ 0.02
CHD1L-203ENST00000369259 IGSF11Q5DX21 431 aa15.2■□□□□ 0.02
CHD1L-203ENST00000369259 PDSS1Q5T2R2 415 aa15.2■□□□□ 0.02
CHD1L-203ENST00000369259 METTL11BQ5VVY1 283 aa15.2■□□□□ 0.02
CHD1L-203ENST00000369259 COMMD6Q7Z4G1 85 aa15.2■□□□□ 0.02
CHD1L-203ENST00000369259 OR1S1Q8NH92 325 aa15.2■□□□□ 0.02
CHD1L-203ENST00000369259 C16orf78Q8WTQ4 265 aa15.2■□□□□ 0.02
CHD1L-203ENST00000369259 EXOGQ9Y2C4 368 aaKnown RBP15.2■□□□□ 0.02
CHD1L-203ENST00000369259 CA5BQ9Y2D0 317 aa15.2■□□□□ 0.02
CHD1L-203ENST00000369259 KIAA1671Q9BY89 1806 aa15.2■□□□□ 0.02
CHD1L-203ENST00000369259 LRRN3E7EW58 273 aa15.2■□□□□ 0.02
CHD1L-203ENST00000369259 SYN3O14994 580 aa15.2■□□□□ 0.02
CHD1L-203ENST00000369259 UBXN7O94888 489 aa15.2■□□□□ 0.02
CHD1L-203ENST00000369259 IGHA1P01876 353 aa15.2■□□□□ 0.02
CHD1L-203ENST00000369259 MAPK9P45984 424 aa15.2■□□□□ 0.02
CHD1L-203ENST00000369259 RECQLP46063 649 aaPredicted RBP15.2■□□□□ 0.02
CHD1L-203ENST00000369259 NAE1Q13564 534 aa15.2■□□□□ 0.02
CHD1L-203ENST00000369259 FAM71E1Q6IPT2 247 aa15.2■□□□□ 0.02
CHD1L-203ENST00000369259 TPGS1Q6ZTW0 290 aa15.2■□□□□ 0.02
CHD1L-203ENST00000369259 IFNL1Q8IU54 200 aa15.2■□□□□ 0.02
CHD1L-203ENST00000369259 NAXDQ8IW45 347 aa15.2■□□□□ 0.02
CHD1L-203ENST00000369259 SPICQ8N5J4 248 aa15.2■□□□□ 0.02
CHD1L-203ENST00000369259 FAM71CQ8NEG0 241 aa15.2■□□□□ 0.02
CHD1L-203ENST00000369259 FBXO22Q8NEZ5 403 aa15.2■□□□□ 0.02
CHD1L-203ENST00000369259 OR6K2Q8NGY2 324 aa15.2■□□□□ 0.02
CHD1L-203ENST00000369259 OR51Q1Q8NH59 317 aa15.2■□□□□ 0.02
CHD1L-203ENST00000369259 MED8Q96G25 268 aa15.2■□□□□ 0.02
CHD1L-203ENST00000369259 TINF2Q9BSI4 451 aa15.2■□□□□ 0.02
CHD1L-203ENST00000369259 LRRN3Q9H3W5 708 aa15.2■□□□□ 0.02
CHD1L-203ENST00000369259 CXorf36Q9H7Y0 433 aa15.2■□□□□ 0.02
CHD1L-203ENST00000369259 EVA1AQ9H8M9 152 aa15.2■□□□□ 0.02
CHD1L-203ENST00000369259 HMX1Q9NP08 348 aaPredicted RBP15.2■□□□□ 0.02
CHD1L-203ENST00000369259 PURGQ9UJV8 347 aaKnown RBP15.2■□□□□ 0.02
CHD1L-203ENST00000369259 FLVCR2Q9UPI3 526 aa15.2■□□□□ 0.02
CHD1L-203ENST00000369259 SCN8AQ9UQD0 1980 aa15.2■□□□□ 0.02
CHD1L-203ENST00000369259 OAZ2O95190 189 aa15.19■□□□□ 0.02
CHD1L-203ENST00000369259 S100A11P31949 105 aa15.19■□□□□ 0.02
CHD1L-203ENST00000369259 VIPR1P32241 457 aa15.19■□□□□ 0.02
CHD1L-203ENST00000369259 BDH1Q02338 343 aa15.19■□□□□ 0.02
CHD1L-203ENST00000369259 CRHR2Q13324 411 aa15.19■□□□□ 0.02
CHD1L-203ENST00000369259 FZD5Q13467 585 aa15.19■□□□□ 0.02
CHD1L-203ENST00000369259 HTR4Q13639 388 aa15.19■□□□□ 0.02
CHD1L-203ENST00000369259 MPP7Q5T2T1 576 aa15.19■□□□□ 0.02
CHD1L-203ENST00000369259 KIAA1161Q6NSJ0 714 aa15.19■□□□□ 0.02
CHD1L-203ENST00000369259 CHST9Q7L1S5 443 aa15.19■□□□□ 0.02
CHD1L-203ENST00000369259 METTL3Q86U44 580 aaKnown RBP15.19■□□□□ 0.02
CHD1L-203ENST00000369259 MORN4Q8NDC4 146 aa15.19■□□□□ 0.02
CHD1L-203ENST00000369259 LRRC46Q96FV0 321 aa15.19■□□□□ 0.02
CHD1L-203ENST00000369259 DMRTA2Q96SC8 542 aa15.19■□□□□ 0.02
CHD1L-203ENST00000369259 PIM2Q9P1W9 311 aa15.19■□□□□ 0.02
CHD1L-203ENST00000369259 SEC14L3Q9UDX4 400 aa15.19■□□□□ 0.02
CHD1L-203ENST00000369259 MBD1Q9UIS9 605 aaPredicted RBP15.19■□□□□ 0.02
CHD1L-203ENST00000369259 TRPV2Q9Y5S1 764 aa15.19■□□□□ 0.02
CHD1L-203ENST00000369259 SUSD5O60279 629 aa15.19■□□□□ 0.02
CHD1L-203ENST00000369259 SDC3O75056 442 aa15.19■□□□□ 0.02
CHD1L-203ENST00000369259 KDM4BO94953 1096 aa15.19■□□□□ 0.02
CHD1L-203ENST00000369259 ACP5P13686 325 aa15.19■□□□□ 0.02
CHD1L-203ENST00000369259 TAS2R50P59544 299 aa15.19■□□□□ 0.02
CHD1L-203ENST00000369259 RAP2BP61225 183 aa15.19■□□□□ 0.02
CHD1L-203ENST00000369259 AP1S1P61966 158 aa15.19■□□□□ 0.02
CHD1L-203ENST00000369259 POLR2GP62487 172 aaKnown RBP eCLIP15.19■□□□□ 0.02
CHD1L-203ENST00000369259 PLEKHS1Q5SXH7 462 aa15.19■□□□□ 0.02
CHD1L-203ENST00000369259 TPRA1Q86W33 373 aa15.19■□□□□ 0.02
CHD1L-203ENST00000369259 PAQR7Q86WK9 346 aa15.19■□□□□ 0.02
CHD1L-203ENST00000369259 OR11G2Q8NGC1 345 aa15.19■□□□□ 0.02
CHD1L-203ENST00000369259 HAVCR2Q8TDQ0 301 aa15.19■□□□□ 0.02
CHD1L-203ENST00000369259 UPF1Q92900 1129 aaKnown RBP eCLIP15.19■□□□□ 0.02
CHD1L-203ENST00000369259 MYNNQ9NPC7 610 aa15.19■□□□□ 0.02
CHD1L-203ENST00000369259 ADARB2Q9NS39 739 aaKnown RBP15.19■□□□□ 0.02
CHD1L-203ENST00000369259 MAN2C1Q9NTJ4 1040 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms