RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 CXCR6O00574 342 aa8.18□□□□□ -1.1
TPM3-213ENST00000368545 P2RX6O15547 441 aa8.18□□□□□ -1.1
TPM3-213ENST00000368545 KRT75O95678 551 aa8.18□□□□□ -1.1
TPM3-213ENST00000368545 STATHP02808 62 aa8.18□□□□□ -1.1
TPM3-213ENST00000368545 ALPPL2P10696 532 aa8.18□□□□□ -1.1
TPM3-213ENST00000368545 PVRP15151 417 aa8.18□□□□□ -1.1
TPM3-213ENST00000368545 ST6GAL1P15907 406 aa8.18□□□□□ -1.1
TPM3-213ENST00000368545 UQCRC2P22695 453 aa8.18□□□□□ -1.1
TPM3-213ENST00000368545 CERS1P27544 350 aa8.18□□□□□ -1.1
TPM3-213ENST00000368545 EPHA8P29322 1005 aaPredicted RBP8.18□□□□□ -1.1
TPM3-213ENST00000368545 RAB8AP61006 207 aa8.18□□□□□ -1.1
TPM3-213ENST00000368545 PPP1CAP62136 330 aa8.18□□□□□ -1.1
TPM3-213ENST00000368545 SKP1P63208 163 aa8.18□□□□□ -1.1
TPM3-213ENST00000368545 BTN3A2P78410 334 aa8.18□□□□□ -1.1
TPM3-213ENST00000368545 NR1D2Q14995 579 aa8.18□□□□□ -1.1
TPM3-213ENST00000368545 C19orf54Q5BKX5 351 aa8.18□□□□□ -1.1
TPM3-213ENST00000368545 C1QTNF12Q5T7M4 302 aa8.18□□□□□ -1.1
TPM3-213ENST00000368545 FRMPD2BQ6IN97 320 aa8.18□□□□□ -1.1
TPM3-213ENST00000368545 NIPAL1Q6NVV3 410 aa8.18□□□□□ -1.1
TPM3-213ENST00000368545 DHRS13Q6UX07 377 aa8.18□□□□□ -1.1
TPM3-213ENST00000368545 GALNT5Q7Z7M9 940 aa8.18□□□□□ -1.1
TPM3-213ENST00000368545 SAMD14Q8IZD0 417 aaPredicted RBP8.18□□□□□ -1.1
TPM3-213ENST00000368545 ADGRG5Q8IZF4 528 aa8.18□□□□□ -1.1
TPM3-213ENST00000368545 CSNK1A1LQ8N752 337 aa8.18□□□□□ -1.1
TPM3-213ENST00000368545 OR6C4Q8NGE1 309 aa8.18□□□□□ -1.1
TPM3-213ENST00000368545 OR52N2Q8NGI0 321 aa8.18□□□□□ -1.1
TPM3-213ENST00000368545 CANT1Q8WVQ1 401 aa8.18□□□□□ -1.1
TPM3-213ENST00000368545 FIG4Q92562 907 aa8.18□□□□□ -1.1
TPM3-213ENST00000368545 SEMA4CQ9C0C4 833 aa8.18□□□□□ -1.1
TPM3-213ENST00000368545 LANCL2Q9NS86 450 aa8.18□□□□□ -1.1
TPM3-213ENST00000368545 GIMAP4Q9NUV9 329 aa8.18□□□□□ -1.1
TPM3-213ENST00000368545 LRIT1Q9P2V4 623 aa8.18□□□□□ -1.1
TPM3-213ENST00000368545 UTS2RQ9UKP6 389 aa8.18□□□□□ -1.1
TPM3-213ENST00000368545 PSME2Q9UL46 239 aa8.18□□□□□ -1.1
TPM3-213ENST00000368545 USP22Q9UPT9 525 aa8.18□□□□□ -1.1
TPM3-213ENST00000368545 ENTPD4Q9Y227 616 aa8.18□□□□□ -1.1
TPM3-213ENST00000368545 C15orf41Q9Y2V0 281 aa8.18□□□□□ -1.1
TPM3-213ENST00000368545 PRSS29PA6NIE9 313 aa8.17□□□□□ -1.1
TPM3-213ENST00000368545 PROM1O43490 865 aa8.17□□□□□ -1.1
TPM3-213ENST00000368545 DUX1O43812 170 aa8.17□□□□□ -1.1
TPM3-213ENST00000368545 PEX1O43933 1283 aa8.17□□□□□ -1.1
TPM3-213ENST00000368545 SRPX2O60687 465 aaPredicted RBP8.17□□□□□ -1.1
TPM3-213ENST00000368545 AIFM1O95831 613 aa8.17□□□□□ -1.1
TPM3-213ENST00000368545 IGLV1-40P01703 118 aa8.17□□□□□ -1.1
TPM3-213ENST00000368545 NR2F6P10588 404 aa8.17□□□□□ -1.1
TPM3-213ENST00000368545 NCK1P16333 377 aa8.17□□□□□ -1.1
TPM3-213ENST00000368545 ALOX12P18054 663 aa8.17□□□□□ -1.1
TPM3-213ENST00000368545 IL1RNP18510 177 aa8.17□□□□□ -1.1
TPM3-213ENST00000368545 EFNA1P20827 205 aaPredicted RBP8.17□□□□□ -1.1
TPM3-213ENST00000368545 SOAT1P35610 550 aa8.17□□□□□ -1.1
TPM3-213ENST00000368545 CTXN1P60606 82 aa8.17□□□□□ -1.1
TPM3-213ENST00000368545 TNFRSF17Q02223 184 aa8.17□□□□□ -1.1
TPM3-213ENST00000368545 VEZF1Q14119 521 aa8.17□□□□□ -1.1
TPM3-213ENST00000368545 RGNQ15493 299 aa8.17□□□□□ -1.1
TPM3-213ENST00000368545 TRIP10Q15642 601 aa8.17□□□□□ -1.1
TPM3-213ENST00000368545 OGFRL1Q5TC84 451 aaPredicted RBP8.17□□□□□ -1.1
TPM3-213ENST00000368545 HES3Q5TGS1 186 aa8.17□□□□□ -1.1
TPM3-213ENST00000368545 SLC48A1Q6P1K1 146 aa8.17□□□□□ -1.1
TPM3-213ENST00000368545 ETV3LQ6ZN32 361 aa8.17□□□□□ -1.1
TPM3-213ENST00000368545 MMP21Q8N119 569 aa8.17□□□□□ -1.1
TPM3-213ENST00000368545 EID3Q8N140 333 aa8.17□□□□□ -1.1
TPM3-213ENST00000368545 SLC25A45Q8N413 288 aa8.17□□□□□ -1.1
TPM3-213ENST00000368545 AMER3Q8N944 861 aa8.17□□□□□ -1.1
TPM3-213ENST00000368545 DTX3Q8N9I9 347 aa8.17□□□□□ -1.1
TPM3-213ENST00000368545 PAPD5Q8NDF8 572 aaKnown RBP8.17□□□□□ -1.1
TPM3-213ENST00000368545 PSMA8Q8TAA3 256 aa8.17□□□□□ -1.1
TPM3-213ENST00000368545 NCLNQ969V3 563 aa8.17□□□□□ -1.1
TPM3-213ENST00000368545 FAM162AQ96A26 154 aa8.17□□□□□ -1.1
TPM3-213ENST00000368545 EXOSC8Q96B26 276 aaKnown RBP8.17□□□□□ -1.1
TPM3-213ENST00000368545 SLCO4A1Q96BD0 722 aa8.17□□□□□ -1.1
TPM3-213ENST00000368545 UGT2B28Q9BY64 529 aa8.17□□□□□ -1.1
TPM3-213ENST00000368545 VCXQ9H320 206 aa8.17□□□□□ -1.1
TPM3-213ENST00000368545 YY1AP1Q9H869 796 aa8.17□□□□□ -1.1
TPM3-213ENST00000368545 LYRM4Q9HD34 91 aa8.17□□□□□ -1.1
TPM3-213ENST00000368545 SLC35C2Q9NQQ7 365 aa8.17□□□□□ -1.1
TPM3-213ENST00000368545 OLAHQ9NV23 265 aa8.17□□□□□ -1.1
TPM3-213ENST00000368545 AURKCQ9UQB9 309 aa8.17□□□□□ -1.1
TPM3-213ENST00000368545 CLCA2Q9UQC9 943 aa8.17□□□□□ -1.1
TPM3-213ENST00000368545 ERVK-11Q9UQG0 969 aa8.17□□□□□ -1.1
TPM3-213ENST00000368545 ATG4BQ9Y4P1 393 aa8.17□□□□□ -1.1
TPM3-213ENST00000368545 SLC22A7Q9Y694 548 aa8.17□□□□□ -1.1
TPM3-213ENST00000368545 RNF215Q9Y6U7 377 aa8.17□□□□□ -1.1
TPM3-213ENST00000368545 SPACA6W5XKT8 324 aa8.17□□□□□ -1.1
TPM3-213ENST00000368545 LOC105369274A0A096LPK9 316 aa8.17□□□□□ -1.1
TPM3-213ENST00000368545 LOC102723532A0A0G2JNH3 316 aa8.17□□□□□ -1.1
TPM3-213ENST00000368545 A0A1B0GTQ1 180 aa8.17□□□□□ -1.1
TPM3-213ENST00000368545 NUDT19A8MXV4 375 aa8.17□□□□□ -1.1
TPM3-213ENST00000368545 CREG1O75629 220 aa8.17□□□□□ -1.1
TPM3-213ENST00000368545 PNLIPP16233 465 aa8.17□□□□□ -1.1
TPM3-213ENST00000368545 TLX1P31314 330 aaPredicted RBP8.17□□□□□ -1.1
TPM3-213ENST00000368545 CHI3L1P36222 383 aaPredicted RBP8.17□□□□□ -1.1
TPM3-213ENST00000368545 BNC1Q01954 994 aa8.17□□□□□ -1.1
TPM3-213ENST00000368545 RBBP4Q09028 425 aa8.17□□□□□ -1.1
TPM3-213ENST00000368545 VMACQ2NL98 169 aa8.17□□□□□ -1.1
TPM3-213ENST00000368545 FAM98BQ52LJ0 330 aaKnown RBP8.17□□□□□ -1.1
TPM3-213ENST00000368545 KLHL17Q6TDP4 642 aa8.17□□□□□ -1.1
TPM3-213ENST00000368545 ANGPTL8Q6UXH0 198 aa8.17□□□□□ -1.1
TPM3-213ENST00000368545 SLC30A8Q8IWU4 369 aa8.17□□□□□ -1.1
TPM3-213ENST00000368545 OR4N4Q8N0Y3 316 aa8.17□□□□□ -1.1
TPM3-213ENST00000368545 ZCCHC10Q8TBK6 192 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms