RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 EFNA4P52798 201 aa12.99□□□□□ -0.33
VAMP4-202ENST00000367740 ARFIP1P53367 373 aa12.99□□□□□ -0.33
VAMP4-202ENST00000367740 GANABQ14697 944 aaKnown RBP12.99□□□□□ -0.33
VAMP4-202ENST00000367740 TEDDM1Q5T9Z0 273 aa12.99□□□□□ -0.33
VAMP4-202ENST00000367740 CYP20A1Q6UW02 462 aa12.99□□□□□ -0.33
VAMP4-202ENST00000367740 TFAP2EQ6VUC0 442 aa12.99□□□□□ -0.33
VAMP4-202ENST00000367740 MUC15Q8N387 334 aa12.99□□□□□ -0.33
VAMP4-202ENST00000367740 OR4K14Q8NGD5 310 aa12.99□□□□□ -0.33
VAMP4-202ENST00000367740 HUS1BQ8NHY5 278 aa12.99□□□□□ -0.33
VAMP4-202ENST00000367740 GCDHQ92947 438 aaPredicted RBP12.99□□□□□ -0.33
VAMP4-202ENST00000367740 NXNL1Q96CM4 212 aa12.99□□□□□ -0.33
VAMP4-202ENST00000367740 CERS2Q96G23 380 aa12.99□□□□□ -0.33
VAMP4-202ENST00000367740 CENPKQ9BS16 269 aa12.99□□□□□ -0.33
VAMP4-202ENST00000367740 BRINP2Q9C0B6 783 aa12.99□□□□□ -0.33
VAMP4-202ENST00000367740 BHLHE41Q9C0J9 482 aaPredicted RBP12.99□□□□□ -0.33
VAMP4-202ENST00000367740 DDX31Q9H8H2 851 aaKnown RBP12.99□□□□□ -0.33
VAMP4-202ENST00000367740 SMYD2Q9NRG4 433 aa12.99□□□□□ -0.33
VAMP4-202ENST00000367740 GLRX2Q9NS18 164 aa12.99□□□□□ -0.33
VAMP4-202ENST00000367740 NPAP1Q9NZP6 1156 aa12.99□□□□□ -0.33
VAMP4-202ENST00000367740 PPP4R1LQ9P1A2 415 aa12.99□□□□□ -0.33
VAMP4-202ENST00000367740 AP4B1Q9Y6B7 739 aa12.99□□□□□ -0.33
VAMP4-202ENST00000367740 EIF1AYO14602 144 aaKnown RBP12.98□□□□□ -0.33
VAMP4-202ENST00000367740 TMPRSS2O15393 492 aa12.98□□□□□ -0.33
VAMP4-202ENST00000367740 TUBBP07437 444 aa12.98□□□□□ -0.33
VAMP4-202ENST00000367740 EMDP50402 254 aa12.98□□□□□ -0.33
VAMP4-202ENST00000367740 MAP4K2Q12851 820 aa12.98□□□□□ -0.33
VAMP4-202ENST00000367740 SLMAPQ14BN4 828 aa12.98□□□□□ -0.33
VAMP4-202ENST00000367740 MIDNQ504T8 468 aa12.98□□□□□ -0.33
VAMP4-202ENST00000367740 CCDC25Q86WR0 208 aa12.98□□□□□ -0.33
VAMP4-202ENST00000367740 OR52B6Q8NGF0 335 aa12.98□□□□□ -0.33
VAMP4-202ENST00000367740 OR52R1Q8NGF1 315 aa12.98□□□□□ -0.33
VAMP4-202ENST00000367740 OR10D3Q8NH80 312 aa12.98□□□□□ -0.33
VAMP4-202ENST00000367740 KISS1RQ969F8 398 aaPredicted RBP12.98□□□□□ -0.33
VAMP4-202ENST00000367740 MTERF1Q99551 399 aaKnown RBP12.98□□□□□ -0.33
VAMP4-202ENST00000367740 DHRS9Q9BPW9 319 aa12.98□□□□□ -0.33
VAMP4-202ENST00000367740 PIMREGQ9BSJ6 248 aa12.98□□□□□ -0.33
VAMP4-202ENST00000367740 LRRC1Q9BTT6 524 aa12.98□□□□□ -0.33
VAMP4-202ENST00000367740 MED11Q9P086 117 aa12.98□□□□□ -0.33
VAMP4-202ENST00000367740 MCTS1Q9ULC4 181 aaKnown RBP12.98□□□□□ -0.33
VAMP4-202ENST00000367740 GPR55Q9Y2T6 319 aaPredicted RBP12.98□□□□□ -0.33
VAMP4-202ENST00000367740 ARFGEF3Q5TH69 2177 aa12.98□□□□□ -0.33
VAMP4-202ENST00000367740 GOLGA8QA0A0J9YX86 632 aa12.97□□□□□ -0.33
VAMP4-202ENST00000367740 ESYT3A0FGR9 886 aa12.97□□□□□ -0.33
VAMP4-202ENST00000367740 GOLGA8OA6NCC3 632 aa12.97□□□□□ -0.33
VAMP4-202ENST00000367740 SHISA8B8ZZ34 492 aa12.97□□□□□ -0.33
VAMP4-202ENST00000367740 GOLGA8NF8WBI6 632 aa12.97□□□□□ -0.33
VAMP4-202ENST00000367740 GOLGA8RI6L899 631 aa12.97□□□□□ -0.33
VAMP4-202ENST00000367740 SCO2O43819 266 aa12.97□□□□□ -0.33
VAMP4-202ENST00000367740 CCNT2O60583 730 aaKnown RBP12.97□□□□□ -0.33
VAMP4-202ENST00000367740 BANF1O75531 89 aa12.97□□□□□ -0.33
VAMP4-202ENST00000367740 KRT14P02533 472 aa12.97□□□□□ -0.33
VAMP4-202ENST00000367740 GBAP04062 536 aa12.97□□□□□ -0.33
VAMP4-202ENST00000367740 PORP16435 677 aaPredicted RBP12.97□□□□□ -0.33
VAMP4-202ENST00000367740 EFR3AQ14156 821 aa12.97□□□□□ -0.33
VAMP4-202ENST00000367740 SPANXN3Q5MJ09 141 aa12.97□□□□□ -0.33
VAMP4-202ENST00000367740 SULT1C3Q6IMI6 304 aa12.97□□□□□ -0.33
VAMP4-202ENST00000367740 GALNT10Q86SR1 603 aa12.97□□□□□ -0.33
VAMP4-202ENST00000367740 C1GALT1C1Q96EU7 318 aa12.97□□□□□ -0.33
VAMP4-202ENST00000367740 ADGRG7Q96K78 797 aa12.97□□□□□ -0.33
VAMP4-202ENST00000367740 DDX47Q9H0S4 455 aaKnown RBP12.97□□□□□ -0.33
VAMP4-202ENST00000367740 PLAC1Q9HBJ0 212 aa12.97□□□□□ -0.33
VAMP4-202ENST00000367740 TMEFF2Q9UIK5 374 aaPredicted RBP12.97□□□□□ -0.33
VAMP4-202ENST00000367740 NDUFS8O00217 210 aa12.96□□□□□ -0.33
VAMP4-202ENST00000367740 ADAP00813 363 aa12.96□□□□□ -0.33
VAMP4-202ENST00000367740 ATP1B1P05026 303 aa12.96□□□□□ -0.33
VAMP4-202ENST00000367740 COL6A2P12110 1019 aa12.96□□□□□ -0.33
VAMP4-202ENST00000367740 ZNF23P17027 643 aa12.96□□□□□ -0.33
VAMP4-202ENST00000367740 IL12BP29460 328 aa12.96□□□□□ -0.33
VAMP4-202ENST00000367740 EVI2BP34910 448 aa12.96□□□□□ -0.33
VAMP4-202ENST00000367740 PIK3CBP42338 1070 aa12.96□□□□□ -0.33
VAMP4-202ENST00000367740 PDLIM4P50479 330 aa12.96□□□□□ -0.33
VAMP4-202ENST00000367740 CORO7P57737 925 aa12.96□□□□□ -0.33
VAMP4-202ENST00000367740 TAS2R39P59534 338 aa12.96□□□□□ -0.33
VAMP4-202ENST00000367740 SPOCK1Q08629 439 aa12.96□□□□□ -0.33
VAMP4-202ENST00000367740 PPA1Q15181 289 aa12.96□□□□□ -0.33
VAMP4-202ENST00000367740 TMEM44Q2T9K0 475 aa12.96□□□□□ -0.33
VAMP4-202ENST00000367740 CDKL4Q5MAI5 379 aa12.96□□□□□ -0.33
VAMP4-202ENST00000367740 GRHL2Q6ISB3 625 aa12.96□□□□□ -0.33
VAMP4-202ENST00000367740 B3GLCTQ6Y288 498 aa12.96□□□□□ -0.33
VAMP4-202ENST00000367740 LARP4Q71RC2 724 aaKnown RBP eCLIP12.96□□□□□ -0.33
VAMP4-202ENST00000367740 LRRC70Q7Z2Q7 622 aa12.96□□□□□ -0.33
VAMP4-202ENST00000367740 NUFIP2Q7Z417 695 aaKnown RBP12.96□□□□□ -0.33
VAMP4-202ENST00000367740 EXOC3L1Q86VI1 746 aa12.96□□□□□ -0.33
VAMP4-202ENST00000367740 NUDT13Q86X67 352 aa12.96□□□□□ -0.33
VAMP4-202ENST00000367740 FBXL14Q8N1E6 418 aa12.96□□□□□ -0.33
VAMP4-202ENST00000367740 PLD6Q8N2A8 252 aaKnown RBP12.96□□□□□ -0.33
VAMP4-202ENST00000367740 NAT8LQ8N9F0 302 aa12.96□□□□□ -0.33
VAMP4-202ENST00000367740 PDPRQ8NCN5 879 aa12.96□□□□□ -0.33
VAMP4-202ENST00000367740 BTBD9Q96Q07 612 aa12.96□□□□□ -0.33
VAMP4-202ENST00000367740 NAP1L3Q99457 506 aaPredicted RBP12.96□□□□□ -0.33
VAMP4-202ENST00000367740 FAM95CA0A1B0GW59 222 aa12.95□□□□□ -0.34
VAMP4-202ENST00000367740 SMAD9O15198 467 aaKnown RBP12.95□□□□□ -0.34
VAMP4-202ENST00000367740 CXCL13O43927 109 aa12.95□□□□□ -0.34
VAMP4-202ENST00000367740 NME6O75414 186 aaPredicted RBP12.95□□□□□ -0.34
VAMP4-202ENST00000367740 TTC4O95801 387 aa12.95□□□□□ -0.34
VAMP4-202ENST00000367740 FGGP02679 453 aa12.95□□□□□ -0.34
VAMP4-202ENST00000367740 CT45A8P0DMV1 189 aa12.95□□□□□ -0.34
VAMP4-202ENST00000367740 CT45A9P0DMV2 189 aa12.95□□□□□ -0.34
VAMP4-202ENST00000367740 GPX6P59796 221 aa12.95□□□□□ -0.34
VAMP4-202ENST00000367740 DUSP2Q05923 314 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms